Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Gm43466-201ENSMUST00000197836 5214 ntBASIC3.76□□□□□ -1.81
Col6a4A2AX52 Btbd35f7-201ENSMUST00000105007 1960 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
Col6a4A2AX52 Gm38243-201ENSMUST00000194737 1567 ntBASIC3.76□□□□□ -1.81
Col6a4A2AX52 Gm43920-201ENSMUST00000204953 2159 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
Col6a4A2AX52 Gm15518-201ENSMUST00000127115 2108 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
Col6a4A2AX52 Cd28-201ENSMUST00000027165 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
Col6a4A2AX52 Gm17131-201ENSMUST00000164420 3846 ntBASIC3.75□□□□□ -1.81
Col6a4A2AX52 Wdr64-201ENSMUST00000094288 3817 ntAPPRIS P2 TSL 5 BASIC3.75□□□□□ -1.81
Col6a4A2AX52 Tgif1-202ENSMUST00000118283 1388 ntAPPRIS ALT1 TSL 1 (best) BASIC3.75□□□□□ -1.81
Col6a4A2AX52 Gm43059-201ENSMUST00000202437 1388 ntBASIC3.75□□□□□ -1.81
Col6a4A2AX52 Zp3r-202ENSMUST00000128128 1926 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
Col6a4A2AX52 Olfr920-201ENSMUST00000074740 5711 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
Col6a4A2AX52 AI847159-202ENSMUST00000138431 952 ntTSL 2 BASIC3.75□□□□□ -1.81
Col6a4A2AX52 Gm4045-201ENSMUST00000204076 310 ntBASIC3.75□□□□□ -1.81
Col6a4A2AX52 Klk1b23-ps-201ENSMUST00000206347 345 ntBASIC3.75□□□□□ -1.81
Col6a4A2AX52 Gm45499-201ENSMUST00000211656 280 ntBASIC3.75□□□□□ -1.81
Col6a4A2AX52 Gm35371-201ENSMUST00000216204 579 ntTSL 5 BASIC3.75□□□□□ -1.81
Col6a4A2AX52 1700015C15Rik-201ENSMUST00000221465 374 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
Col6a4A2AX52 Vmn1r49-201ENSMUST00000071865 933 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
Col6a4A2AX52 Uba6-201ENSMUST00000039373 6590 ntAPPRIS P2 TSL 1 (best) BASIC3.75□□□□□ -1.81
Col6a4A2AX52 Gm15304-201ENSMUST00000122150 2640 ntBASIC3.75□□□□□ -1.81
Col6a4A2AX52 Ccr9-205ENSMUST00000180093 4239 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
Col6a4A2AX52 Vmn2r112-201ENSMUST00000097381 2574 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
Col6a4A2AX52 Tnfrsf26-202ENSMUST00000208124 3062 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
Col6a4A2AX52 Depdc1a-203ENSMUST00000120272 3323 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
Col6a4A2AX52 Gm2099-202ENSMUST00000223310 3341 ntBASIC3.75□□□□□ -1.81
Col6a4A2AX52 Gm29325-201ENSMUST00000190705 2528 ntBASIC3.75□□□□□ -1.81
Col6a4A2AX52 Gm23175-201ENSMUST00000104371 132 ntBASIC3.75□□□□□ -1.81
Col6a4A2AX52 Gm15783-201ENSMUST00000117521 633 ntBASIC3.75□□□□□ -1.81
Col6a4A2AX52 Gm15364-201ENSMUST00000119618 585 ntBASIC3.75□□□□□ -1.81
Col6a4A2AX52 Gm14687-201ENSMUST00000120206 363 ntBASIC3.75□□□□□ -1.81
Col6a4A2AX52 Gm14732-201ENSMUST00000121372 545 ntBASIC3.75□□□□□ -1.81
Col6a4A2AX52 2810403D21Rik-206ENSMUST00000151166 1107 ntTSL 3 BASIC3.75□□□□□ -1.81
Col6a4A2AX52 Lipo1-202ENSMUST00000178735 1188 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
Col6a4A2AX52 Gm10292-201ENSMUST00000183142 581 ntBASIC3.75□□□□□ -1.81
Col6a4A2AX52 Gm18487-201ENSMUST00000215826 878 ntBASIC3.75□□□□□ -1.81
Col6a4A2AX52 Gm8672-201ENSMUST00000221200 332 ntBASIC3.75□□□□□ -1.81
Col6a4A2AX52 Il2-201ENSMUST00000029275 1144 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
Col6a4A2AX52 Olfr186-201ENSMUST00000062380 1005 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
Col6a4A2AX52 n-R5s152-201ENSMUST00000093641 119 ntBASIC3.75□□□□□ -1.81
Col6a4A2AX52 Vmn2r-ps45-201ENSMUST00000174138 2435 ntBASIC3.75□□□□□ -1.81
Col6a4A2AX52 Gm2539-201ENSMUST00000180720 2411 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
Col6a4A2AX52 Eda2r-201ENSMUST00000037353 4752 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
Col6a4A2AX52 Vmn1r171-205ENSMUST00000226771 2718 ntAPPRIS ALT2 BASIC3.74□□□□□ -1.81
Col6a4A2AX52 2700089I24Rik-201ENSMUST00000190204 1827 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
Col6a4A2AX52 Acsm3-204ENSMUST00000106528 2755 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
Col6a4A2AX52 Cnot6l-202ENSMUST00000113005 3170 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
Col6a4A2AX52 Olfr1316-202ENSMUST00000213696 4184 ntAPPRIS ALT1 TSL 5 BASIC3.74□□□□□ -1.81
Col6a4A2AX52 Nxt2-202ENSMUST00000112913 2538 ntTSL 3 BASIC3.74□□□□□ -1.81
Col6a4A2AX52 Plcz1-201ENSMUST00000032356 2271 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
Col6a4A2AX52 Gm12340-201ENSMUST00000121617 462 ntBASIC3.74□□□□□ -1.81
Col6a4A2AX52 Gm25572-201ENSMUST00000157527 172 ntBASIC3.74□□□□□ -1.81
Col6a4A2AX52 Gm22120-201ENSMUST00000175590 70 ntBASIC3.74□□□□□ -1.81
Col6a4A2AX52 Gm4557-201ENSMUST00000185826 907 ntBASIC3.74□□□□□ -1.81
Col6a4A2AX52 Gm8708-201ENSMUST00000188500 906 ntBASIC3.74□□□□□ -1.81
Col6a4A2AX52 Gm29329-201ENSMUST00000189053 621 ntTSL 5 BASIC3.74□□□□□ -1.81
Col6a4A2AX52 Gm28331-201ENSMUST00000191102 621 ntTSL 5 BASIC3.74□□□□□ -1.81
Col6a4A2AX52 Gm29459-201ENSMUST00000191359 518 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
Col6a4A2AX52 Gm43814-201ENSMUST00000197851 413 ntBASIC3.74□□□□□ -1.81
Col6a4A2AX52 2510017J16Rik-201ENSMUST00000198718 1263 ntBASIC3.74□□□□□ -1.81
Col6a4A2AX52 Gm43559-201ENSMUST00000198755 466 ntBASIC3.74□□□□□ -1.81
Col6a4A2AX52 Gm43710-201ENSMUST00000199583 452 ntBASIC3.74□□□□□ -1.81
Col6a4A2AX52 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC3.74□□□□□ -1.81
Col6a4A2AX52 Gm45523-201ENSMUST00000210712 799 ntBASIC3.74□□□□□ -1.81
Col6a4A2AX52 AC127581.1-201ENSMUST00000214084 771 ntTSL 5 BASIC3.74□□□□□ -1.81
Col6a4A2AX52 Primpol-201ENSMUST00000040468 3772 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
Col6a4A2AX52 Olfr1262-202ENSMUST00000111508 6068 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
Col6a4A2AX52 Gda-202ENSMUST00000121725 2450 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
Col6a4A2AX52 Gm42552-201ENSMUST00000196754 4497 ntBASIC3.74□□□□□ -1.81
Col6a4A2AX52 Zfy2-202ENSMUST00000187148 2846 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
Col6a4A2AX52 Kcnj1-201ENSMUST00000047334 2987 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
Col6a4A2AX52 Zfp738-203ENSMUST00000137496 13215 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
Col6a4A2AX52 Mrgprc2-ps-201ENSMUST00000188039 1516 ntBASIC3.74□□□□□ -1.81
Col6a4A2AX52 Amd2-201ENSMUST00000080898 3218 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
Col6a4A2AX52 Gm8666-201ENSMUST00000117517 292 ntBASIC3.73□□□□□ -1.81
Col6a4A2AX52 Gm14103-201ENSMUST00000119075 366 ntBASIC3.73□□□□□ -1.81
Col6a4A2AX52 Gm8200-201ENSMUST00000122390 222 ntBASIC3.73□□□□□ -1.81
Col6a4A2AX52 4930525G20Rik-201ENSMUST00000181912 2987 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
Col6a4A2AX52 Gm43001-202ENSMUST00000199076 192 ntTSL 3 BASIC3.73□□□□□ -1.81
Col6a4A2AX52 Gm33758-201ENSMUST00000199230 407 ntTSL 3 BASIC3.73□□□□□ -1.81
Col6a4A2AX52 Gm44583-201ENSMUST00000207478 281 ntBASIC3.73□□□□□ -1.81
Col6a4A2AX52 AC141425.1-201ENSMUST00000224989 265 ntBASIC3.73□□□□□ -1.81
Col6a4A2AX52 Vmn1r31-205ENSMUST00000228586 2115 ntAPPRIS P2 BASIC3.73□□□□□ -1.81
Col6a4A2AX52 4933400A11Rik-201ENSMUST00000068874 1230 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Col6a4A2AX52 Olfr713-201ENSMUST00000098139 975 ntBASIC3.73□□□□□ -1.81
Col6a4A2AX52 Gm20276-201ENSMUST00000216122 2648 ntBASIC3.73□□□□□ -1.81
Col6a4A2AX52 Gm3629-201ENSMUST00000171706 1756 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Col6a4A2AX52 Olfr1209-202ENSMUST00000213136 5611 ntAPPRIS P1 TSL 3 BASIC3.73□□□□□ -1.81
Col6a4A2AX52 Slc22a22-201ENSMUST00000022995 2015 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Col6a4A2AX52 Gm45885-202ENSMUST00000211520 1383 ntBASIC3.73□□□□□ -1.81
Col6a4A2AX52 Gm43527-201ENSMUST00000198749 3178 ntBASIC3.73□□□□□ -1.81
Col6a4A2AX52 Gm29674-202ENSMUST00000219664 4083 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
Col6a4A2AX52 Gm19136-201ENSMUST00000190706 2067 ntBASIC3.73□□□□□ -1.81
Col6a4A2AX52 Ptprz1-201ENSMUST00000090568 8068 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
Col6a4A2AX52 Olfr1196-201ENSMUST00000104892 945 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
Col6a4A2AX52 Gm11406-201ENSMUST00000117418 484 ntBASIC3.73□□□□□ -1.81
Col6a4A2AX52 Gm26036-201ENSMUST00000158149 144 ntBASIC3.73□□□□□ -1.81
Col6a4A2AX52 Gm27037-201ENSMUST00000182270 960 ntBASIC3.73□□□□□ -1.81
Col6a4A2AX52 Gm37370-201ENSMUST00000191996 1410 ntBASIC3.73□□□□□ -1.81
Col6a4A2AX52 Gm43735-201ENSMUST00000198245 809 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 85 ms