Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 1700016P04Rik-201ENSMUST00000186770 429 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Srp54bE9PXC0 1700031M16Rik-204ENSMUST00000189724 824 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
Srp54bE9PXC0 Gm19280-201ENSMUST00000190191 205 ntBASIC4.84□□□□□ -1.63
Srp54bE9PXC0 Gm29527-201ENSMUST00000190722 622 ntTSL 5 BASIC4.84□□□□□ -1.63
Srp54bE9PXC0 Vmn1r82-202ENSMUST00000191002 918 ntBASIC4.84□□□□□ -1.63
Srp54bE9PXC0 1700031M16Rik-207ENSMUST00000191513 847 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
Srp54bE9PXC0 1700006P03Rik-201ENSMUST00000191810 409 ntBASIC4.84□□□□□ -1.63
Srp54bE9PXC0 Ube2l3-ps1-201ENSMUST00000199777 436 ntBASIC4.84□□□□□ -1.63
Srp54bE9PXC0 Gm44738-201ENSMUST00000206393 371 ntTSL 2 BASIC4.84□□□□□ -1.63
Srp54bE9PXC0 Olfr1455-ps1-201ENSMUST00000208608 771 ntBASIC4.84□□□□□ -1.63
Srp54bE9PXC0 Gm45610-201ENSMUST00000209227 784 ntBASIC4.84□□□□□ -1.63
Srp54bE9PXC0 Olfr1077-ps1-201ENSMUST00000213225 1212 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.63
Srp54bE9PXC0 Gm32283-201ENSMUST00000218861 549 ntTSL 5 BASIC4.84□□□□□ -1.63
Srp54bE9PXC0 Gm12888-201ENSMUST00000097905 1181 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Srp54bE9PXC0 Nfyc-202ENSMUST00000097906 1008 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Srp54bE9PXC0 Vmn1r125-201ENSMUST00000098739 924 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Srp54bE9PXC0 Dync2h1-201ENSMUST00000048417 13972 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.63
Srp54bE9PXC0 Vmn1r185-205ENSMUST00000227461 5318 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Srp54bE9PXC0 Vmn1r184-204ENSMUST00000227534 4807 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Srp54bE9PXC0 Gcnt3-201ENSMUST00000034751 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
Srp54bE9PXC0 Olfr1271-202ENSMUST00000216383 6613 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.64
Srp54bE9PXC0 Gm10436-201ENSMUST00000071580 1883 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
Srp54bE9PXC0 Crebrf-201ENSMUST00000062519 7462 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Srp54bE9PXC0 Zfy1-201ENSMUST00000065545 2783 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Srp54bE9PXC0 Tmem167-201ENSMUST00000012566 1541 ntTSL 5 BASIC4.83□□□□□ -1.64
Srp54bE9PXC0 Olfr372-202ENSMUST00000215324 3542 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Srp54bE9PXC0 Erbin-204ENSMUST00000169083 5435 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
Srp54bE9PXC0 AC102431.1-201ENSMUST00000223773 1449 ntBASIC4.83□□□□□ -1.64
Srp54bE9PXC0 Vmn1r43-204ENSMUST00000226983 12805 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Srp54bE9PXC0 Trav8n-2-201ENSMUST00000103632 408 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Srp54bE9PXC0 Rps12-ps26-201ENSMUST00000117751 333 ntBASIC4.83□□□□□ -1.64
Srp54bE9PXC0 Gm11633-201ENSMUST00000118176 444 ntBASIC4.83□□□□□ -1.64
Srp54bE9PXC0 Gm15168-201ENSMUST00000121057 316 ntBASIC4.83□□□□□ -1.64
Srp54bE9PXC0 Gm26034-201ENSMUST00000158154 116 ntBASIC4.83□□□□□ -1.64
Srp54bE9PXC0 Mir1947-201ENSMUST00000158235 85 ntBASIC4.83□□□□□ -1.64
Srp54bE9PXC0 Gm25839-201ENSMUST00000158921 103 ntBASIC4.83□□□□□ -1.64
Srp54bE9PXC0 Mir6344-201ENSMUST00000183462 104 ntBASIC4.83□□□□□ -1.64
Srp54bE9PXC0 Mir1957b-201ENSMUST00000184608 123 ntBASIC4.83□□□□□ -1.64
Srp54bE9PXC0 Hmgn3-205ENSMUST00000187193 855 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
Srp54bE9PXC0 Ly6e-215ENSMUST00000191436 1122 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Srp54bE9PXC0 Gm37492-201ENSMUST00000191948 376 ntBASIC4.83□□□□□ -1.64
Srp54bE9PXC0 Ralyl-205ENSMUST00000192209 662 ntTSL 3 BASIC4.83□□□□□ -1.64
Srp54bE9PXC0 Gm38046-201ENSMUST00000192733 550 ntBASIC4.83□□□□□ -1.64
Srp54bE9PXC0 Gm38334-201ENSMUST00000195060 313 ntBASIC4.83□□□□□ -1.64
Srp54bE9PXC0 Gm8458-201ENSMUST00000196658 819 ntBASIC4.83□□□□□ -1.64
Srp54bE9PXC0 Gm43344-201ENSMUST00000198723 1229 ntBASIC4.83□□□□□ -1.64
Srp54bE9PXC0 Gm18100-201ENSMUST00000200897 452 ntBASIC4.83□□□□□ -1.64
Srp54bE9PXC0 Gm43700-201ENSMUST00000200967 316 ntTSL 5 BASIC4.83□□□□□ -1.64
Srp54bE9PXC0 4930513D17Rik-203ENSMUST00000202800 1159 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Srp54bE9PXC0 E230029C05Rik-206ENSMUST00000208547 814 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Srp54bE9PXC0 Gm4928-201ENSMUST00000219622 850 ntBASIC4.83□□□□□ -1.64
Srp54bE9PXC0 Olfr813-201ENSMUST00000064893 933 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Srp54bE9PXC0 Rpl36a-ps1-201ENSMUST00000081987 449 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Srp54bE9PXC0 Gm25005-201ENSMUST00000083812 156 ntBASIC4.83□□□□□ -1.64
Srp54bE9PXC0 Olfr1111-201ENSMUST00000099860 940 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Srp54bE9PXC0 Gm15262-202ENSMUST00000207320 5010 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Srp54bE9PXC0 Gm29112-201ENSMUST00000188962 3487 ntBASIC4.83□□□□□ -1.64
Srp54bE9PXC0 Vmn2r110-201ENSMUST00000169559 2577 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Srp54bE9PXC0 Fign-203ENSMUST00000131615 9734 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Srp54bE9PXC0 Gm45129-201ENSMUST00000208444 2224 ntBASIC4.82□□□□□ -1.64
Srp54bE9PXC0 Olfr481-202ENSMUST00000213601 5247 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Srp54bE9PXC0 Il13ra2-202ENSMUST00000112827 1536 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Srp54bE9PXC0 Gm19136-201ENSMUST00000190706 2067 ntBASIC4.82□□□□□ -1.64
Srp54bE9PXC0 Gm5715-201ENSMUST00000196854 1465 ntBASIC4.82□□□□□ -1.64
Srp54bE9PXC0 Glcci1-203ENSMUST00000161494 3248 ntTSL 2 BASIC4.82□□□□□ -1.64
Srp54bE9PXC0 Emcn-201ENSMUST00000119475 1357 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
Srp54bE9PXC0 Prame-201ENSMUST00000033786 1395 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Srp54bE9PXC0 BB019430-202ENSMUST00000218015 1320 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Srp54bE9PXC0 Nexn-212ENSMUST00000199470 2392 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
Srp54bE9PXC0 Gm14444-201ENSMUST00000109069 919 ntTSL 2 BASIC4.82□□□□□ -1.64
Srp54bE9PXC0 Gm12245-201ENSMUST00000117266 357 ntBASIC4.82□□□□□ -1.64
Srp54bE9PXC0 Gm12520-201ENSMUST00000117493 316 ntBASIC4.82□□□□□ -1.64
Srp54bE9PXC0 Gm12752-201ENSMUST00000121657 811 ntBASIC4.82□□□□□ -1.64
Srp54bE9PXC0 Gm14408-202ENSMUST00000126726 279 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Srp54bE9PXC0 Gm12259-201ENSMUST00000138391 328 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Srp54bE9PXC0 Gm13617-201ENSMUST00000155350 675 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Srp54bE9PXC0 Gm25665-201ENSMUST00000157695 110 ntBASIC4.82□□□□□ -1.64
Srp54bE9PXC0 Gm26352-201ENSMUST00000158223 125 ntBASIC4.82□□□□□ -1.64
Srp54bE9PXC0 Gm26404-201ENSMUST00000158498 109 ntBASIC4.82□□□□□ -1.64
Srp54bE9PXC0 Gm24664-201ENSMUST00000158939 100 ntBASIC4.82□□□□□ -1.64
Srp54bE9PXC0 Gm15508-201ENSMUST00000160330 325 ntBASIC4.82□□□□□ -1.64
Srp54bE9PXC0 Esp1-201ENSMUST00000161110 1049 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Srp54bE9PXC0 Gm16451-201ENSMUST00000173484 924 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Srp54bE9PXC0 1700031A10Rik-201ENSMUST00000174380 656 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Srp54bE9PXC0 Mir3058-201ENSMUST00000175126 91 ntBASIC4.82□□□□□ -1.64
Srp54bE9PXC0 Vmn2r-ps23-201ENSMUST00000178719 571 ntBASIC4.82□□□□□ -1.64
Srp54bE9PXC0 Gm26950-201ENSMUST00000182734 498 ntBASIC4.82□□□□□ -1.64
Srp54bE9PXC0 Gm29086-201ENSMUST00000186774 222 ntBASIC4.82□□□□□ -1.64
Srp54bE9PXC0 Gm29085-201ENSMUST00000187108 225 ntBASIC4.82□□□□□ -1.64
Srp54bE9PXC0 Trdv3-201ENSMUST00000198551 309 ntBASIC4.82□□□□□ -1.64
Srp54bE9PXC0 Gbp2-ps-201ENSMUST00000198870 1269 ntBASIC4.82□□□□□ -1.64
Srp54bE9PXC0 Gm45037-201ENSMUST00000207475 673 ntTSL 5 BASIC4.82□□□□□ -1.64
Srp54bE9PXC0 Olfr1434-203ENSMUST00000208197 1229 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Srp54bE9PXC0 Gm45236-201ENSMUST00000208632 229 ntBASIC4.82□□□□□ -1.64
Srp54bE9PXC0 Irf2-209ENSMUST00000210218 535 ntTSL 3 BASIC4.82□□□□□ -1.64
Srp54bE9PXC0 AC138284.2-201ENSMUST00000213982 567 ntBASIC4.82□□□□□ -1.64
Srp54bE9PXC0 Erich6b-201ENSMUST00000022579 869 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Srp54bE9PXC0 AC141884.1-201ENSMUST00000226327 636 ntBASIC4.82□□□□□ -1.64
Srp54bE9PXC0 Gnrhr-201ENSMUST00000031172 1211 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Srp54bE9PXC0 Olfr178-201ENSMUST00000058564 960 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms