Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Gm26996-201ENSMUST00000204418 1359 ntBASIC4.95□□□□□ -1.62
Scn3aA2ASI5 Gm20449-201ENSMUST00000094532 3847 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
Scn3aA2ASI5 Arhgef6-201ENSMUST00000033468 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Scn3aA2ASI5 Gm19757-201ENSMUST00000205113 2946 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Scn3aA2ASI5 Btbd35f21-201ENSMUST00000105017 1943 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Scn3aA2ASI5 Btbd35f16-201ENSMUST00000185755 1949 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Scn3aA2ASI5 Ktn1-226ENSMUST00000191511 3962 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
Scn3aA2ASI5 Trav15-1-dv6-1-201ENSMUST00000103653 349 ntAPPRIS ALT2 BASIC4.95□□□□□ -1.62
Scn3aA2ASI5 Synj2bp-202ENSMUST00000114201 1121 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Scn3aA2ASI5 Cav1-203ENSMUST00000115454 613 ntTSL 2 BASIC4.95□□□□□ -1.62
Scn3aA2ASI5 Gm22958-201ENSMUST00000122512 184 ntBASIC4.95□□□□□ -1.62
Scn3aA2ASI5 2310016D23Rik-201ENSMUST00000130082 388 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Scn3aA2ASI5 AI838599-201ENSMUST00000133960 2953 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Scn3aA2ASI5 Gm8790-201ENSMUST00000194108 322 ntBASIC4.95□□□□□ -1.62
Scn3aA2ASI5 Gm37505-201ENSMUST00000195670 461 ntTSL 5 BASIC4.95□□□□□ -1.62
Scn3aA2ASI5 4930425K10Rik-201ENSMUST00000201190 745 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Scn3aA2ASI5 AC159297.1-201ENSMUST00000218689 290 ntBASIC4.95□□□□□ -1.62
Scn3aA2ASI5 n-R5s85-201ENSMUST00000083453 113 ntBASIC4.95□□□□□ -1.62
Scn3aA2ASI5 Phf11d-201ENSMUST00000095157 2666 ntAPPRIS P2 TSL 1 (best) BASIC4.95□□□□□ -1.62
Scn3aA2ASI5 Cyp39a1-201ENSMUST00000170988 3053 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Scn3aA2ASI5 Zan-204ENSMUST00000164178 16451 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Scn3aA2ASI5 Dync2h1-204ENSMUST00000140466 14264 ntAPPRIS P2 TSL 5 BASIC4.94□□□□□ -1.62
Scn3aA2ASI5 Gm35842-201ENSMUST00000207859 4464 ntTSL 5 BASIC4.94□□□□□ -1.62
Scn3aA2ASI5 Olfr1328-202ENSMUST00000215312 5038 ntAPPRIS ALT1 TSL 5 BASIC4.94□□□□□ -1.62
Scn3aA2ASI5 AC159193.1-201ENSMUST00000222872 2517 ntBASIC4.94□□□□□ -1.62
Scn3aA2ASI5 Btbd35f17-201ENSMUST00000105014 1960 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Scn3aA2ASI5 Btbd35f28-201ENSMUST00000105015 1960 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Scn3aA2ASI5 Btbd35f18-201ENSMUST00000105019 1960 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Scn3aA2ASI5 Btbd35f11-201ENSMUST00000105020 1960 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Scn3aA2ASI5 Gm7073-203ENSMUST00000190178 1419 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Scn3aA2ASI5 Traj17-201ENSMUST00000103724 63 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Scn3aA2ASI5 Gm14401-201ENSMUST00000108968 247 ntTSL 5 BASIC4.94□□□□□ -1.62
Scn3aA2ASI5 Gm12994-201ENSMUST00000119601 447 ntBASIC4.94□□□□□ -1.62
Scn3aA2ASI5 Gm11510-201ENSMUST00000120278 347 ntBASIC4.94□□□□□ -1.62
Scn3aA2ASI5 4930451E10Rik-201ENSMUST00000130840 409 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Scn3aA2ASI5 Gm25713-201ENSMUST00000158625 109 ntBASIC4.94□□□□□ -1.62
Scn3aA2ASI5 Gm3434-202ENSMUST00000184421 521 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Scn3aA2ASI5 AC164437.2-201ENSMUST00000228915 797 ntBASIC4.94□□□□□ -1.62
Scn3aA2ASI5 Olfr1507-201ENSMUST00000073571 1112 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Scn3aA2ASI5 Gm25818-201ENSMUST00000083282 164 ntBASIC4.94□□□□□ -1.62
Scn3aA2ASI5 Gm4724-201ENSMUST00000109045 1659 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
Scn3aA2ASI5 4732496C06Rik-201ENSMUST00000206533 2500 ntBASIC4.94□□□□□ -1.62
Scn3aA2ASI5 Gm38190-201ENSMUST00000192350 4755 ntBASIC4.94□□□□□ -1.62
Scn3aA2ASI5 Vmn1r171-208ENSMUST00000227866 2566 ntAPPRIS ALT2 BASIC4.94□□□□□ -1.62
Scn3aA2ASI5 1700017N19Rik-204ENSMUST00000188736 1709 ntTSL 5 BASIC4.93□□□□□ -1.62
Scn3aA2ASI5 Smpx-203ENSMUST00000112521 898 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Scn3aA2ASI5 Gm37134-201ENSMUST00000195810 628 ntTSL 3 BASIC4.93□□□□□ -1.62
Scn3aA2ASI5 Gm43441-201ENSMUST00000201458 205 ntBASIC4.93□□□□□ -1.62
Scn3aA2ASI5 Gm31897-201ENSMUST00000205924 340 ntTSL 5 BASIC4.93□□□□□ -1.62
Scn3aA2ASI5 Gm30893-201ENSMUST00000220479 903 ntTSL 5 BASIC4.93□□□□□ -1.62
Scn3aA2ASI5 AC114573.1-201ENSMUST00000224120 1210 ntBASIC4.93□□□□□ -1.62
Scn3aA2ASI5 Il6-201ENSMUST00000026845 1141 ntAPPRIS P2 TSL 1 (best) BASIC4.93□□□□□ -1.62
Scn3aA2ASI5 Mup3-201ENSMUST00000084531 938 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Scn3aA2ASI5 Olfr1162-201ENSMUST00000099837 945 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Scn3aA2ASI5 Fat1-201ENSMUST00000098796 14627 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Scn3aA2ASI5 Pgap1-201ENSMUST00000097739 10583 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Scn3aA2ASI5 AC139754.3-201ENSMUST00000220444 1627 ntBASIC4.93□□□□□ -1.62
Scn3aA2ASI5 Nop58-215ENSMUST00000191142 9507 ntAPPRIS P2 TSL 1 (best) BASIC4.93□□□□□ -1.62
Scn3aA2ASI5 Vmn1r217-202ENSMUST00000227110 9888 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Scn3aA2ASI5 1700092C17Rik-201ENSMUST00000135792 424 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Scn3aA2ASI5 Gm16545-201ENSMUST00000161968 463 ntBASIC4.93□□□□□ -1.62
Scn3aA2ASI5 1700016G22Rik-202ENSMUST00000186843 594 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Scn3aA2ASI5 Gm36998-201ENSMUST00000193205 704 ntBASIC4.93□□□□□ -1.62
Scn3aA2ASI5 Gm37601-201ENSMUST00000194922 394 ntBASIC4.93□□□□□ -1.62
Scn3aA2ASI5 Gm37095-201ENSMUST00000195421 205 ntBASIC4.93□□□□□ -1.62
Scn3aA2ASI5 Cycs-ps2-201ENSMUST00000197114 292 ntBASIC4.93□□□□□ -1.62
Scn3aA2ASI5 Klhl13-201ENSMUST00000035973 2996 ntTSL 5 BASIC4.93□□□□□ -1.62
Scn3aA2ASI5 Olfr934-203ENSMUST00000216823 2440 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Scn3aA2ASI5 Gm36229-201ENSMUST00000218737 1855 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Scn3aA2ASI5 Olfr646-202ENSMUST00000214099 3778 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Scn3aA2ASI5 Zfp667-202ENSMUST00000108562 3498 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
Scn3aA2ASI5 Dgkk-201ENSMUST00000067410 7155 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Scn3aA2ASI5 Gpm6a-201ENSMUST00000033915 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Scn3aA2ASI5 Gabrg2-201ENSMUST00000070725 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Scn3aA2ASI5 AC169985.1-201ENSMUST00000223648 2439 ntBASIC4.92□□□□□ -1.62
Scn3aA2ASI5 Vmn1r185-209ENSMUST00000228133 5749 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Scn3aA2ASI5 Il5ra-202ENSMUST00000204659 3575 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Scn3aA2ASI5 Olfr128-202ENSMUST00000216440 3644 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Scn3aA2ASI5 Gm15226-201ENSMUST00000156526 2971 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Scn3aA2ASI5 Gm28168-201ENSMUST00000191265 2630 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Scn3aA2ASI5 Wac-217ENSMUST00000172018 1965 ntTSL 5 BASIC4.92□□□□□ -1.62
Scn3aA2ASI5 Gm43871-201ENSMUST00000204931 1955 ntBASIC4.92□□□□□ -1.62
Scn3aA2ASI5 Zfp184-205ENSMUST00000176511 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Scn3aA2ASI5 Mir105-201ENSMUST00000104655 80 ntBASIC4.92□□□□□ -1.62
Scn3aA2ASI5 Gm15426-201ENSMUST00000117823 556 ntBASIC4.92□□□□□ -1.62
Scn3aA2ASI5 2610024D14Rik-201ENSMUST00000121233 294 ntBASIC4.92□□□□□ -1.62
Scn3aA2ASI5 Gm14003-201ENSMUST00000130919 313 ntTSL 3 BASIC4.92□□□□□ -1.62
Scn3aA2ASI5 Gm12249-201ENSMUST00000132323 719 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Scn3aA2ASI5 Gm14095-201ENSMUST00000134264 516 ntTSL 3 BASIC4.92□□□□□ -1.62
Scn3aA2ASI5 Gm15346-201ENSMUST00000143638 475 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Scn3aA2ASI5 Gm45246-201ENSMUST00000210820 367 ntBASIC4.92□□□□□ -1.62
Scn3aA2ASI5 Gm8942-201ENSMUST00000217892 400 ntBASIC4.92□□□□□ -1.62
Scn3aA2ASI5 Olfr202-201ENSMUST00000049859 924 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Scn3aA2ASI5 Olfr986-201ENSMUST00000062229 1016 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Scn3aA2ASI5 Sprr2e-201ENSMUST00000068399 647 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Scn3aA2ASI5 Gm23510-201ENSMUST00000083083 163 ntBASIC4.92□□□□□ -1.62
Scn3aA2ASI5 Gm10491-201ENSMUST00000085330 117 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Scn3aA2ASI5 Olfr1107-201ENSMUST00000099865 1109 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Scn3aA2ASI5 Zfp426-208ENSMUST00000166005 1653 ntAPPRIS P3 TSL 5 BASIC4.92□□□□□ -1.62
Scn3aA2ASI5 Gm16185-201ENSMUST00000125071 3207 ntTSL 5 BASIC4.92□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 70.2 ms