Protein–RNA interactions for Protein: B1AYL1

Scn7a, Sodium channel protein, mousemouse

Predictions only

Length 1,681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn7aB1AYL1 Gm23133-201ENSMUST00000104255 135 ntBASIC5.71□□□□□ -1.5
Scn7aB1AYL1 Airn-203ENSMUST00000159791 485 ntTSL 3 BASIC5.71□□□□□ -1.5
Scn7aB1AYL1 Klk1b18-ps-201ENSMUST00000205780 167 ntBASIC5.71□□□□□ -1.5
Scn7aB1AYL1 AC154368.1-201ENSMUST00000223465 205 ntTSL 5 BASIC5.71□□□□□ -1.5
Scn7aB1AYL1 n-R5s160-201ENSMUST00000083096 120 ntBASIC5.71□□□□□ -1.5
Scn7aB1AYL1 n-R5s151-201ENSMUST00000083959 119 ntBASIC5.71□□□□□ -1.5
Scn7aB1AYL1 Abcc9-204ENSMUST00000111771 7499 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
Scn7aB1AYL1 4930444F02Rik-201ENSMUST00000215429 6871 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Scn7aB1AYL1 Olfr18-203ENSMUST00000212943 2896 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Scn7aB1AYL1 Gm2888-201ENSMUST00000170521 1758 ntAPPRIS P5 TSL 5 BASIC5.71□□□□□ -1.5
Scn7aB1AYL1 Olfr1341-203ENSMUST00000215117 4700 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Scn7aB1AYL1 Vmn1r42-203ENSMUST00000227279 4138 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Scn7aB1AYL1 Phf11d-201ENSMUST00000095157 2666 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Scn7aB1AYL1 Cd33-203ENSMUST00000205503 5728 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
Scn7aB1AYL1 Rasgrp3-201ENSMUST00000095204 4657 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Scn7aB1AYL1 Celf2-202ENSMUST00000100429 7491 ntAPPRIS P3 TSL 5 BASIC5.7□□□□□ -1.5
Scn7aB1AYL1 Rgs17-204ENSMUST00000131996 8107 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Scn7aB1AYL1 2310003L06Rik-201ENSMUST00000007601 1603 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Scn7aB1AYL1 Hspd1-ps2-201ENSMUST00000210003 1697 ntBASIC5.7□□□□□ -1.5
Scn7aB1AYL1 Clec1b-203ENSMUST00000112081 614 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Scn7aB1AYL1 Gm23215-201ENSMUST00000178153 121 ntBASIC5.7□□□□□ -1.5
Scn7aB1AYL1 Gm4832-202ENSMUST00000183295 375 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Scn7aB1AYL1 Gm27899-201ENSMUST00000184715 64 ntBASIC5.7□□□□□ -1.5
Scn7aB1AYL1 Ikzf2-209ENSMUST00000191262 1146 ntTSL 5 BASIC5.7□□□□□ -1.5
Scn7aB1AYL1 Gm26691-203ENSMUST00000200444 479 ntTSL 3 BASIC5.7□□□□□ -1.5
Scn7aB1AYL1 Gm46401-202ENSMUST00000223425 803 ntTSL 5 BASIC5.7□□□□□ -1.5
Scn7aB1AYL1 Olfr1325-201ENSMUST00000054541 948 ntAPPRIS P2 BASIC5.7□□□□□ -1.5
Scn7aB1AYL1 Mir412-201ENSMUST00000083636 80 ntBASIC5.7□□□□□ -1.5
Scn7aB1AYL1 Rag2-202ENSMUST00000111227 1857 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Scn7aB1AYL1 Gria4-204ENSMUST00000212533 5207 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Scn7aB1AYL1 Gm38105-201ENSMUST00000192112 2621 ntBASIC5.7□□□□□ -1.5
Scn7aB1AYL1 Zfp106-211ENSMUST00000171215 6391 ntTSL 5 BASIC5.7□□□□□ -1.5
Scn7aB1AYL1 Amd2-201ENSMUST00000080898 3218 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Scn7aB1AYL1 Gm19176-201ENSMUST00000222149 1831 ntBASIC5.7□□□□□ -1.5
Scn7aB1AYL1 Gm37244-201ENSMUST00000191748 1981 ntBASIC5.7□□□□□ -1.5
Scn7aB1AYL1 A930017M01Rik-205ENSMUST00000227721 4167 ntBASIC5.7□□□□□ -1.5
Scn7aB1AYL1 Gm26418-201ENSMUST00000104275 137 ntBASIC5.69□□□□□ -1.5
Scn7aB1AYL1 Gm23226-201ENSMUST00000116927 103 ntBASIC5.69□□□□□ -1.5
Scn7aB1AYL1 Gm25292-201ENSMUST00000122797 322 ntBASIC5.69□□□□□ -1.5
Scn7aB1AYL1 Spin2-ps4-201ENSMUST00000126395 762 ntBASIC5.69□□□□□ -1.5
Scn7aB1AYL1 Spin2-ps3-201ENSMUST00000148147 762 ntBASIC5.69□□□□□ -1.5
Scn7aB1AYL1 Ly6a-203ENSMUST00000187171 853 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Scn7aB1AYL1 1700017N19Rik-204ENSMUST00000188736 1709 ntTSL 5 BASIC5.69□□□□□ -1.5
Scn7aB1AYL1 CT030194.1-201ENSMUST00000225507 532 ntBASIC5.69□□□□□ -1.5
Scn7aB1AYL1 AC170999.2-201ENSMUST00000226223 264 ntBASIC5.69□□□□□ -1.5
Scn7aB1AYL1 Il6-201ENSMUST00000026845 1141 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Scn7aB1AYL1 Olfr918-201ENSMUST00000055099 978 ntAPPRIS P2 BASIC5.69□□□□□ -1.5
Scn7aB1AYL1 Olfr206-201ENSMUST00000084791 1005 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Scn7aB1AYL1 Olfr410-203ENSMUST00000214490 5075 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Scn7aB1AYL1 Gpm6a-201ENSMUST00000033915 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Scn7aB1AYL1 Fat2-201ENSMUST00000068853 14528 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Scn7aB1AYL1 Tlr13-201ENSMUST00000040065 4060 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Scn7aB1AYL1 Gm20667-201ENSMUST00000175674 1930 ntBASIC5.69□□□□□ -1.5
Scn7aB1AYL1 4930544M13Rik-202ENSMUST00000181553 1403 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Scn7aB1AYL1 Nlrp1b-203ENSMUST00000108515 4131 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Scn7aB1AYL1 Larp4-201ENSMUST00000057632 6527 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Scn7aB1AYL1 Tcf12-207ENSMUST00000183918 4308 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Scn7aB1AYL1 Gm3086-201ENSMUST00000110560 620 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Scn7aB1AYL1 Ttc29-203ENSMUST00000117845 650 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Scn7aB1AYL1 Gm13618-201ENSMUST00000128859 384 ntTSL 5 BASIC5.69□□□□□ -1.5
Scn7aB1AYL1 4930445B16Rik-201ENSMUST00000170085 1123 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Scn7aB1AYL1 Gm22120-201ENSMUST00000175590 70 ntBASIC5.69□□□□□ -1.5
Scn7aB1AYL1 Gm5473-201ENSMUST00000179326 642 ntBASIC5.69□□□□□ -1.5
Scn7aB1AYL1 Gm44389-201ENSMUST00000203795 182 ntBASIC5.69□□□□□ -1.5
Scn7aB1AYL1 AC122188.1-201ENSMUST00000217534 312 ntBASIC5.69□□□□□ -1.5
Scn7aB1AYL1 Gm18180-201ENSMUST00000187562 1484 ntBASIC5.68□□□□□ -1.5
Scn7aB1AYL1 Gm3972-201ENSMUST00000173960 2861 ntBASIC5.68□□□□□ -1.5
Scn7aB1AYL1 Gm43605-201ENSMUST00000199663 3426 ntBASIC5.68□□□□□ -1.5
Scn7aB1AYL1 Gm43594-201ENSMUST00000201153 3442 ntBASIC5.68□□□□□ -1.5
Scn7aB1AYL1 Olfr726-205ENSMUST00000215278 1324 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
Scn7aB1AYL1 Cenpe-201ENSMUST00000062893 7910 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Scn7aB1AYL1 Olfr714-203ENSMUST00000214429 4324 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Scn7aB1AYL1 Gm43164-201ENSMUST00000202529 2128 ntBASIC5.68□□□□□ -1.5
Scn7aB1AYL1 Vmn1r171-204ENSMUST00000226733 2918 ntAPPRIS ALT2 BASIC5.68□□□□□ -1.5
Scn7aB1AYL1 Zfp935-201ENSMUST00000076195 1631 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Scn7aB1AYL1 Gm7834-201ENSMUST00000117560 437 ntBASIC5.68□□□□□ -1.5
Scn7aB1AYL1 Gm9003-201ENSMUST00000121810 482 ntBASIC5.68□□□□□ -1.5
Scn7aB1AYL1 Gm13174-201ENSMUST00000126141 220 ntTSL 3 BASIC5.68□□□□□ -1.5
Scn7aB1AYL1 Gm16180-201ENSMUST00000128662 312 ntTSL 3 BASIC5.68□□□□□ -1.5
Scn7aB1AYL1 Gm11861-201ENSMUST00000141571 382 ntTSL 3 BASIC5.68□□□□□ -1.5
Scn7aB1AYL1 Sult2a4-202ENSMUST00000165167 964 ntAPPRIS P2 TSL 5 BASIC5.68□□□□□ -1.5
Scn7aB1AYL1 Vmn1r181-201ENSMUST00000181796 1080 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Scn7aB1AYL1 Gm18303-201ENSMUST00000190055 1176 ntBASIC5.68□□□□□ -1.5
Scn7aB1AYL1 Gm37050-201ENSMUST00000193464 466 ntBASIC5.68□□□□□ -1.5
Scn7aB1AYL1 Csn1s2a-202ENSMUST00000196585 762 ntAPPRIS ALT2 TSL 3 BASIC5.68□□□□□ -1.5
Scn7aB1AYL1 Gm44023-201ENSMUST00000203710 469 ntBASIC5.68□□□□□ -1.5
Scn7aB1AYL1 AC123944.2-201ENSMUST00000215290 382 ntBASIC5.68□□□□□ -1.5
Scn7aB1AYL1 Gm5548-201ENSMUST00000055878 397 ntBASIC5.68□□□□□ -1.5
Scn7aB1AYL1 Csn1s2a-201ENSMUST00000076379 920 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
Scn7aB1AYL1 Olfr782-201ENSMUST00000077024 945 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Scn7aB1AYL1 Gm7808-201ENSMUST00000082002 387 ntBASIC5.68□□□□□ -1.5
Scn7aB1AYL1 Olfr1043-202ENSMUST00000213886 1675 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Scn7aB1AYL1 Zan-201ENSMUST00000117564 16481 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Scn7aB1AYL1 Neb-201ENSMUST00000028320 10298 ntTSL 5 BASIC5.68□□□□□ -1.5
Scn7aB1AYL1 Olfr194-203ENSMUST00000216519 3705 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Scn7aB1AYL1 AC115970.1-201ENSMUST00000218910 1758 ntBASIC5.68□□□□□ -1.5
Scn7aB1AYL1 Platr25-204ENSMUST00000221996 2458 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
Scn7aB1AYL1 Dnajc13-203ENSMUST00000186788 6747 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Scn7aB1AYL1 Gm43302-201ENSMUST00000050011 4310 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Scn7aB1AYL1 Lrp1-201ENSMUST00000049149 14888 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 77.7 ms