Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Gm42723-202ENSMUST00000200561 1254 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Trim40Q3UWA4 Gm2762-204ENSMUST00000201815 537 ntTSL 3 BASIC4.45□□□□□ -1.7
Trim40Q3UWA4 Gm20586-201ENSMUST00000210122 547 ntBASIC4.45□□□□□ -1.7
Trim40Q3UWA4 Gm8556-201ENSMUST00000210437 664 ntBASIC4.45□□□□□ -1.7
Trim40Q3UWA4 Gm19170-201ENSMUST00000212440 1084 ntBASIC4.45□□□□□ -1.7
Trim40Q3UWA4 Gm46192-201ENSMUST00000217894 326 ntBASIC4.45□□□□□ -1.7
Trim40Q3UWA4 Gm40662-201ENSMUST00000222208 453 ntTSL 5 BASIC4.45□□□□□ -1.7
Trim40Q3UWA4 Gm40662-202ENSMUST00000222263 487 ntTSL 5 BASIC4.45□□□□□ -1.7
Trim40Q3UWA4 AC165283.1-201ENSMUST00000223390 307 ntBASIC4.45□□□□□ -1.7
Trim40Q3UWA4 Serpinb3d-201ENSMUST00000023861 1216 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Trim40Q3UWA4 C130073F10Rik-201ENSMUST00000051043 913 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Trim40Q3UWA4 Olfr1302-201ENSMUST00000054004 948 ntAPPRIS P2 BASIC4.45□□□□□ -1.7
Trim40Q3UWA4 Olfr99-201ENSMUST00000077585 918 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Trim40Q3UWA4 Mrgprb3-201ENSMUST00000094383 1009 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Trim40Q3UWA4 Kcnj1-201ENSMUST00000047334 2987 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Trim40Q3UWA4 Gm42598-201ENSMUST00000200110 2437 ntBASIC4.45□□□□□ -1.7
Trim40Q3UWA4 Tmem207-201ENSMUST00000165687 1538 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
Trim40Q3UWA4 Gm28183-201ENSMUST00000191321 1406 ntTSL 5 BASIC4.45□□□□□ -1.7
Trim40Q3UWA4 Cyp7a1-201ENSMUST00000029905 4172 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Trim40Q3UWA4 Ccr9-205ENSMUST00000180093 4239 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Trim40Q3UWA4 Vmn1r43-203ENSMUST00000226741 12542 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Trim40Q3UWA4 Kera-201ENSMUST00000105286 2280 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Trim40Q3UWA4 Ncoa7-207ENSMUST00000215740 7043 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
Trim40Q3UWA4 Hnrnpr-207ENSMUST00000148843 21452 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Trim40Q3UWA4 Tenm1-203ENSMUST00000115059 12879 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
Trim40Q3UWA4 Vmn2r51-201ENSMUST00000094863 2559 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Trim40Q3UWA4 Vmn1r214-203ENSMUST00000227652 3906 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Trim40Q3UWA4 Pdc-202ENSMUST00000185698 3335 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Trim40Q3UWA4 Txndc8-201ENSMUST00000102897 620 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Trim40Q3UWA4 Trav12n-1-201ENSMUST00000103587 344 ntAPPRIS ALT2 BASIC4.44□□□□□ -1.7
Trim40Q3UWA4 Olfr475-ps1-201ENSMUST00000117982 932 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Trim40Q3UWA4 Anp32-ps-201ENSMUST00000118265 388 ntBASIC4.44□□□□□ -1.7
Trim40Q3UWA4 Gm15745-201ENSMUST00000119807 115 ntBASIC4.44□□□□□ -1.7
Trim40Q3UWA4 Hspe1-ps6-201ENSMUST00000120275 283 ntBASIC4.44□□□□□ -1.7
Trim40Q3UWA4 Rpl27-ps2-201ENSMUST00000120378 399 ntBASIC4.44□□□□□ -1.7
Trim40Q3UWA4 Gm11385-201ENSMUST00000121513 570 ntBASIC4.44□□□□□ -1.7
Trim40Q3UWA4 Gm12893-201ENSMUST00000121732 275 ntBASIC4.44□□□□□ -1.7
Trim40Q3UWA4 Gm2182-201ENSMUST00000145243 663 ntBASIC4.44□□□□□ -1.7
Trim40Q3UWA4 Gm12753-201ENSMUST00000152086 653 ntTSL 3 BASIC4.44□□□□□ -1.7
Trim40Q3UWA4 Gm24636-201ENSMUST00000158673 288 ntBASIC4.44□□□□□ -1.7
Trim40Q3UWA4 Gas5-209ENSMUST00000159663 346 ntTSL 3 BASIC4.44□□□□□ -1.7
Trim40Q3UWA4 Gm15508-201ENSMUST00000160330 325 ntBASIC4.44□□□□□ -1.7
Trim40Q3UWA4 Gm3076-201ENSMUST00000161613 451 ntBASIC4.44□□□□□ -1.7
Trim40Q3UWA4 Vmn1r116-201ENSMUST00000164288 924 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Trim40Q3UWA4 I0C0044D17Rik-202ENSMUST00000168045 510 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Trim40Q3UWA4 Vmn1r152-201ENSMUST00000168326 924 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Trim40Q3UWA4 Vmn1r95-201ENSMUST00000168984 924 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Trim40Q3UWA4 Vmn1r104-201ENSMUST00000169689 924 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Trim40Q3UWA4 Vmn1r143-201ENSMUST00000171622 924 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Trim40Q3UWA4 Gm20389-201ENSMUST00000174217 1006 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Trim40Q3UWA4 Rpl9-ps5-201ENSMUST00000174221 571 ntBASIC4.44□□□□□ -1.7
Trim40Q3UWA4 Gm25037-201ENSMUST00000175418 110 ntBASIC4.44□□□□□ -1.7
Trim40Q3UWA4 Trav12d-1-202ENSMUST00000183652 344 ntAPPRIS ALT2 BASIC4.44□□□□□ -1.7
Trim40Q3UWA4 Mrgprb9-ps-201ENSMUST00000188739 892 ntBASIC4.44□□□□□ -1.7
Trim40Q3UWA4 Gm28116-201ENSMUST00000189064 387 ntBASIC4.44□□□□□ -1.7
Trim40Q3UWA4 Gm8241-201ENSMUST00000189286 816 ntBASIC4.44□□□□□ -1.7
Trim40Q3UWA4 Gm29020-201ENSMUST00000191166 290 ntTSL 5 BASIC4.44□□□□□ -1.7
Trim40Q3UWA4 4930433B08Rik-201ENSMUST00000192010 644 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Trim40Q3UWA4 C030032O16Rik-201ENSMUST00000196427 716 ntBASIC4.44□□□□□ -1.7
Trim40Q3UWA4 BX530055.1-201ENSMUST00000197285 122 ntBASIC4.44□□□□□ -1.7
Trim40Q3UWA4 Pomp-203ENSMUST00000201376 383 ntTSL 3 BASIC4.44□□□□□ -1.7
Trim40Q3UWA4 Gm44137-201ENSMUST00000203670 367 ntBASIC4.44□□□□□ -1.7
Trim40Q3UWA4 Gm44656-201ENSMUST00000208428 490 ntBASIC4.44□□□□□ -1.7
Trim40Q3UWA4 Sult2a7-203ENSMUST00000210034 870 ntTSL 5 BASIC4.44□□□□□ -1.7
Trim40Q3UWA4 Olfr494-202ENSMUST00000210291 947 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Trim40Q3UWA4 Gm45608-201ENSMUST00000210948 389 ntBASIC4.44□□□□□ -1.7
Trim40Q3UWA4 Gm45261-201ENSMUST00000211023 594 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Trim40Q3UWA4 AC153912.1-201ENSMUST00000217011 724 ntAPPRIS P1 TSL 3 BASIC4.44□□□□□ -1.7
Trim40Q3UWA4 Gm31698-203ENSMUST00000217115 690 ntTSL 5 BASIC4.44□□□□□ -1.7
Trim40Q3UWA4 Fabp2-201ENSMUST00000023820 965 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Trim40Q3UWA4 Olfr1325-201ENSMUST00000054541 948 ntAPPRIS P2 BASIC4.44□□□□□ -1.7
Trim40Q3UWA4 Olfr816-201ENSMUST00000071605 939 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Trim40Q3UWA4 Olfr898-201ENSMUST00000076504 951 ntAPPRIS P2 BASIC4.44□□□□□ -1.7
Trim40Q3UWA4 Olfr196-201ENSMUST00000077027 930 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Trim40Q3UWA4 Gm25005-201ENSMUST00000083812 156 ntBASIC4.44□□□□□ -1.7
Trim40Q3UWA4 Gm24917-201ENSMUST00000083935 104 ntBASIC4.44□□□□□ -1.7
Trim40Q3UWA4 Gm10441-201ENSMUST00000200950 1546 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Trim40Q3UWA4 Akap4-201ENSMUST00000057101 2851 ntAPPRIS P4 TSL 1 (best) BASIC4.44□□□□□ -1.7
Trim40Q3UWA4 Olfr951-202ENSMUST00000216107 1947 ntAPPRIS ALT2 TSL 3 BASIC4.44□□□□□ -1.7
Trim40Q3UWA4 Postn-201ENSMUST00000073012 3189 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
Trim40Q3UWA4 Olfr149-202ENSMUST00000215192 2806 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Trim40Q3UWA4 Vmn1r169-202ENSMUST00000226669 2326 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Trim40Q3UWA4 Clec4a1-201ENSMUST00000060484 1558 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Trim40Q3UWA4 1700017N19Rik-206ENSMUST00000190386 1483 ntTSL 5 BASIC4.43□□□□□ -1.7
Trim40Q3UWA4 Vmn1r14-204ENSMUST00000227768 7005 ntAPPRIS P2 BASIC4.43□□□□□ -1.7
Trim40Q3UWA4 Fbxl17-204ENSMUST00000112840 3667 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Trim40Q3UWA4 Jpx-201ENSMUST00000181020 3802 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Trim40Q3UWA4 Olfr588-ps1-201ENSMUST00000118682 4607 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Trim40Q3UWA4 Emcn-201ENSMUST00000119475 1357 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
Trim40Q3UWA4 1700017N19Rik-203ENSMUST00000187119 1524 ntTSL 5 BASIC4.43□□□□□ -1.7
Trim40Q3UWA4 Dync2h1-204ENSMUST00000140466 14264 ntAPPRIS P2 TSL 5 BASIC4.43□□□□□ -1.7
Trim40Q3UWA4 Igkv4-78-201ENSMUST00000103343 358 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Trim40Q3UWA4 4930404H24Rik-201ENSMUST00000109783 331 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Trim40Q3UWA4 BC117090-201ENSMUST00000114850 387 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Trim40Q3UWA4 Gm11905-201ENSMUST00000117653 678 ntBASIC4.43□□□□□ -1.7
Trim40Q3UWA4 Gm14229-201ENSMUST00000121178 850 ntBASIC4.43□□□□□ -1.7
Trim40Q3UWA4 Gm12444-201ENSMUST00000121512 877 ntBASIC4.43□□□□□ -1.7
Trim40Q3UWA4 4930405D11Rik-201ENSMUST00000132218 568 ntTSL 3 BASIC4.43□□□□□ -1.7
Trim40Q3UWA4 4933417A18Rik-201ENSMUST00000160279 1045 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Trim40Q3UWA4 Gm42936-201ENSMUST00000174019 652 ntTSL 3 BASIC4.43□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 74.3 ms