Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Gm35134-201ENSMUST00000194086 923 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Rpa3Q9CQ71 Gm38221-201ENSMUST00000195146 365 ntBASIC4.76□□□□□ -1.65
Rpa3Q9CQ71 Gm43678-201ENSMUST00000197774 328 ntTSL 3 BASIC4.76□□□□□ -1.65
Rpa3Q9CQ71 Gm42999-201ENSMUST00000198049 786 ntBASIC4.76□□□□□ -1.65
Rpa3Q9CQ71 Gm40323-201ENSMUST00000200649 645 ntTSL 2 BASIC4.76□□□□□ -1.65
Rpa3Q9CQ71 Gm44077-201ENSMUST00000203453 435 ntTSL 2 BASIC4.76□□□□□ -1.65
Rpa3Q9CQ71 Mitf-208ENSMUST00000203938 1074 ntTSL 5 BASIC4.76□□□□□ -1.65
Rpa3Q9CQ71 Gm45651-201ENSMUST00000210857 335 ntBASIC4.76□□□□□ -1.65
Rpa3Q9CQ71 Glipr1l1-201ENSMUST00000073617 896 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Rpa3Q9CQ71 Rabgap1-202ENSMUST00000066055 4247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
Rpa3Q9CQ71 Gm45378-201ENSMUST00000211063 2711 ntBASIC4.76□□□□□ -1.65
Rpa3Q9CQ71 Gm43831-201ENSMUST00000200461 2598 ntBASIC4.76□□□□□ -1.65
Rpa3Q9CQ71 Olfr131-202ENSMUST00000172933 1358 ntAPPRIS P1 TSL 3 BASIC4.76□□□□□ -1.65
Rpa3Q9CQ71 Vmn1r72-202ENSMUST00000209638 6501 ntAPPRIS P1 TSL 3 BASIC4.76□□□□□ -1.65
Rpa3Q9CQ71 4933434E20Rik-201ENSMUST00000029551 3097 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Rpa3Q9CQ71 Gm42681-201ENSMUST00000197999 1611 ntBASIC4.75□□□□□ -1.65
Rpa3Q9CQ71 Olfr655-203ENSMUST00000215538 2012 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Rpa3Q9CQ71 Olfr655-204ENSMUST00000216750 2010 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Rpa3Q9CQ71 Lrriq3-203ENSMUST00000194376 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
Rpa3Q9CQ71 Rbbp6-203ENSMUST00000098062 6345 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Rpa3Q9CQ71 Vmn1r1-203ENSMUST00000227629 3654 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Rpa3Q9CQ71 AC122317.3-201ENSMUST00000219320 3524 ntBASIC4.75□□□□□ -1.65
Rpa3Q9CQ71 Zfp300-201ENSMUST00000040667 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Rpa3Q9CQ71 Olfr376-203ENSMUST00000170592 3211 ntAPPRIS P3 TSL 2 BASIC4.75□□□□□ -1.65
Rpa3Q9CQ71 Gm3985-201ENSMUST00000132101 2515 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Rpa3Q9CQ71 Ighv1-36-201ENSMUST00000103513 348 ntAPPRIS ALT2 BASIC4.75□□□□□ -1.65
Rpa3Q9CQ71 Gm23014-201ENSMUST00000104144 130 ntBASIC4.75□□□□□ -1.65
Rpa3Q9CQ71 Gm11910-201ENSMUST00000121624 432 ntBASIC4.75□□□□□ -1.65
Rpa3Q9CQ71 Gm13839-201ENSMUST00000151639 506 ntTSL 2 BASIC4.75□□□□□ -1.65
Rpa3Q9CQ71 Gm16134-201ENSMUST00000161714 336 ntBASIC4.75□□□□□ -1.65
Rpa3Q9CQ71 Khdrbs2-202ENSMUST00000185666 543 ntTSL 2 BASIC4.75□□□□□ -1.65
Rpa3Q9CQ71 Gm28830-201ENSMUST00000188192 213 ntBASIC4.75□□□□□ -1.65
Rpa3Q9CQ71 Nabp1-207ENSMUST00000188204 972 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Rpa3Q9CQ71 Gm28835-202ENSMUST00000189206 543 ntTSL 3 BASIC4.75□□□□□ -1.65
Rpa3Q9CQ71 Gm42720-201ENSMUST00000196813 300 ntBASIC4.75□□□□□ -1.65
Rpa3Q9CQ71 Trav7-5-201ENSMUST00000200609 337 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Rpa3Q9CQ71 Gm34583-202ENSMUST00000202537 451 ntTSL 2 BASIC4.75□□□□□ -1.65
Rpa3Q9CQ71 Gm34224-201ENSMUST00000204606 364 ntBASIC4.75□□□□□ -1.65
Rpa3Q9CQ71 Gm18791-201ENSMUST00000204611 726 ntBASIC4.75□□□□□ -1.65
Rpa3Q9CQ71 Gm4290-201ENSMUST00000206897 814 ntBASIC4.75□□□□□ -1.65
Rpa3Q9CQ71 Gm45610-201ENSMUST00000209227 784 ntBASIC4.75□□□□□ -1.65
Rpa3Q9CQ71 Gm20586-201ENSMUST00000210122 547 ntBASIC4.75□□□□□ -1.65
Rpa3Q9CQ71 Gm45910-201ENSMUST00000212493 1003 ntBASIC4.75□□□□□ -1.65
Rpa3Q9CQ71 AC096628.1-201ENSMUST00000226060 641 ntBASIC4.75□□□□□ -1.65
Rpa3Q9CQ71 AC122035.2-201ENSMUST00000228698 462 ntBASIC4.75□□□□□ -1.65
Rpa3Q9CQ71 Olfr1325-201ENSMUST00000054541 948 ntAPPRIS P2 BASIC4.75□□□□□ -1.65
Rpa3Q9CQ71 Olfr123-201ENSMUST00000054748 930 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Rpa3Q9CQ71 Apoo-ps-201ENSMUST00000061241 586 ntBASIC4.75□□□□□ -1.65
Rpa3Q9CQ71 Wfdc17-201ENSMUST00000092836 533 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Rpa3Q9CQ71 Zfp811-201ENSMUST00000080905 1656 ntTSL 5 BASIC4.75□□□□□ -1.65
Rpa3Q9CQ71 4833421K07Rik-201ENSMUST00000206146 1391 ntBASIC4.75□□□□□ -1.65
Rpa3Q9CQ71 Cyld-204ENSMUST00000209206 4032 ntTSL 5 BASIC4.75□□□□□ -1.65
Rpa3Q9CQ71 Olfr1043-202ENSMUST00000213886 1675 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Rpa3Q9CQ71 Speer5-ps1-201ENSMUST00000169525 1430 ntBASIC4.74□□□□□ -1.65
Rpa3Q9CQ71 Spp1-202ENSMUST00000086833 1411 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
Rpa3Q9CQ71 Olfr372-202ENSMUST00000215324 3542 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Rpa3Q9CQ71 B130011K05Rik-201ENSMUST00000151765 3270 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Rpa3Q9CQ71 Gm12571-201ENSMUST00000118132 243 ntBASIC4.74□□□□□ -1.65
Rpa3Q9CQ71 Olfr660-ps1-201ENSMUST00000121526 375 ntBASIC4.74□□□□□ -1.65
Rpa3Q9CQ71 Gm12214-201ENSMUST00000151643 417 ntTSL 5 BASIC4.74□□□□□ -1.65
Rpa3Q9CQ71 Gm16114-201ENSMUST00000161930 300 ntBASIC4.74□□□□□ -1.65
Rpa3Q9CQ71 Gm21856-201ENSMUST00000187547 696 ntBASIC4.74□□□□□ -1.65
Rpa3Q9CQ71 Gm21735-201ENSMUST00000190360 696 ntBASIC4.74□□□□□ -1.65
Rpa3Q9CQ71 Gm38046-201ENSMUST00000192733 550 ntBASIC4.74□□□□□ -1.65
Rpa3Q9CQ71 AC133189.1-201ENSMUST00000198820 140 ntBASIC4.74□□□□□ -1.65
Rpa3Q9CQ71 Gm44006-201ENSMUST00000204273 396 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Rpa3Q9CQ71 Gm45359-201ENSMUST00000210635 427 ntBASIC4.74□□□□□ -1.65
Rpa3Q9CQ71 Gm10037-202ENSMUST00000221266 549 ntAPPRIS P5 TSL 2 BASIC4.74□□□□□ -1.65
Rpa3Q9CQ71 Gm33958-201ENSMUST00000222879 450 ntTSL 5 BASIC4.74□□□□□ -1.65
Rpa3Q9CQ71 AC129935.1-201ENSMUST00000226302 873 ntBASIC4.74□□□□□ -1.65
Rpa3Q9CQ71 AC122397.2-201ENSMUST00000227422 686 ntBASIC4.74□□□□□ -1.65
Rpa3Q9CQ71 Vmn1r39-206ENSMUST00000228651 2144 ntAPPRIS ALT2 BASIC4.74□□□□□ -1.65
Rpa3Q9CQ71 Crem-202ENSMUST00000049942 953 ntTSL 2 BASIC4.74□□□□□ -1.65
Rpa3Q9CQ71 Vmn1r213-202ENSMUST00000227573 3515 ntAPPRIS ALT2 BASIC4.74□□□□□ -1.65
Rpa3Q9CQ71 Glyat-202ENSMUST00000119960 3296 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Rpa3Q9CQ71 Pak3-204ENSMUST00000112865 8484 ntAPPRIS P3 TSL 5 BASIC4.74□□□□□ -1.65
Rpa3Q9CQ71 Cast-208ENSMUST00000223033 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
Rpa3Q9CQ71 Vmn1r173-202ENSMUST00000226233 9416 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Rpa3Q9CQ71 Fbxl17-204ENSMUST00000112840 3667 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Rpa3Q9CQ71 Elavl4-205ENSMUST00000106600 3799 ntTSL 5 BASIC4.74□□□□□ -1.65
Rpa3Q9CQ71 Gm15170-201ENSMUST00000121593 2023 ntBASIC4.73□□□□□ -1.65
Rpa3Q9CQ71 Gm38259-201ENSMUST00000194602 3534 ntBASIC4.73□□□□□ -1.65
Rpa3Q9CQ71 Gm20449-201ENSMUST00000094532 3847 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
Rpa3Q9CQ71 Hmcn1-201ENSMUST00000074783 17908 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Rpa3Q9CQ71 Ints12-201ENSMUST00000029650 3101 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Rpa3Q9CQ71 Cysltr1-202ENSMUST00000113480 5142 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Rpa3Q9CQ71 Havcr2-201ENSMUST00000020668 2721 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Rpa3Q9CQ71 Gm22473-201ENSMUST00000104114 132 ntBASIC4.73□□□□□ -1.65
Rpa3Q9CQ71 Gm10964-201ENSMUST00000106852 120 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Rpa3Q9CQ71 Mup6-201ENSMUST00000107517 926 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Rpa3Q9CQ71 Gm15752-201ENSMUST00000117427 394 ntBASIC4.73□□□□□ -1.65
Rpa3Q9CQ71 Gm11971-201ENSMUST00000117715 288 ntBASIC4.73□□□□□ -1.65
Rpa3Q9CQ71 Gm13924-201ENSMUST00000119899 486 ntBASIC4.73□□□□□ -1.65
Rpa3Q9CQ71 Gm9208-201ENSMUST00000120468 948 ntBASIC4.73□□□□□ -1.65
Rpa3Q9CQ71 Gm14303-201ENSMUST00000121320 171 ntBASIC4.73□□□□□ -1.65
Rpa3Q9CQ71 Gm13411-201ENSMUST00000149429 414 ntTSL 2 BASIC4.73□□□□□ -1.65
Rpa3Q9CQ71 Gm15767-202ENSMUST00000153786 544 ntTSL 3 BASIC4.73□□□□□ -1.65
Rpa3Q9CQ71 Gm15882-201ENSMUST00000161344 855 ntTSL 3 BASIC4.73□□□□□ -1.65
Rpa3Q9CQ71 Vmn2r-ps86-201ENSMUST00000174812 871 ntBASIC4.73□□□□□ -1.65
Rpa3Q9CQ71 Gm27387-201ENSMUST00000184583 116 ntBASIC4.73□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 80.7 ms