Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm7887-201ENSMUST00000056948 537 ntBASIC5.31□□□□□ -1.56
Clrn1Q8K445 Olfr198-201ENSMUST00000064452 1054 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Clrn1Q8K445 Gm24490-201ENSMUST00000083803 98 ntBASIC5.31□□□□□ -1.56
Clrn1Q8K445 Olfr570-201ENSMUST00000098215 1045 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Clrn1Q8K445 Olfr1314-201ENSMUST00000099598 939 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Clrn1Q8K445 Sult1c2-201ENSMUST00000023886 1846 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Clrn1Q8K445 4930430A15Rik-201ENSMUST00000028577 1840 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Clrn1Q8K445 Vmn1r10-202ENSMUST00000228270 2084 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Clrn1Q8K445 Olfr172-202ENSMUST00000214139 1778 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Clrn1Q8K445 Vmn2r103-201ENSMUST00000172203 2571 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Clrn1Q8K445 Vmn1r35-204ENSMUST00000227749 2254 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Clrn1Q8K445 Elavl4-201ENSMUST00000102722 4107 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
Clrn1Q8K445 Elavl4-203ENSMUST00000106597 4149 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Clrn1Q8K445 Gm14569-204ENSMUST00000169499 5181 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Clrn1Q8K445 Nlgn1-201ENSMUST00000075054 4359 ntAPPRIS P3 TSL 5 BASIC5.31□□□□□ -1.56
Clrn1Q8K445 Mef2c-203ENSMUST00000185052 3556 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Clrn1Q8K445 Fap-208ENSMUST00000174234 2211 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
Clrn1Q8K445 Vmn2r2-201ENSMUST00000077958 2484 ntAPPRIS P2 TSL 5 BASIC5.31□□□□□ -1.56
Clrn1Q8K445 Zfp9-201ENSMUST00000161170 3968 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Clrn1Q8K445 Gm8980-201ENSMUST00000140232 2197 ntBASIC5.31□□□□□ -1.56
Clrn1Q8K445 Olfr767-202ENSMUST00000213579 5493 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Clrn1Q8K445 Rsph4a-201ENSMUST00000169670 3650 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Clrn1Q8K445 Ccar1-211ENSMUST00000219527 3862 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Clrn1Q8K445 Fastkd1-201ENSMUST00000073152 2865 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Clrn1Q8K445 Tbpl2-201ENSMUST00000080453 1379 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Clrn1Q8K445 Pate3-201ENSMUST00000178236 1329 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Clrn1Q8K445 Gm42798-201ENSMUST00000200853 3972 ntBASIC5.3□□□□□ -1.56
Clrn1Q8K445 Parp4-201ENSMUST00000161553 6387 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Clrn1Q8K445 Gm7133-201ENSMUST00000187797 2039 ntBASIC5.3□□□□□ -1.56
Clrn1Q8K445 2610203C20Rik-206ENSMUST00000181814 2996 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Clrn1Q8K445 Gm33680-203ENSMUST00000219610 4117 ntTSL 3 BASIC5.3□□□□□ -1.56
Clrn1Q8K445 Chd9-202ENSMUST00000109614 11565 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
Clrn1Q8K445 Swi5-204ENSMUST00000113400 522 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Clrn1Q8K445 Mir466f-4-201ENSMUST00000116930 121 ntBASIC5.3□□□□□ -1.56
Clrn1Q8K445 Gm13733-201ENSMUST00000117290 535 ntBASIC5.3□□□□□ -1.56
Clrn1Q8K445 Olfr379-ps1-201ENSMUST00000117349 934 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Clrn1Q8K445 Gm11561-201ENSMUST00000117429 417 ntBASIC5.3□□□□□ -1.56
Clrn1Q8K445 Gm5073-201ENSMUST00000118222 820 ntBASIC5.3□□□□□ -1.56
Clrn1Q8K445 Gm13865-201ENSMUST00000120957 865 ntBASIC5.3□□□□□ -1.56
Clrn1Q8K445 Rps11-ps2-201ENSMUST00000121547 456 ntBASIC5.3□□□□□ -1.56
Clrn1Q8K445 St8sia3os-201ENSMUST00000123473 652 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Clrn1Q8K445 Gm11415-201ENSMUST00000128214 480 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Clrn1Q8K445 Gm14216-201ENSMUST00000136046 409 ntTSL 3 BASIC5.3□□□□□ -1.56
Clrn1Q8K445 Gm18199-201ENSMUST00000173820 835 ntBASIC5.3□□□□□ -1.56
Clrn1Q8K445 1700010K23Rik-201ENSMUST00000174502 376 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Clrn1Q8K445 Gm7870-201ENSMUST00000184467 616 ntBASIC5.3□□□□□ -1.56
Clrn1Q8K445 Gm29433-201ENSMUST00000191241 253 ntTSL 5 BASIC5.3□□□□□ -1.56
Clrn1Q8K445 Csn1s2a-203ENSMUST00000196749 917 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Clrn1Q8K445 Gm32754-202ENSMUST00000199504 480 ntTSL 5 BASIC5.3□□□□□ -1.56
Clrn1Q8K445 Gm19060-201ENSMUST00000201959 421 ntBASIC5.3□□□□□ -1.56
Clrn1Q8K445 Gm3189-201ENSMUST00000205595 832 ntBASIC5.3□□□□□ -1.56
Clrn1Q8K445 Gm34783-201ENSMUST00000209159 303 ntBASIC5.3□□□□□ -1.56
Clrn1Q8K445 Olfr1091-ps1-201ENSMUST00000216676 595 ntBASIC5.3□□□□□ -1.56
Clrn1Q8K445 Gm18601-201ENSMUST00000220831 634 ntBASIC5.3□□□□□ -1.56
Clrn1Q8K445 Gm36423-204ENSMUST00000222446 541 ntTSL 2 BASIC5.3□□□□□ -1.56
Clrn1Q8K445 AC168056.2-201ENSMUST00000223591 269 ntBASIC5.3□□□□□ -1.56
Clrn1Q8K445 AC154556.1-201ENSMUST00000224587 885 ntBASIC5.3□□□□□ -1.56
Clrn1Q8K445 AC112142.1-206ENSMUST00000228136 982 ntBASIC5.3□□□□□ -1.56
Clrn1Q8K445 Vmn1r70-201ENSMUST00000055847 897 ntAPPRIS P2 BASIC5.3□□□□□ -1.56
Clrn1Q8K445 Csn1s2a-201ENSMUST00000076379 920 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
Clrn1Q8K445 Cd200r3-202ENSMUST00000077178 767 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Clrn1Q8K445 A630073D07Rik-201ENSMUST00000091791 484 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
Clrn1Q8K445 Gm42702-201ENSMUST00000199515 4217 ntBASIC5.3□□□□□ -1.56
Clrn1Q8K445 Btbd35f4-201ENSMUST00000105011 1491 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Clrn1Q8K445 Cyp4a28-ps-201ENSMUST00000121884 1477 ntBASIC5.3□□□□□ -1.56
Clrn1Q8K445 Pax6os1-202ENSMUST00000149133 1464 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Clrn1Q8K445 4930444F02Rik-201ENSMUST00000215429 6871 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Clrn1Q8K445 Lrif1-203ENSMUST00000106736 1669 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Clrn1Q8K445 AC141438.1-201ENSMUST00000216055 3205 ntTSL 2 BASIC5.3□□□□□ -1.56
Clrn1Q8K445 Gm37686-201ENSMUST00000194099 2309 ntBASIC5.3□□□□□ -1.56
Clrn1Q8K445 Serpinb11-201ENSMUST00000027566 2084 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Clrn1Q8K445 Gm37846-201ENSMUST00000191840 3774 ntBASIC5.3□□□□□ -1.56
Clrn1Q8K445 Olfr1246-204ENSMUST00000217254 5411 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Clrn1Q8K445 Fam205a3-201ENSMUST00000178192 3927 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Clrn1Q8K445 Fam205a2-202ENSMUST00000180201 3927 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Clrn1Q8K445 Ascc3-206ENSMUST00000219226 1357 ntTSL 5 BASIC5.29□□□□□ -1.56
Clrn1Q8K445 Trps1-203ENSMUST00000183421 3446 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Clrn1Q8K445 Gm45149-201ENSMUST00000206459 2172 ntBASIC5.29□□□□□ -1.56
Clrn1Q8K445 Vmn1r80-206ENSMUST00000228028 6918 ntBASIC5.29□□□□□ -1.56
Clrn1Q8K445 Olfr384-202ENSMUST00000214228 2576 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Clrn1Q8K445 Zfp287-206ENSMUST00000185656 3370 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Clrn1Q8K445 Mug-ps1-201ENSMUST00000186891 4386 ntBASIC5.29□□□□□ -1.56
Clrn1Q8K445 Zfp825-203ENSMUST00000221173 1549 ntAPPRIS ALT2 TSL 3 BASIC5.29□□□□□ -1.56
Clrn1Q8K445 Gm43485-201ENSMUST00000199292 1710 ntBASIC5.29□□□□□ -1.56
Clrn1Q8K445 Olfr224-202ENSMUST00000215322 1940 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Clrn1Q8K445 AC132852.1-201ENSMUST00000214683 2324 ntBASIC5.29□□□□□ -1.56
Clrn1Q8K445 Wdr17-202ENSMUST00000127511 4668 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
Clrn1Q8K445 Zfp605-201ENSMUST00000086686 2085 ntAPPRIS P1 TSL 3 BASIC5.29□□□□□ -1.56
Clrn1Q8K445 Gm5039-202ENSMUST00000218054 1856 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
Clrn1Q8K445 Olfr351-201ENSMUST00000100150 933 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Clrn1Q8K445 Igkv16-104-201ENSMUST00000103323 378 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Clrn1Q8K445 Sub1-202ENSMUST00000110504 675 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Clrn1Q8K445 Pbsn-202ENSMUST00000114041 697 ntTSL 2 BASIC5.29□□□□□ -1.56
Clrn1Q8K445 Gm23839-201ENSMUST00000116957 109 ntBASIC5.29□□□□□ -1.56
Clrn1Q8K445 Atp5l2-ps-201ENSMUST00000120130 312 ntBASIC5.29□□□□□ -1.56
Clrn1Q8K445 Fyttd1-202ENSMUST00000120345 648 ntTSL 5 BASIC5.29□□□□□ -1.56
Clrn1Q8K445 Gm14982-201ENSMUST00000121102 442 ntBASIC5.29□□□□□ -1.56
Clrn1Q8K445 Gm12732-201ENSMUST00000121688 180 ntBASIC5.29□□□□□ -1.56
Clrn1Q8K445 Gm24383-201ENSMUST00000122691 333 ntBASIC5.29□□□□□ -1.56
Clrn1Q8K445 Rrm2b-203ENSMUST00000137636 900 ntTSL 5 BASIC5.29□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 120.4 ms