Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Tmem72-201ENSMUST00000056623 17152 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Brf1Q8CFK2 AC153494.1-201ENSMUST00000218664 3041 ntBASIC6.09□□□□□ -1.43
Brf1Q8CFK2 Alg11-201ENSMUST00000072572 4960 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Brf1Q8CFK2 Zfp65-201ENSMUST00000073157 3957 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Brf1Q8CFK2 Gm2539-201ENSMUST00000180720 2411 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Brf1Q8CFK2 Gm3383-202ENSMUST00000112758 1813 ntAPPRIS P5 TSL 5 BASIC6.09□□□□□ -1.43
Brf1Q8CFK2 Gm3194-202ENSMUST00000180867 1813 ntAPPRIS P5 TSL 5 BASIC6.09□□□□□ -1.43
Brf1Q8CFK2 Olfr1505-202ENSMUST00000216623 3567 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Brf1Q8CFK2 Gm7233-201ENSMUST00000168619 1761 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Brf1Q8CFK2 Tubal3-201ENSMUST00000021639 3096 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Brf1Q8CFK2 Cep112os1-201ENSMUST00000137907 3005 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Brf1Q8CFK2 Gm37010-201ENSMUST00000194539 1704 ntBASIC6.09□□□□□ -1.43
Brf1Q8CFK2 Igkv10-94-201ENSMUST00000103330 347 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Brf1Q8CFK2 Gm25419-201ENSMUST00000104215 191 ntBASIC6.09□□□□□ -1.43
Brf1Q8CFK2 Mir292-201ENSMUST00000104847 82 ntBASIC6.09□□□□□ -1.43
Brf1Q8CFK2 Gm2030-201ENSMUST00000119590 1129 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Brf1Q8CFK2 Gm13788-201ENSMUST00000120767 601 ntBASIC6.09□□□□□ -1.43
Brf1Q8CFK2 Gm12162-201ENSMUST00000123422 154 ntTSL 5 BASIC6.09□□□□□ -1.43
Brf1Q8CFK2 Platr16-202ENSMUST00000150529 545 ntTSL 3 BASIC6.09□□□□□ -1.43
Brf1Q8CFK2 Gm21973-201ENSMUST00000157020 358 ntAPPRIS P1 TSL 3 BASIC6.09□□□□□ -1.43
Brf1Q8CFK2 Snora81-201ENSMUST00000157310 178 ntBASIC6.09□□□□□ -1.43
Brf1Q8CFK2 Gm24962-201ENSMUST00000157917 109 ntBASIC6.09□□□□□ -1.43
Brf1Q8CFK2 Plgrkt-201ENSMUST00000016639 1012 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Brf1Q8CFK2 Gm22693-201ENSMUST00000175049 442 ntBASIC6.09□□□□□ -1.43
Brf1Q8CFK2 Gm29318-201ENSMUST00000185308 975 ntTSL 5 BASIC6.09□□□□□ -1.43
Brf1Q8CFK2 1700027A15Rik-201ENSMUST00000185768 321 ntTSL 5 BASIC6.09□□□□□ -1.43
Brf1Q8CFK2 C4bp-ps1-201ENSMUST00000189393 706 ntBASIC6.09□□□□□ -1.43
Brf1Q8CFK2 Gm29454-201ENSMUST00000190805 393 ntBASIC6.09□□□□□ -1.43
Brf1Q8CFK2 1700031M16Rik-207ENSMUST00000191513 847 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Brf1Q8CFK2 Ighv3-4-201ENSMUST00000193408 353 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Brf1Q8CFK2 AL645522.1-201ENSMUST00000197692 104 ntBASIC6.09□□□□□ -1.43
Brf1Q8CFK2 Gm43408-201ENSMUST00000198263 440 ntBASIC6.09□□□□□ -1.43
Brf1Q8CFK2 Gm32453-201ENSMUST00000204183 456 ntBASIC6.09□□□□□ -1.43
Brf1Q8CFK2 Gm33962-202ENSMUST00000205195 630 ntTSL 5 BASIC6.09□□□□□ -1.43
Brf1Q8CFK2 Gm21885-202ENSMUST00000208510 775 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Brf1Q8CFK2 Olfr752-ps1-201ENSMUST00000208736 1141 ntBASIC6.09□□□□□ -1.43
Brf1Q8CFK2 Gm3912-203ENSMUST00000211024 367 ntBASIC6.09□□□□□ -1.43
Brf1Q8CFK2 AC137127.3-201ENSMUST00000213340 349 ntBASIC6.09□□□□□ -1.43
Brf1Q8CFK2 Gm8264-201ENSMUST00000217801 465 ntBASIC6.09□□□□□ -1.43
Brf1Q8CFK2 9430078K24Rik-202ENSMUST00000219857 348 ntTSL 3 BASIC6.09□□□□□ -1.43
Brf1Q8CFK2 Gm26571-203ENSMUST00000221865 555 ntTSL 2 BASIC6.09□□□□□ -1.43
Brf1Q8CFK2 Gm26861-206ENSMUST00000222633 1039 ntTSL 5 BASIC6.09□□□□□ -1.43
Brf1Q8CFK2 AC154283.1-201ENSMUST00000228417 389 ntBASIC6.09□□□□□ -1.43
Brf1Q8CFK2 AC161269.1-201ENSMUST00000228426 318 ntBASIC6.09□□□□□ -1.43
Brf1Q8CFK2 CT030684.2-201ENSMUST00000228946 826 ntBASIC6.09□□□□□ -1.43
Brf1Q8CFK2 Olfr1461-201ENSMUST00000053772 939 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Brf1Q8CFK2 Dnah12-202ENSMUST00000073309 611 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Brf1Q8CFK2 Olfr792-201ENSMUST00000076575 936 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Brf1Q8CFK2 Olfr191-201ENSMUST00000078517 930 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Brf1Q8CFK2 Olfr310-201ENSMUST00000081918 1082 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Brf1Q8CFK2 Olfr679-201ENSMUST00000098158 952 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Brf1Q8CFK2 Olfr1039-201ENSMUST00000099910 960 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Brf1Q8CFK2 Lrrtm4-202ENSMUST00000126005 3733 ntTSL 5 BASIC6.09□□□□□ -1.43
Brf1Q8CFK2 Mdn1-211ENSMUST00000178134 17959 ntAPPRIS P2 TSL 5 BASIC6.09□□□□□ -1.43
Brf1Q8CFK2 Slamf7-203ENSMUST00000192195 3975 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
Brf1Q8CFK2 AC153532.3-201ENSMUST00000218660 3848 ntBASIC6.09□□□□□ -1.44
Brf1Q8CFK2 Slc22a29-201ENSMUST00000113298 2271 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
Brf1Q8CFK2 Olfr1444-202ENSMUST00000213606 1872 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.44
Brf1Q8CFK2 Olfr198-202ENSMUST00000208244 2200 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.44
Brf1Q8CFK2 Ccar1-201ENSMUST00000020268 4352 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
Brf1Q8CFK2 Gm7073-203ENSMUST00000190178 1419 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Brf1Q8CFK2 Gulp1-206ENSMUST00000162600 2798 ntTSL 5 BASIC6.08□□□□□ -1.44
Brf1Q8CFK2 Cbll1-205ENSMUST00000188326 1399 ntTSL 2 BASIC6.08□□□□□ -1.44
Brf1Q8CFK2 Gm43121-201ENSMUST00000199065 1305 ntBASIC6.08□□□□□ -1.44
Brf1Q8CFK2 Clca4b-201ENSMUST00000098549 2997 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Brf1Q8CFK2 Gm37041-201ENSMUST00000195873 3853 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Brf1Q8CFK2 Vmn2r29-201ENSMUST00000170922 2559 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Brf1Q8CFK2 Gm3962-201ENSMUST00000173027 2587 ntBASIC6.08□□□□□ -1.44
Brf1Q8CFK2 Bclaf1-201ENSMUST00000043881 5437 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Brf1Q8CFK2 Olfr355-201ENSMUST00000100147 933 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Brf1Q8CFK2 Trav2-201ENSMUST00000103568 325 ntAPPRIS ALT2 BASIC6.08□□□□□ -1.44
Brf1Q8CFK2 Prl2c2-201ENSMUST00000110594 842 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Brf1Q8CFK2 Defb42-202ENSMUST00000111203 567 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
Brf1Q8CFK2 Gm12636-201ENSMUST00000117395 624 ntBASIC6.08□□□□□ -1.44
Brf1Q8CFK2 Gm11991-201ENSMUST00000119652 1074 ntBASIC6.08□□□□□ -1.44
Brf1Q8CFK2 Gm13080-201ENSMUST00000120556 420 ntBASIC6.08□□□□□ -1.44
Brf1Q8CFK2 Gm15141-201ENSMUST00000121860 729 ntBASIC6.08□□□□□ -1.44
Brf1Q8CFK2 Gm15116-201ENSMUST00000122248 663 ntBASIC6.08□□□□□ -1.44
Brf1Q8CFK2 Gm15656-201ENSMUST00000132076 615 ntTSL 3 BASIC6.08□□□□□ -1.44
Brf1Q8CFK2 Gm15522-201ENSMUST00000134467 785 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Brf1Q8CFK2 5730412P04Rik-201ENSMUST00000147100 1149 ntTSL 5 BASIC6.08□□□□□ -1.44
Brf1Q8CFK2 Gm11846-201ENSMUST00000155156 515 ntTSL 2 BASIC6.08□□□□□ -1.44
Brf1Q8CFK2 Gm17044-201ENSMUST00000168549 828 ntBASIC6.08□□□□□ -1.44
Brf1Q8CFK2 Gm21820-201ENSMUST00000179056 1083 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Brf1Q8CFK2 Mir3473g-201ENSMUST00000183494 136 ntBASIC6.08□□□□□ -1.44
Brf1Q8CFK2 Mir6416-201ENSMUST00000183664 117 ntBASIC6.08□□□□□ -1.44
Brf1Q8CFK2 Gm28619-201ENSMUST00000185889 622 ntTSL 5 BASIC6.08□□□□□ -1.44
Brf1Q8CFK2 Gm28426-201ENSMUST00000187385 620 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Brf1Q8CFK2 Gm21803-201ENSMUST00000188897 693 ntBASIC6.08□□□□□ -1.44
Brf1Q8CFK2 1700006P03Rik-201ENSMUST00000191810 409 ntBASIC6.08□□□□□ -1.44
Brf1Q8CFK2 4930535G08Rik-201ENSMUST00000192017 425 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Brf1Q8CFK2 Gm18752-202ENSMUST00000193627 587 ntTSL 3 BASIC6.08□□□□□ -1.44
Brf1Q8CFK2 Gm5842-201ENSMUST00000195073 622 ntBASIC6.08□□□□□ -1.44
Brf1Q8CFK2 Gm44456-201ENSMUST00000196554 89 ntBASIC6.08□□□□□ -1.44
Brf1Q8CFK2 Gm43848-201ENSMUST00000198060 1247 ntBASIC6.08□□□□□ -1.44
Brf1Q8CFK2 Gm2762-205ENSMUST00000202366 356 ntTSL 3 BASIC6.08□□□□□ -1.44
Brf1Q8CFK2 Gm19617-201ENSMUST00000202977 308 ntBASIC6.08□□□□□ -1.44
Brf1Q8CFK2 Gm43968-201ENSMUST00000203388 389 ntBASIC6.08□□□□□ -1.44
Brf1Q8CFK2 Gm35216-201ENSMUST00000203777 433 ntTSL 2 BASIC6.08□□□□□ -1.44
Brf1Q8CFK2 Gm44646-201ENSMUST00000205847 421 ntTSL 2 BASIC6.08□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 137 ms