Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 AC166574.7-201ENSMUST00000228502 704 ntBASIC4.65□□□□□ -1.67
Ccdc28aQ8CEI3 Ssxb1-201ENSMUST00000037297 875 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Ccdc28aQ8CEI3 Gm17540-201ENSMUST00000181617 1528 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Ccdc28aQ8CEI3 4930562D21Rik-201ENSMUST00000123894 1750 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Ccdc28aQ8CEI3 Gm37363-201ENSMUST00000192336 2233 ntBASIC4.65□□□□□ -1.67
Ccdc28aQ8CEI3 B230334C09Rik-201ENSMUST00000200255 8927 ntBASIC4.65□□□□□ -1.67
Ccdc28aQ8CEI3 Olfr788-202ENSMUST00000213222 4747 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Ccdc28aQ8CEI3 Gm43059-201ENSMUST00000202437 1388 ntBASIC4.65□□□□□ -1.67
Ccdc28aQ8CEI3 Gm7451-201ENSMUST00000208382 1392 ntBASIC4.65□□□□□ -1.67
Ccdc28aQ8CEI3 Olfr887-202ENSMUST00000212502 6281 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Ccdc28aQ8CEI3 Gm13100-201ENSMUST00000117157 1439 ntBASIC4.64□□□□□ -1.67
Ccdc28aQ8CEI3 Olfr823-202ENSMUST00000213145 1431 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Ccdc28aQ8CEI3 Gm45211-201ENSMUST00000206208 2650 ntBASIC4.64□□□□□ -1.67
Ccdc28aQ8CEI3 6720464F23Rik-201ENSMUST00000193946 3496 ntBASIC4.64□□□□□ -1.67
Ccdc28aQ8CEI3 Olfr1309-206ENSMUST00000217452 5257 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Ccdc28aQ8CEI3 Mmp16-201ENSMUST00000029881 5011 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Ccdc28aQ8CEI3 Pde1a-206ENSMUST00000102655 4258 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Ccdc28aQ8CEI3 Fcrl5-203ENSMUST00000178261 1791 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
Ccdc28aQ8CEI3 Olfr1493-ps1-201ENSMUST00000207208 1777 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Ccdc28aQ8CEI3 Gm12887-201ENSMUST00000106265 360 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Ccdc28aQ8CEI3 Gm15297-201ENSMUST00000117795 290 ntBASIC4.64□□□□□ -1.67
Ccdc28aQ8CEI3 Gm14610-201ENSMUST00000118358 966 ntBASIC4.64□□□□□ -1.67
Ccdc28aQ8CEI3 Csnk2a1-ps-201ENSMUST00000118846 1175 ntBASIC4.64□□□□□ -1.67
Ccdc28aQ8CEI3 Gm12719-201ENSMUST00000118859 241 ntBASIC4.64□□□□□ -1.67
Ccdc28aQ8CEI3 Olfr1003-ps1-201ENSMUST00000122238 717 ntBASIC4.64□□□□□ -1.67
Ccdc28aQ8CEI3 Ufm1-202ENSMUST00000122330 637 ntTSL 2 BASIC4.64□□□□□ -1.67
Ccdc28aQ8CEI3 Gm12974-201ENSMUST00000129875 333 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Ccdc28aQ8CEI3 Gm12711-201ENSMUST00000131249 340 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Ccdc28aQ8CEI3 Gm13662-201ENSMUST00000157059 712 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Ccdc28aQ8CEI3 Gm22243-201ENSMUST00000178754 120 ntBASIC4.64□□□□□ -1.67
Ccdc28aQ8CEI3 Gm28998-201ENSMUST00000186194 919 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Ccdc28aQ8CEI3 Gm28576-201ENSMUST00000189007 919 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Ccdc28aQ8CEI3 Gm28190-201ENSMUST00000189766 722 ntBASIC4.64□□□□□ -1.67
Ccdc28aQ8CEI3 Gm43768-201ENSMUST00000198380 1258 ntBASIC4.64□□□□□ -1.67
Ccdc28aQ8CEI3 AC118733.1-201ENSMUST00000217387 1217 ntBASIC4.64□□□□□ -1.67
Ccdc28aQ8CEI3 Gm18409-202ENSMUST00000220105 529 ntBASIC4.64□□□□□ -1.67
Ccdc28aQ8CEI3 AC153370.1-201ENSMUST00000220296 635 ntTSL 5 BASIC4.64□□□□□ -1.67
Ccdc28aQ8CEI3 AC116724.1-201ENSMUST00000227900 972 ntBASIC4.64□□□□□ -1.67
Ccdc28aQ8CEI3 Gtpbp8-201ENSMUST00000023348 836 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Ccdc28aQ8CEI3 Olfr816-201ENSMUST00000071605 939 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Ccdc28aQ8CEI3 Vmn1r169-203ENSMUST00000227547 2322 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Ccdc28aQ8CEI3 AI314180-203ENSMUST00000107557 4946 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
Ccdc28aQ8CEI3 Gm38032-201ENSMUST00000195052 1589 ntBASIC4.64□□□□□ -1.67
Ccdc28aQ8CEI3 Nfatc3-202ENSMUST00000211991 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
Ccdc28aQ8CEI3 Vmn1r43-205ENSMUST00000228709 12646 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Ccdc28aQ8CEI3 Gm45517-201ENSMUST00000209973 2468 ntBASIC4.64□□□□□ -1.67
Ccdc28aQ8CEI3 Olfr270-203ENSMUST00000215010 2502 ntAPPRIS ALT1 TSL 5 BASIC4.64□□□□□ -1.67
Ccdc28aQ8CEI3 Olfr629-203ENSMUST00000216300 2277 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Ccdc28aQ8CEI3 Fbxl17-204ENSMUST00000112840 3667 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Ccdc28aQ8CEI3 Olfr980-202ENSMUST00000216463 3050 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Ccdc28aQ8CEI3 Vmn1r171-203ENSMUST00000226321 3067 ntAPPRIS ALT2 BASIC4.63□□□□□ -1.67
Ccdc28aQ8CEI3 Zfp300-201ENSMUST00000040667 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Ccdc28aQ8CEI3 BB287469-201ENSMUST00000110149 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Ccdc28aQ8CEI3 Gm4027-201ENSMUST00000164838 1850 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Ccdc28aQ8CEI3 Zfp266-202ENSMUST00000174462 6283 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Ccdc28aQ8CEI3 Gm25096-201ENSMUST00000104043 129 ntBASIC4.63□□□□□ -1.67
Ccdc28aQ8CEI3 Synj2bp-202ENSMUST00000114201 1121 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Ccdc28aQ8CEI3 Xlr5d-ps-201ENSMUST00000117501 782 ntBASIC4.63□□□□□ -1.67
Ccdc28aQ8CEI3 Gm15670-201ENSMUST00000117740 447 ntBASIC4.63□□□□□ -1.67
Ccdc28aQ8CEI3 Gm11262-201ENSMUST00000119326 833 ntBASIC4.63□□□□□ -1.67
Ccdc28aQ8CEI3 Gm14122-201ENSMUST00000122076 973 ntBASIC4.63□□□□□ -1.67
Ccdc28aQ8CEI3 1700092C17Rik-201ENSMUST00000135792 424 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Ccdc28aQ8CEI3 Gm21973-201ENSMUST00000157020 358 ntAPPRIS P1 TSL 3 BASIC4.63□□□□□ -1.67
Ccdc28aQ8CEI3 Gm23327-201ENSMUST00000157420 78 ntBASIC4.63□□□□□ -1.67
Ccdc28aQ8CEI3 Gm23902-201ENSMUST00000157571 134 ntBASIC4.63□□□□□ -1.67
Ccdc28aQ8CEI3 4933440J02Rik-201ENSMUST00000181547 1144 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Ccdc28aQ8CEI3 Gm27543-201ENSMUST00000183562 177 ntBASIC4.63□□□□□ -1.67
Ccdc28aQ8CEI3 Il20-202ENSMUST00000188581 465 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Ccdc28aQ8CEI3 Gm29138-201ENSMUST00000191444 348 ntBASIC4.63□□□□□ -1.67
Ccdc28aQ8CEI3 Gm5288-201ENSMUST00000198323 1119 ntBASIC4.63□□□□□ -1.67
Ccdc28aQ8CEI3 Igkv4-56-201ENSMUST00000198436 349 ntBASIC4.63□□□□□ -1.67
Ccdc28aQ8CEI3 Gm44278-201ENSMUST00000204082 312 ntTSL 2 BASIC4.63□□□□□ -1.67
Ccdc28aQ8CEI3 Gm32846-201ENSMUST00000205665 842 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Ccdc28aQ8CEI3 Gm18127-201ENSMUST00000208479 725 ntBASIC4.63□□□□□ -1.67
Ccdc28aQ8CEI3 Olfr574-202ENSMUST00000211329 1039 ntAPPRIS ALT2 BASIC4.63□□□□□ -1.67
Ccdc28aQ8CEI3 CT025617.1-201ENSMUST00000216487 725 ntTSL 5 BASIC4.63□□□□□ -1.67
Ccdc28aQ8CEI3 Olfr153-201ENSMUST00000217113 1258 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Ccdc28aQ8CEI3 AC152062.1-201ENSMUST00000218129 386 ntBASIC4.63□□□□□ -1.67
Ccdc28aQ8CEI3 AC165164.1-202ENSMUST00000219324 649 ntTSL 3 BASIC4.63□□□□□ -1.67
Ccdc28aQ8CEI3 AC117237.1-201ENSMUST00000224035 395 ntBASIC4.63□□□□□ -1.67
Ccdc28aQ8CEI3 Olfr1497-201ENSMUST00000061993 945 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Ccdc28aQ8CEI3 Olfr18-201ENSMUST00000086473 1156 ntAPPRIS P2 TSL 1 (best) BASIC4.63□□□□□ -1.67
Ccdc28aQ8CEI3 Olfr1143-201ENSMUST00000090708 945 ntBASIC4.63□□□□□ -1.67
Ccdc28aQ8CEI3 Nfyc-202ENSMUST00000097906 1008 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Ccdc28aQ8CEI3 Nebl-202ENSMUST00000124270 8079 ntTSL 5 BASIC4.63□□□□□ -1.67
Ccdc28aQ8CEI3 Gm2033-201ENSMUST00000210753 2287 ntBASIC4.63□□□□□ -1.67
Ccdc28aQ8CEI3 Vmn1r214-203ENSMUST00000227652 3906 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Ccdc28aQ8CEI3 Zfp101-204ENSMUST00000174512 3743 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Ccdc28aQ8CEI3 Gm37461-201ENSMUST00000193929 3704 ntBASIC4.63□□□□□ -1.67
Ccdc28aQ8CEI3 Ktn1-201ENSMUST00000022391 4484 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
Ccdc28aQ8CEI3 Olfr970-203ENSMUST00000215922 1739 ntAPPRIS P1 TSL 3 BASIC4.63□□□□□ -1.67
Ccdc28aQ8CEI3 Ccnb3-202ENSMUST00000115752 4554 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Ccdc28aQ8CEI3 Gm30302-202ENSMUST00000220773 3511 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Ccdc28aQ8CEI3 Vmn1r21-201ENSMUST00000203310 1779 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
Ccdc28aQ8CEI3 Vsig4-201ENSMUST00000050707 1432 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Ccdc28aQ8CEI3 Olfr1217-203ENSMUST00000214022 3947 ntAPPRIS P1 TSL 3 BASIC4.63□□□□□ -1.67
Ccdc28aQ8CEI3 Zfp967-202ENSMUST00000178443 1458 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
Ccdc28aQ8CEI3 Zfp969-203ENSMUST00000179061 1458 ntAPPRIS P1 TSL 3 BASIC4.62□□□□□ -1.67
Ccdc28aQ8CEI3 Vmn1r14-204ENSMUST00000227768 7005 ntAPPRIS P2 BASIC4.62□□□□□ -1.67
Ccdc28aQ8CEI3 AC113059.2-201ENSMUST00000213462 3016 ntBASIC4.62□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 87.8 ms