Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 AC138284.2-201ENSMUST00000213982 567 ntBASIC4.52□□□□□ -1.69
Trim3Q9R1R2 Supt4b-201ENSMUST00000214434 351 ntBASIC4.52□□□□□ -1.69
Trim3Q9R1R2 AC138290.1-201ENSMUST00000219242 820 ntTSL 5 BASIC4.52□□□□□ -1.69
Trim3Q9R1R2 Gm35041-201ENSMUST00000219581 602 ntTSL 3 BASIC4.52□□□□□ -1.69
Trim3Q9R1R2 Tmem209-211ENSMUST00000222934 1212 ntTSL 5 BASIC4.52□□□□□ -1.69
Trim3Q9R1R2 AC154527.3-201ENSMUST00000225519 989 ntBASIC4.52□□□□□ -1.69
Trim3Q9R1R2 AC106830.1-201ENSMUST00000228032 1003 ntBASIC4.52□□□□□ -1.69
Trim3Q9R1R2 4930583I09Rik-201ENSMUST00000024896 630 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Trim3Q9R1R2 Pate4-201ENSMUST00000034610 1072 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Trim3Q9R1R2 Gm5215-201ENSMUST00000054380 405 ntBASIC4.52□□□□□ -1.69
Trim3Q9R1R2 Gm7665-201ENSMUST00000076710 297 ntBASIC4.52□□□□□ -1.69
Trim3Q9R1R2 Olfr477-201ENSMUST00000091605 933 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Trim3Q9R1R2 Gm5169-201ENSMUST00000096469 768 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Trim3Q9R1R2 Olfr59-201ENSMUST00000143976 3088 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
Trim3Q9R1R2 Gpr141-201ENSMUST00000065335 3433 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Trim3Q9R1R2 Olfr126-202ENSMUST00000213844 1958 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Trim3Q9R1R2 Gm13582-201ENSMUST00000146034 2655 ntTSL 2 BASIC4.52□□□□□ -1.69
Trim3Q9R1R2 Vmn1r32-202ENSMUST00000227014 2661 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Trim3Q9R1R2 Mdga2-211ENSMUST00000222623 1449 ntTSL 5 BASIC4.52□□□□□ -1.69
Trim3Q9R1R2 Gm26522-201ENSMUST00000181565 1555 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Trim3Q9R1R2 Lrrc4c-201ENSMUST00000059049 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Trim3Q9R1R2 Skint11-204ENSMUST00000164297 1393 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Trim3Q9R1R2 Gm31747-201ENSMUST00000204638 3086 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Trim3Q9R1R2 BC051142-201ENSMUST00000078615 1899 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
Trim3Q9R1R2 Egfros-201ENSMUST00000150329 4063 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Trim3Q9R1R2 Olfr992-202ENSMUST00000213749 2150 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Trim3Q9R1R2 Gm10727-201ENSMUST00000197107 1602 ntBASIC4.51□□□□□ -1.69
Trim3Q9R1R2 Chrnb3-203ENSMUST00000211104 3241 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Trim3Q9R1R2 Gm5117-201ENSMUST00000178878 2553 ntBASIC4.51□□□□□ -1.69
Trim3Q9R1R2 Gm14819-201ENSMUST00000101645 928 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Trim3Q9R1R2 Elavl2-202ENSMUST00000102799 3840 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Trim3Q9R1R2 Gm12379-201ENSMUST00000119607 391 ntBASIC4.51□□□□□ -1.69
Trim3Q9R1R2 4930547E08Rik-201ENSMUST00000143559 541 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Trim3Q9R1R2 Gm25714-201ENSMUST00000158626 296 ntBASIC4.51□□□□□ -1.69
Trim3Q9R1R2 Gm24664-201ENSMUST00000158939 100 ntBASIC4.51□□□□□ -1.69
Trim3Q9R1R2 5430401F13Rik-202ENSMUST00000161385 608 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Trim3Q9R1R2 Gm17103-201ENSMUST00000168897 549 ntTSL 3 BASIC4.51□□□□□ -1.69
Trim3Q9R1R2 Vmn1r155-201ENSMUST00000177632 924 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Trim3Q9R1R2 Vmn1r137-201ENSMUST00000177884 924 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Trim3Q9R1R2 Vmn1r130-201ENSMUST00000177936 924 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Trim3Q9R1R2 Vmn1r107-201ENSMUST00000179079 924 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Trim3Q9R1R2 Vmn1r165-201ENSMUST00000179594 924 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Trim3Q9R1R2 4831440E17Rik-201ENSMUST00000181942 1028 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Trim3Q9R1R2 Gm26983-201ENSMUST00000182051 388 ntBASIC4.51□□□□□ -1.69
Trim3Q9R1R2 Gm27039-201ENSMUST00000182438 962 ntBASIC4.51□□□□□ -1.69
Trim3Q9R1R2 Obox8-201ENSMUST00000184356 1167 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Trim3Q9R1R2 1600010M07Rik-201ENSMUST00000185931 1204 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Trim3Q9R1R2 Gm37710-201ENSMUST00000193501 1274 ntBASIC4.51□□□□□ -1.69
Trim3Q9R1R2 Gm20056-201ENSMUST00000194813 519 ntBASIC4.51□□□□□ -1.69
Trim3Q9R1R2 4930599N24Rik-201ENSMUST00000198822 1003 ntBASIC4.51□□□□□ -1.69
Trim3Q9R1R2 Olfr1309-201ENSMUST00000207885 964 ntBASIC4.51□□□□□ -1.69
Trim3Q9R1R2 Gm19201-201ENSMUST00000210127 778 ntBASIC4.51□□□□□ -1.69
Trim3Q9R1R2 AC160635.2-201ENSMUST00000216368 734 ntTSL 5 BASIC4.51□□□□□ -1.69
Trim3Q9R1R2 AC164567.4-201ENSMUST00000219708 483 ntBASIC4.51□□□□□ -1.69
Trim3Q9R1R2 AC155236.1-201ENSMUST00000220591 923 ntTSL 5 BASIC4.51□□□□□ -1.69
Trim3Q9R1R2 AC159622.1-201ENSMUST00000221004 554 ntBASIC4.51□□□□□ -1.69
Trim3Q9R1R2 AC211878.2-201ENSMUST00000222486 488 ntBASIC4.51□□□□□ -1.69
Trim3Q9R1R2 Smim15-204ENSMUST00000224390 645 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Trim3Q9R1R2 Cst9-201ENSMUST00000028935 687 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Trim3Q9R1R2 Gm6195-201ENSMUST00000063059 357 ntBASIC4.51□□□□□ -1.69
Trim3Q9R1R2 Olfr955-201ENSMUST00000073946 945 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Trim3Q9R1R2 V1ra8-201ENSMUST00000078371 890 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Trim3Q9R1R2 Olfr1351-201ENSMUST00000080730 960 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Trim3Q9R1R2 Gm23626-201ENSMUST00000082458 133 ntBASIC4.51□□□□□ -1.69
Trim3Q9R1R2 Mir338-201ENSMUST00000083666 98 ntBASIC4.51□□□□□ -1.69
Trim3Q9R1R2 Zfp458-204ENSMUST00000225772 3485 ntAPPRIS ALT2 BASIC4.51□□□□□ -1.69
Trim3Q9R1R2 Olfr1406-203ENSMUST00000215878 3149 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Trim3Q9R1R2 A230057D06Rik-203ENSMUST00000208953 3357 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Trim3Q9R1R2 Rgs21-202ENSMUST00000184189 1674 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Trim3Q9R1R2 Gm44109-201ENSMUST00000204514 1954 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Trim3Q9R1R2 Gm42598-201ENSMUST00000200110 2437 ntBASIC4.51□□□□□ -1.69
Trim3Q9R1R2 Olfr1387-202ENSMUST00000214541 4840 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Trim3Q9R1R2 Gm26814-201ENSMUST00000181178 4149 ntBASIC4.5□□□□□ -1.69
Trim3Q9R1R2 AC163296.2-201ENSMUST00000220177 1315 ntBASIC4.5□□□□□ -1.69
Trim3Q9R1R2 Gm20139-202ENSMUST00000216041 3888 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Trim3Q9R1R2 Gm45378-201ENSMUST00000211063 2711 ntBASIC4.5□□□□□ -1.69
Trim3Q9R1R2 Pde1a-204ENSMUST00000102653 2439 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Trim3Q9R1R2 Scgb2b3-201ENSMUST00000108090 339 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Trim3Q9R1R2 Cask-202ENSMUST00000115435 726 ntTSL 3 BASIC4.5□□□□□ -1.69
Trim3Q9R1R2 Gm14575-201ENSMUST00000117210 560 ntBASIC4.5□□□□□ -1.69
Trim3Q9R1R2 Gm11822-201ENSMUST00000119177 415 ntBASIC4.5□□□□□ -1.69
Trim3Q9R1R2 Gm4910-201ENSMUST00000119605 366 ntBASIC4.5□□□□□ -1.69
Trim3Q9R1R2 Olfr1035-ps1-201ENSMUST00000120109 966 ntBASIC4.5□□□□□ -1.69
Trim3Q9R1R2 Gm13902-201ENSMUST00000120168 605 ntBASIC4.5□□□□□ -1.69
Trim3Q9R1R2 Gm16365-204ENSMUST00000143877 779 ntTSL 2 BASIC4.5□□□□□ -1.69
Trim3Q9R1R2 Gm22870-201ENSMUST00000157501 112 ntBASIC4.5□□□□□ -1.69
Trim3Q9R1R2 Gm25603-201ENSMUST00000158361 105 ntBASIC4.5□□□□□ -1.69
Trim3Q9R1R2 Gm22158-201ENSMUST00000158411 126 ntBASIC4.5□□□□□ -1.69
Trim3Q9R1R2 Gm3531-201ENSMUST00000162698 489 ntBASIC4.5□□□□□ -1.69
Trim3Q9R1R2 Gm17060-201ENSMUST00000172394 824 ntBASIC4.5□□□□□ -1.69
Trim3Q9R1R2 Gm26763-201ENSMUST00000180968 1093 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Trim3Q9R1R2 Gm7976-201ENSMUST00000181507 1242 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Trim3Q9R1R2 4933440J02Rik-201ENSMUST00000181547 1144 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Trim3Q9R1R2 Gm28721-201ENSMUST00000187649 918 ntTSL 3 BASIC4.5□□□□□ -1.69
Trim3Q9R1R2 Gm5511-201ENSMUST00000189380 802 ntBASIC4.5□□□□□ -1.69
Trim3Q9R1R2 Gm4035-201ENSMUST00000189445 399 ntTSL 3 BASIC4.5□□□□□ -1.69
Trim3Q9R1R2 Gm18985-201ENSMUST00000196472 1079 ntBASIC4.5□□□□□ -1.69
Trim3Q9R1R2 Gm40263-201ENSMUST00000197468 580 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Trim3Q9R1R2 Gm33093-201ENSMUST00000197751 790 ntTSL 5 BASIC4.5□□□□□ -1.69
Trim3Q9R1R2 Gm43919-201ENSMUST00000204303 364 ntBASIC4.5□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 105.8 ms