Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Gm36864-201ENSMUST00000205530 684 ntAPPRIS ALT2 TSL 3 BASIC5.73□□□□□ -1.49
Ddx56Q9D0R4 Glud-ps-201ENSMUST00000206310 657 ntBASIC5.73□□□□□ -1.49
Ddx56Q9D0R4 Gm4032-201ENSMUST00000210886 487 ntBASIC5.73□□□□□ -1.49
Ddx56Q9D0R4 Ncoa7-203ENSMUST00000213836 2989 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Ddx56Q9D0R4 Gm18541-201ENSMUST00000215935 538 ntBASIC5.73□□□□□ -1.49
Ddx56Q9D0R4 Gm31931-201ENSMUST00000219666 222 ntBASIC5.73□□□□□ -1.49
Ddx56Q9D0R4 AC117656.3-205ENSMUST00000224606 1205 ntBASIC5.73□□□□□ -1.49
Ddx56Q9D0R4 AC167669.3-201ENSMUST00000224720 393 ntBASIC5.73□□□□□ -1.49
Ddx56Q9D0R4 AC154727.1-201ENSMUST00000226537 499 ntBASIC5.73□□□□□ -1.49
Ddx56Q9D0R4 Olfr1348-201ENSMUST00000086319 957 ntTSL 5 BASIC5.73□□□□□ -1.49
Ddx56Q9D0R4 Defa31-201ENSMUST00000098896 377 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Ddx56Q9D0R4 Vmn2r29-201ENSMUST00000170922 2559 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Ddx56Q9D0R4 Gm19035-201ENSMUST00000193299 1742 ntBASIC5.73□□□□□ -1.49
Ddx56Q9D0R4 Olfr1062-203ENSMUST00000217481 3726 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Ddx56Q9D0R4 4930544M13Rik-202ENSMUST00000181553 1403 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Ddx56Q9D0R4 Gm19074-201ENSMUST00000218915 1429 ntBASIC5.73□□□□□ -1.49
Ddx56Q9D0R4 Gm14391-203ENSMUST00000109056 1956 ntTSL 3 BASIC5.73□□□□□ -1.49
Ddx56Q9D0R4 Itih4-203ENSMUST00000120269 3531 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
Ddx56Q9D0R4 Agbl2-204ENSMUST00000111481 3448 ntAPPRIS P2 TSL 5 BASIC5.73□□□□□ -1.49
Ddx56Q9D0R4 Slc28a2-201ENSMUST00000028652 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Ddx56Q9D0R4 Smc2-202ENSMUST00000117280 5328 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Ddx56Q9D0R4 Olfr448-202ENSMUST00000213952 3024 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Ddx56Q9D0R4 Mdn1-211ENSMUST00000178134 17959 ntAPPRIS P2 TSL 5 BASIC5.72□□□□□ -1.49
Ddx56Q9D0R4 Btbd35f24-201ENSMUST00000178080 1941 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Ddx56Q9D0R4 9830107B12Rik-201ENSMUST00000063481 3639 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Ddx56Q9D0R4 Adgb-205ENSMUST00000179956 5218 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
Ddx56Q9D0R4 Gm43466-201ENSMUST00000197836 5214 ntBASIC5.72□□□□□ -1.49
Ddx56Q9D0R4 Pramef8-202ENSMUST00000059790 3886 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Ddx56Q9D0R4 Olfr131-202ENSMUST00000172933 1358 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
Ddx56Q9D0R4 Gm7269-201ENSMUST00000210819 1373 ntBASIC5.72□□□□□ -1.49
Ddx56Q9D0R4 Zfp607a-203ENSMUST00000205715 4031 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Ddx56Q9D0R4 Rps15a-201ENSMUST00000106588 640 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
Ddx56Q9D0R4 Lrrc69-202ENSMUST00000108276 1210 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Ddx56Q9D0R4 Gm13087-201ENSMUST00000118298 256 ntBASIC5.72□□□□□ -1.49
Ddx56Q9D0R4 Gm12873-201ENSMUST00000119988 422 ntBASIC5.72□□□□□ -1.49
Ddx56Q9D0R4 Gm12936-201ENSMUST00000121439 301 ntBASIC5.72□□□□□ -1.49
Ddx56Q9D0R4 Gm8080-201ENSMUST00000122046 1155 ntBASIC5.72□□□□□ -1.49
Ddx56Q9D0R4 Gm25489-201ENSMUST00000158727 141 ntBASIC5.72□□□□□ -1.49
Ddx56Q9D0R4 Olfr723-201ENSMUST00000164157 1006 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Ddx56Q9D0R4 Vmn1r115-201ENSMUST00000169374 888 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Ddx56Q9D0R4 Gm20648-201ENSMUST00000175815 328 ntBASIC5.72□□□□□ -1.49
Ddx56Q9D0R4 Zfp950-206ENSMUST00000178819 171 ntBASIC5.72□□□□□ -1.49
Ddx56Q9D0R4 Pafah1b1-ps1-201ENSMUST00000181263 1046 ntBASIC5.72□□□□□ -1.49
Ddx56Q9D0R4 Gm5946-201ENSMUST00000182340 970 ntBASIC5.72□□□□□ -1.49
Ddx56Q9D0R4 Snhg6-205ENSMUST00000182819 816 ntTSL 2 BASIC5.72□□□□□ -1.49
Ddx56Q9D0R4 Mir7211-201ENSMUST00000184071 63 ntBASIC5.72□□□□□ -1.49
Ddx56Q9D0R4 Gm27817-201ENSMUST00000184302 233 ntBASIC5.72□□□□□ -1.49
Ddx56Q9D0R4 Mir6412-201ENSMUST00000184477 97 ntBASIC5.72□□□□□ -1.49
Ddx56Q9D0R4 Gm29376-201ENSMUST00000189357 835 ntBASIC5.72□□□□□ -1.49
Ddx56Q9D0R4 Sprr2g-202ENSMUST00000189634 651 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Ddx56Q9D0R4 1700047L14Rik-201ENSMUST00000189659 511 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Ddx56Q9D0R4 2810025M15Rik-203ENSMUST00000189791 251 ntBASIC5.72□□□□□ -1.49
Ddx56Q9D0R4 Gm29288-201ENSMUST00000191582 901 ntBASIC5.72□□□□□ -1.49
Ddx56Q9D0R4 Gm43848-201ENSMUST00000198060 1247 ntBASIC5.72□□□□□ -1.49
Ddx56Q9D0R4 Gm42857-201ENSMUST00000200823 339 ntBASIC5.72□□□□□ -1.49
Ddx56Q9D0R4 Pomp-203ENSMUST00000201376 383 ntTSL 3 BASIC5.72□□□□□ -1.49
Ddx56Q9D0R4 Gm44673-201ENSMUST00000205692 996 ntBASIC5.72□□□□□ -1.49
Ddx56Q9D0R4 Olfr723-202ENSMUST00000206058 1078 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
Ddx56Q9D0R4 Gm18645-201ENSMUST00000209593 651 ntBASIC5.72□□□□□ -1.49
Ddx56Q9D0R4 Gm45750-201ENSMUST00000211966 354 ntBASIC5.72□□□□□ -1.49
Ddx56Q9D0R4 AC138284.2-201ENSMUST00000213982 567 ntBASIC5.72□□□□□ -1.49
Ddx56Q9D0R4 Mbd3l1-203ENSMUST00000215255 708 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
Ddx56Q9D0R4 Gm4263-201ENSMUST00000220693 1101 ntBASIC5.72□□□□□ -1.49
Ddx56Q9D0R4 Gm32300-201ENSMUST00000221735 515 ntBASIC5.72□□□□□ -1.49
Ddx56Q9D0R4 AC126673.3-201ENSMUST00000223414 3829 ntBASIC5.72□□□□□ -1.49
Ddx56Q9D0R4 AC154806.3-201ENSMUST00000227376 439 ntBASIC5.72□□□□□ -1.49
Ddx56Q9D0R4 Olfr1461-201ENSMUST00000053772 939 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Ddx56Q9D0R4 Sprr2g-201ENSMUST00000056590 650 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Ddx56Q9D0R4 Vmn1r12-201ENSMUST00000073384 924 ntAPPRIS P2 BASIC5.72□□□□□ -1.49
Ddx56Q9D0R4 Olfr724-201ENSMUST00000075030 1006 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Ddx56Q9D0R4 Olfr996-201ENSMUST00000077075 1068 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Ddx56Q9D0R4 n-R5s204-201ENSMUST00000082972 119 ntBASIC5.72□□□□□ -1.49
Ddx56Q9D0R4 Olfr1101-201ENSMUST00000099870 933 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Ddx56Q9D0R4 Dazl-201ENSMUST00000010736 2942 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Ddx56Q9D0R4 Sel1l2-202ENSMUST00000122367 2216 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Ddx56Q9D0R4 Gm13575-201ENSMUST00000142353 1520 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Ddx56Q9D0R4 9430037G07Rik-201ENSMUST00000180723 3177 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Ddx56Q9D0R4 Fat1-203ENSMUST00000189017 14651 ntTSL 5 BASIC5.72□□□□□ -1.49
Ddx56Q9D0R4 Ktn1-209ENSMUST00000187262 3913 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
Ddx56Q9D0R4 Olfr1000-203ENSMUST00000216571 2028 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Ddx56Q9D0R4 Gm14296-201ENSMUST00000099007 3823 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Ddx56Q9D0R4 2210418O10Rik-201ENSMUST00000099009 3823 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Ddx56Q9D0R4 Gm38351-201ENSMUST00000195466 2518 ntBASIC5.72□□□□□ -1.49
Ddx56Q9D0R4 Gm5844-201ENSMUST00000119417 2191 ntBASIC5.72□□□□□ -1.49
Ddx56Q9D0R4 Gm15337-201ENSMUST00000135378 3888 ntTSL 5 BASIC5.72□□□□□ -1.49
Ddx56Q9D0R4 Vmn1r71-210ENSMUST00000228561 4747 ntAPPRIS ALT2 BASIC5.72□□□□□ -1.49
Ddx56Q9D0R4 Gm43389-201ENSMUST00000196080 2595 ntBASIC5.71□□□□□ -1.49
Ddx56Q9D0R4 Fbxw28-201ENSMUST00000112039 1497 ntAPPRIS P4 TSL 1 (best) BASIC5.71□□□□□ -1.49
Ddx56Q9D0R4 Gm28322-201ENSMUST00000185627 1475 ntBASIC5.71□□□□□ -1.49
Ddx56Q9D0R4 Olfr965-203ENSMUST00000215164 1722 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
Ddx56Q9D0R4 Olfr536-201ENSMUST00000064392 3853 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Ddx56Q9D0R4 Mcf2-203ENSMUST00000101531 3671 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
Ddx56Q9D0R4 Zfp763-201ENSMUST00000087654 3407 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Ddx56Q9D0R4 Cep112-203ENSMUST00000106718 839 ntTSL 5 BASIC5.71□□□□□ -1.5
Ddx56Q9D0R4 Hspe1-ps5-201ENSMUST00000118080 297 ntBASIC5.71□□□□□ -1.5
Ddx56Q9D0R4 Gm12379-201ENSMUST00000119607 391 ntBASIC5.71□□□□□ -1.5
Ddx56Q9D0R4 Gm14913-201ENSMUST00000120011 1093 ntBASIC5.71□□□□□ -1.5
Ddx56Q9D0R4 Gm15529-201ENSMUST00000121833 994 ntBASIC5.71□□□□□ -1.5
Ddx56Q9D0R4 Gm12603-202ENSMUST00000146678 618 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Ddx56Q9D0R4 Olfr1038-ps-201ENSMUST00000149775 1209 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 67.4 ms