Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm12259-201ENSMUST00000138391 328 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Lima1Q9ERG0 4930440I19Rik-202ENSMUST00000145972 676 ntTSL 2 BASIC4.48□□□□□ -1.69
Lima1Q9ERG0 Gm23546-201ENSMUST00000158211 137 ntBASIC4.48□□□□□ -1.69
Lima1Q9ERG0 Gm23046-201ENSMUST00000158369 284 ntBASIC4.48□□□□□ -1.69
Lima1Q9ERG0 Gm17421-201ENSMUST00000167845 674 ntBASIC4.48□□□□□ -1.69
Lima1Q9ERG0 Gm8214-201ENSMUST00000172123 351 ntBASIC4.48□□□□□ -1.69
Lima1Q9ERG0 Vmn1r-ps55-201ENSMUST00000174634 392 ntBASIC4.48□□□□□ -1.69
Lima1Q9ERG0 Vmn2r-ps6-201ENSMUST00000176317 1101 ntBASIC4.48□□□□□ -1.69
Lima1Q9ERG0 Cldn34b4-202ENSMUST00000178974 881 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Lima1Q9ERG0 Gm27457-201ENSMUST00000184771 156 ntBASIC4.48□□□□□ -1.69
Lima1Q9ERG0 1700128A07Rik-201ENSMUST00000186311 860 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Lima1Q9ERG0 Gm2053-201ENSMUST00000195671 631 ntBASIC4.48□□□□□ -1.69
Lima1Q9ERG0 Mir6994-201ENSMUST00000198985 73 ntBASIC4.48□□□□□ -1.69
Lima1Q9ERG0 3110043J17Rik-201ENSMUST00000219153 760 ntBASIC4.48□□□□□ -1.69
Lima1Q9ERG0 AC127279.1-201ENSMUST00000220140 637 ntBASIC4.48□□□□□ -1.69
Lima1Q9ERG0 Gm10037-202ENSMUST00000221266 549 ntAPPRIS P5 TSL 2 BASIC4.48□□□□□ -1.69
Lima1Q9ERG0 AC125399.1-201ENSMUST00000224236 595 ntBASIC4.48□□□□□ -1.69
Lima1Q9ERG0 Fam183b-201ENSMUST00000060581 493 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Lima1Q9ERG0 Gm23300-201ENSMUST00000082712 125 ntBASIC4.48□□□□□ -1.69
Lima1Q9ERG0 Olfr588-ps1-201ENSMUST00000118682 4607 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Lima1Q9ERG0 Arpp19-203ENSMUST00000166549 1747 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Lima1Q9ERG0 Vmn1r209-202ENSMUST00000227038 6461 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Lima1Q9ERG0 Olfr672-202ENSMUST00000213942 1490 ntAPPRIS P1 TSL 3 BASIC4.48□□□□□ -1.69
Lima1Q9ERG0 Slfn10-ps-201ENSMUST00000100716 3621 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Lima1Q9ERG0 2700016F22Rik-201ENSMUST00000181556 3605 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Lima1Q9ERG0 Hnrnpr-207ENSMUST00000148843 21452 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Lima1Q9ERG0 Cnot6l-210ENSMUST00000155901 8564 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
Lima1Q9ERG0 Gm42680-201ENSMUST00000196238 2500 ntBASIC4.47□□□□□ -1.69
Lima1Q9ERG0 Olfr556-203ENSMUST00000217526 3741 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Lima1Q9ERG0 Cdh19-201ENSMUST00000094626 3914 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Lima1Q9ERG0 Dync2h1-204ENSMUST00000140466 14264 ntAPPRIS P2 TSL 5 BASIC4.47□□□□□ -1.69
Lima1Q9ERG0 Dnah6-203ENSMUST00000114040 12513 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
Lima1Q9ERG0 Gm37195-201ENSMUST00000192006 3018 ntBASIC4.47□□□□□ -1.69
Lima1Q9ERG0 Gm37393-201ENSMUST00000195118 3870 ntBASIC4.47□□□□□ -1.69
Lima1Q9ERG0 A730046J19Rik-201ENSMUST00000135687 4707 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Lima1Q9ERG0 Zfp322a-201ENSMUST00000050101 4844 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Lima1Q9ERG0 Gprc6a-201ENSMUST00000020062 2856 ntAPPRIS P2 TSL 1 (best) BASIC4.47□□□□□ -1.69
Lima1Q9ERG0 Igkv1-132-201ENSMUST00000103305 362 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Lima1Q9ERG0 Lipe-203ENSMUST00000105177 1251 ntBASIC4.47□□□□□ -1.69
Lima1Q9ERG0 Gm14444-201ENSMUST00000109069 919 ntTSL 2 BASIC4.47□□□□□ -1.69
Lima1Q9ERG0 Gm10552-201ENSMUST00000113396 372 ntBASIC4.47□□□□□ -1.69
Lima1Q9ERG0 Gm11255-201ENSMUST00000120448 1180 ntBASIC4.47□□□□□ -1.69
Lima1Q9ERG0 2610024D14Rik-201ENSMUST00000121233 294 ntBASIC4.47□□□□□ -1.69
Lima1Q9ERG0 Gm11759-201ENSMUST00000121742 464 ntBASIC4.47□□□□□ -1.69
Lima1Q9ERG0 Gm15212-201ENSMUST00000122403 466 ntBASIC4.47□□□□□ -1.69
Lima1Q9ERG0 Ccdc34os-201ENSMUST00000123633 979 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Lima1Q9ERG0 4933416I08Rik-201ENSMUST00000125315 703 ntBASIC4.47□□□□□ -1.69
Lima1Q9ERG0 Gm15288-201ENSMUST00000126640 653 ntTSL 3 BASIC4.47□□□□□ -1.69
Lima1Q9ERG0 Gm2182-201ENSMUST00000145243 663 ntBASIC4.47□□□□□ -1.69
Lima1Q9ERG0 Gm25383-201ENSMUST00000157810 144 ntBASIC4.47□□□□□ -1.69
Lima1Q9ERG0 Gm3531-201ENSMUST00000162698 489 ntBASIC4.47□□□□□ -1.69
Lima1Q9ERG0 Mir5103-201ENSMUST00000175111 79 ntBASIC4.47□□□□□ -1.69
Lima1Q9ERG0 Gm6546-201ENSMUST00000192096 766 ntBASIC4.47□□□□□ -1.69
Lima1Q9ERG0 Gm37815-201ENSMUST00000195665 411 ntTSL 5 BASIC4.47□□□□□ -1.69
Lima1Q9ERG0 Gm43724-201ENSMUST00000197516 226 ntBASIC4.47□□□□□ -1.69
Lima1Q9ERG0 Gm43580-201ENSMUST00000202892 284 ntBASIC4.47□□□□□ -1.69
Lima1Q9ERG0 Fxyd1-210ENSMUST00000206012 501 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Lima1Q9ERG0 Gm44816-201ENSMUST00000206666 477 ntBASIC4.47□□□□□ -1.69
Lima1Q9ERG0 Gm28710-202ENSMUST00000211738 2987 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Lima1Q9ERG0 AC154371.1-201ENSMUST00000226600 412 ntBASIC4.47□□□□□ -1.69
Lima1Q9ERG0 Olfr135-201ENSMUST00000076245 1079 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Lima1Q9ERG0 Prl3d2-201ENSMUST00000080755 853 ntAPPRIS P2 TSL 5 BASIC4.47□□□□□ -1.69
Lima1Q9ERG0 Gm8724-201ENSMUST00000081668 483 ntBASIC4.47□□□□□ -1.69
Lima1Q9ERG0 Gm24207-201ENSMUST00000082781 108 ntBASIC4.47□□□□□ -1.69
Lima1Q9ERG0 C2cd6-201ENSMUST00000097080 2131 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
Lima1Q9ERG0 Olfr1314-201ENSMUST00000099598 939 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Lima1Q9ERG0 3110080E11Rik-201ENSMUST00000210736 3477 ntBASIC4.47□□□□□ -1.69
Lima1Q9ERG0 Olfr1312-203ENSMUST00000213961 5345 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Lima1Q9ERG0 Olfr351-202ENSMUST00000213676 3426 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Lima1Q9ERG0 Gm35191-201ENSMUST00000200925 2475 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Lima1Q9ERG0 Rabgap1-202ENSMUST00000066055 4247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
Lima1Q9ERG0 Cd28-201ENSMUST00000027165 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Lima1Q9ERG0 Cast-208ENSMUST00000223033 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
Lima1Q9ERG0 Pign-205ENSMUST00000186485 6759 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Lima1Q9ERG0 Olfr824-202ENSMUST00000214192 3862 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.69
Lima1Q9ERG0 AC190403.1-201ENSMUST00000224515 1325 ntBASIC4.46□□□□□ -1.69
Lima1Q9ERG0 Tmem167-201ENSMUST00000012566 1541 ntTSL 5 BASIC4.46□□□□□ -1.69
Lima1Q9ERG0 Vmn2r-ps123-201ENSMUST00000176763 2410 ntBASIC4.46□□□□□ -1.69
Lima1Q9ERG0 Gm42946-201ENSMUST00000196108 2570 ntBASIC4.46□□□□□ -1.7
Lima1Q9ERG0 Ttc33-202ENSMUST00000081640 1583 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Lima1Q9ERG0 4933439N06Rik-201ENSMUST00000203062 1365 ntBASIC4.46□□□□□ -1.7
Lima1Q9ERG0 Prl2b1-202ENSMUST00000102954 870 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
Lima1Q9ERG0 Gm13755-201ENSMUST00000118509 305 ntBASIC4.46□□□□□ -1.7
Lima1Q9ERG0 Gm15361-201ENSMUST00000119320 444 ntBASIC4.46□□□□□ -1.7
Lima1Q9ERG0 Gm14603-201ENSMUST00000121275 448 ntBASIC4.46□□□□□ -1.7
Lima1Q9ERG0 Gm25106-201ENSMUST00000122672 134 ntBASIC4.46□□□□□ -1.7
Lima1Q9ERG0 Gm27039-201ENSMUST00000182438 962 ntBASIC4.46□□□□□ -1.7
Lima1Q9ERG0 Gm27202-201ENSMUST00000183838 512 ntTSL 5 BASIC4.46□□□□□ -1.7
Lima1Q9ERG0 Skint2-204ENSMUST00000186969 1258 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
Lima1Q9ERG0 Gm28830-201ENSMUST00000188192 213 ntBASIC4.46□□□□□ -1.7
Lima1Q9ERG0 Gm43507-201ENSMUST00000196411 675 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Lima1Q9ERG0 Gm17775-201ENSMUST00000198542 258 ntBASIC4.46□□□□□ -1.7
Lima1Q9ERG0 Gm44515-201ENSMUST00000209045 379 ntTSL 5 BASIC4.46□□□□□ -1.7
Lima1Q9ERG0 Rps26-ps1-202ENSMUST00000212102 351 ntBASIC4.46□□□□□ -1.7
Lima1Q9ERG0 AC154313.1-201ENSMUST00000217755 3841 ntBASIC4.46□□□□□ -1.7
Lima1Q9ERG0 Gm46430-203ENSMUST00000221389 1049 ntTSL 5 BASIC4.46□□□□□ -1.7
Lima1Q9ERG0 AC125543.1-201ENSMUST00000222778 101 ntBASIC4.46□□□□□ -1.7
Lima1Q9ERG0 AC154576.1-201ENSMUST00000225864 563 ntBASIC4.46□□□□□ -1.7
Lima1Q9ERG0 AC112142.1-206ENSMUST00000228136 982 ntBASIC4.46□□□□□ -1.7
Lima1Q9ERG0 Olfr655-201ENSMUST00000057385 927 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms