Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm44171-201ENSMUST00000203701 2109 ntBASIC4.41□□□□□ -1.7
Cdc40Q9DC48 Gm44603-201ENSMUST00000206820 367 ntBASIC4.41□□□□□ -1.7
Cdc40Q9DC48 AC153816.1-201ENSMUST00000217870 764 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Cdc40Q9DC48 1700025K04Rik-201ENSMUST00000218075 1174 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Cdc40Q9DC48 Gm36377-201ENSMUST00000220833 757 ntTSL 2 BASIC4.41□□□□□ -1.7
Cdc40Q9DC48 Gm17915-201ENSMUST00000222077 548 ntBASIC4.41□□□□□ -1.7
Cdc40Q9DC48 3830408C21Rik-203ENSMUST00000224293 822 ntBASIC4.41□□□□□ -1.7
Cdc40Q9DC48 Gm24166-201ENSMUST00000082724 135 ntBASIC4.41□□□□□ -1.7
Cdc40Q9DC48 Gm18493-201ENSMUST00000192084 1612 ntBASIC4.41□□□□□ -1.7
Cdc40Q9DC48 Olfr123-202ENSMUST00000214770 2883 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Cdc40Q9DC48 Olfr617-203ENSMUST00000216516 3083 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Cdc40Q9DC48 Gm44587-201ENSMUST00000207399 1685 ntBASIC4.41□□□□□ -1.7
Cdc40Q9DC48 Ugt2b1-201ENSMUST00000031183 2573 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Cdc40Q9DC48 Ifit2-201ENSMUST00000102826 3818 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Cdc40Q9DC48 Gm37363-201ENSMUST00000192336 2233 ntBASIC4.41□□□□□ -1.7
Cdc40Q9DC48 Vmn1r214-203ENSMUST00000227652 3906 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
Cdc40Q9DC48 Btbd35f15-201ENSMUST00000186329 1917 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
Cdc40Q9DC48 Trim30a-201ENSMUST00000076922 3771 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
Cdc40Q9DC48 Gabrg2-203ENSMUST00000109290 2868 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
Cdc40Q9DC48 Olfr126-202ENSMUST00000213844 1958 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
Cdc40Q9DC48 Rbm41-203ENSMUST00000113007 3691 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
Cdc40Q9DC48 Gm43920-201ENSMUST00000204953 2159 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
Cdc40Q9DC48 Fpgt-201ENSMUST00000066568 3518 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
Cdc40Q9DC48 Kif20b-201ENSMUST00000087341 5564 ntAPPRIS P2 TSL 5 BASIC4.4□□□□□ -1.71
Cdc40Q9DC48 Trappc1-203ENSMUST00000102602 751 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
Cdc40Q9DC48 Gm13491-201ENSMUST00000118267 235 ntBASIC4.4□□□□□ -1.71
Cdc40Q9DC48 Gm14082-201ENSMUST00000118582 801 ntBASIC4.4□□□□□ -1.71
Cdc40Q9DC48 Gm13132-201ENSMUST00000121194 472 ntBASIC4.4□□□□□ -1.71
Cdc40Q9DC48 Gm16019-201ENSMUST00000149538 261 ntTSL 5 BASIC4.4□□□□□ -1.71
Cdc40Q9DC48 Gm16451-201ENSMUST00000173484 924 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Cdc40Q9DC48 Gm28094-201ENSMUST00000185262 390 ntBASIC4.4□□□□□ -1.71
Cdc40Q9DC48 Gm29086-201ENSMUST00000186774 222 ntBASIC4.4□□□□□ -1.71
Cdc40Q9DC48 Gm29085-201ENSMUST00000187108 225 ntBASIC4.4□□□□□ -1.71
Cdc40Q9DC48 Gm28116-201ENSMUST00000189064 387 ntBASIC4.4□□□□□ -1.71
Cdc40Q9DC48 AV026068-210ENSMUST00000189169 877 ntTSL 5 BASIC4.4□□□□□ -1.71
Cdc40Q9DC48 Gm37571-201ENSMUST00000195048 614 ntTSL 3 BASIC4.4□□□□□ -1.71
Cdc40Q9DC48 4930539C22Rik-201ENSMUST00000198231 970 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Cdc40Q9DC48 Csn2-209ENSMUST00000199624 890 ntAPPRIS P3 TSL 5 BASIC4.4□□□□□ -1.71
Cdc40Q9DC48 Gm44402-201ENSMUST00000203677 238 ntBASIC4.4□□□□□ -1.71
Cdc40Q9DC48 Gm32536-201ENSMUST00000205209 445 ntBASIC4.4□□□□□ -1.71
Cdc40Q9DC48 Gm45236-201ENSMUST00000208632 229 ntBASIC4.4□□□□□ -1.71
Cdc40Q9DC48 Gm33501-201ENSMUST00000209257 1193 ntTSL 5 BASIC4.4□□□□□ -1.71
Cdc40Q9DC48 Rps26-ps1-202ENSMUST00000212102 351 ntBASIC4.4□□□□□ -1.71
Cdc40Q9DC48 AV026068-224ENSMUST00000224827 928 ntBASIC4.4□□□□□ -1.71
Cdc40Q9DC48 Olfr16-201ENSMUST00000038432 1050 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Cdc40Q9DC48 Olfr690-201ENSMUST00000061920 1062 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Cdc40Q9DC48 Gm16442-201ENSMUST00000079099 924 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Cdc40Q9DC48 Csn2-201ENSMUST00000082370 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
Cdc40Q9DC48 Nfyc-202ENSMUST00000097906 1008 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Cdc40Q9DC48 Zfp352-201ENSMUST00000080541 1656 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Cdc40Q9DC48 Gm37789-201ENSMUST00000192862 2889 ntBASIC4.4□□□□□ -1.71
Cdc40Q9DC48 Fbxl13-202ENSMUST00000115234 2143 ntTSL 5 BASIC4.4□□□□□ -1.71
Cdc40Q9DC48 Olfr965-203ENSMUST00000215164 1722 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Cdc40Q9DC48 AC190403.1-201ENSMUST00000224515 1325 ntBASIC4.4□□□□□ -1.71
Cdc40Q9DC48 Slco1a1-201ENSMUST00000042119 3395 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.71
Cdc40Q9DC48 Acsm3-203ENSMUST00000106527 2557 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Cdc40Q9DC48 Macc1-201ENSMUST00000048880 3818 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Cdc40Q9DC48 Ddx60-202ENSMUST00000093485 5989 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
Cdc40Q9DC48 Gm27008-201ENSMUST00000182400 1360 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Cdc40Q9DC48 Gm45235-201ENSMUST00000208016 4465 ntBASIC4.39□□□□□ -1.71
Cdc40Q9DC48 Mdga2-211ENSMUST00000222623 1449 ntTSL 5 BASIC4.39□□□□□ -1.71
Cdc40Q9DC48 Ano5-203ENSMUST00000207717 2753 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Cdc40Q9DC48 Mmp8-201ENSMUST00000018765 2425 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Cdc40Q9DC48 Gm9611-201ENSMUST00000100698 231 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Cdc40Q9DC48 Gm23746-201ENSMUST00000104229 125 ntBASIC4.39□□□□□ -1.71
Cdc40Q9DC48 H2al1n-201ENSMUST00000105137 514 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Cdc40Q9DC48 4930444P10Rik-201ENSMUST00000115367 868 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
Cdc40Q9DC48 Rps12-ps26-201ENSMUST00000117751 333 ntBASIC4.39□□□□□ -1.71
Cdc40Q9DC48 Gm14408-202ENSMUST00000126726 279 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Cdc40Q9DC48 Gm15866-201ENSMUST00000149048 785 ntTSL 5 BASIC4.39□□□□□ -1.71
Cdc40Q9DC48 Gm12707-201ENSMUST00000155789 489 ntTSL 3 BASIC4.39□□□□□ -1.71
Cdc40Q9DC48 Gm13773-201ENSMUST00000156693 583 ntTSL 3 BASIC4.39□□□□□ -1.71
Cdc40Q9DC48 Gm23171-201ENSMUST00000157159 264 ntBASIC4.39□□□□□ -1.71
Cdc40Q9DC48 Gm23902-201ENSMUST00000157571 134 ntBASIC4.39□□□□□ -1.71
Cdc40Q9DC48 Gm22726-201ENSMUST00000158089 179 ntBASIC4.39□□□□□ -1.71
Cdc40Q9DC48 Gm22940-201ENSMUST00000158560 155 ntBASIC4.39□□□□□ -1.71
Cdc40Q9DC48 Gm3633-202ENSMUST00000163102 231 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Cdc40Q9DC48 Gm17430-201ENSMUST00000171339 474 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Cdc40Q9DC48 Mir6344-201ENSMUST00000183462 104 ntBASIC4.39□□□□□ -1.71
Cdc40Q9DC48 Gm37241-201ENSMUST00000191736 523 ntBASIC4.39□□□□□ -1.71
Cdc40Q9DC48 Gm38046-201ENSMUST00000192733 550 ntBASIC4.39□□□□□ -1.71
Cdc40Q9DC48 Gm18382-201ENSMUST00000194394 582 ntBASIC4.39□□□□□ -1.71
Cdc40Q9DC48 Gm43315-201ENSMUST00000198120 313 ntBASIC4.39□□□□□ -1.71
Cdc40Q9DC48 Gm44816-201ENSMUST00000206666 477 ntBASIC4.39□□□□□ -1.71
Cdc40Q9DC48 Olfr1480-203ENSMUST00000207904 1209 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
Cdc40Q9DC48 Gm19170-201ENSMUST00000212440 1084 ntBASIC4.39□□□□□ -1.71
Cdc40Q9DC48 Olfr904-201ENSMUST00000058153 933 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Cdc40Q9DC48 Olfr1480-201ENSMUST00000072219 948 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Cdc40Q9DC48 Ear6-201ENSMUST00000074477 713 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Cdc40Q9DC48 Gm23302-201ENSMUST00000082710 100 ntBASIC4.39□□□□□ -1.71
Cdc40Q9DC48 Mir129-2-201ENSMUST00000083577 90 ntBASIC4.39□□□□□ -1.71
Cdc40Q9DC48 Kera-201ENSMUST00000105286 2280 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Cdc40Q9DC48 2700099C18Rik-204ENSMUST00000183133 1333 ntBASIC4.39□□□□□ -1.71
Cdc40Q9DC48 AC134860.3-201ENSMUST00000223564 1300 ntBASIC4.39□□□□□ -1.71
Cdc40Q9DC48 Zfy1-201ENSMUST00000065545 2783 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Cdc40Q9DC48 Gm13757-201ENSMUST00000126038 4460 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
Cdc40Q9DC48 Aadacl2-201ENSMUST00000169794 1590 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Cdc40Q9DC48 Olfr397-202ENSMUST00000213134 4048 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Cdc40Q9DC48 Gm19744-204ENSMUST00000188936 4533 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Cdc40Q9DC48 Olfr1217-202ENSMUST00000213669 3839 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 82.9 ms