Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Cyp2j12-201ENSMUST00000097972 1675 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Upf3aQ3ULJ3 Axdnd1-211ENSMUST00000213088 3561 ntAPPRIS P2 TSL 5 BASIC4.93□□□□□ -1.62
Upf3aQ3ULJ3 E330016L19Rik-201ENSMUST00000140614 1959 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Upf3aQ3ULJ3 Zscan4-ps3-201ENSMUST00000210559 2277 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Upf3aQ3ULJ3 4932438A13Rik-217ENSMUST00000152564 15541 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Upf3aQ3ULJ3 Olfr1191-ps1-201ENSMUST00000120598 4677 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Upf3aQ3ULJ3 Macf1-205ENSMUST00000106220 17608 ntTSL 5 BASIC4.93□□□□□ -1.62
Upf3aQ3ULJ3 Igkv1-135-201ENSMUST00000103303 394 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Upf3aQ3ULJ3 Gm23709-201ENSMUST00000104364 130 ntBASIC4.93□□□□□ -1.62
Upf3aQ3ULJ3 Gm12245-201ENSMUST00000117266 357 ntBASIC4.93□□□□□ -1.62
Upf3aQ3ULJ3 Gm14750-201ENSMUST00000118262 516 ntBASIC4.93□□□□□ -1.62
Upf3aQ3ULJ3 Cyp2j7-ps2-201ENSMUST00000119189 179 ntBASIC4.93□□□□□ -1.62
Upf3aQ3ULJ3 Gm6062-201ENSMUST00000120462 631 ntBASIC4.93□□□□□ -1.62
Upf3aQ3ULJ3 Gm12731-201ENSMUST00000120932 268 ntBASIC4.93□□□□□ -1.62
Upf3aQ3ULJ3 2610024D14Rik-201ENSMUST00000121233 294 ntBASIC4.93□□□□□ -1.62
Upf3aQ3ULJ3 Pdcl2-202ENSMUST00000122213 1049 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Upf3aQ3ULJ3 Vmn1r167-201ENSMUST00000164527 948 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Upf3aQ3ULJ3 Gm18828-202ENSMUST00000181035 310 ntBASIC4.93□□□□□ -1.62
Upf3aQ3ULJ3 A930005H10Rik-202ENSMUST00000185424 433 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Upf3aQ3ULJ3 Gm28975-201ENSMUST00000186412 686 ntBASIC4.93□□□□□ -1.62
Upf3aQ3ULJ3 Gm28721-201ENSMUST00000187649 918 ntTSL 3 BASIC4.93□□□□□ -1.62
Upf3aQ3ULJ3 Gm38180-201ENSMUST00000192381 395 ntTSL 5 BASIC4.93□□□□□ -1.62
Upf3aQ3ULJ3 Gm42564-201ENSMUST00000196013 582 ntTSL 5 BASIC4.93□□□□□ -1.62
Upf3aQ3ULJ3 Gm43370-201ENSMUST00000196437 284 ntBASIC4.93□□□□□ -1.62
Upf3aQ3ULJ3 4922502N22Rik-201ENSMUST00000204038 1149 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Upf3aQ3ULJ3 Olfr442-ps1-201ENSMUST00000204261 316 ntBASIC4.93□□□□□ -1.62
Upf3aQ3ULJ3 Snhg1-207ENSMUST00000205909 709 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Upf3aQ3ULJ3 AC102847.2-201ENSMUST00000227799 2906 ntBASIC4.93□□□□□ -1.62
Upf3aQ3ULJ3 Kcnh8-201ENSMUST00000039366 4287 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Upf3aQ3ULJ3 Fat1-206ENSMUST00000215588 13938 ntTSL 5 BASIC4.93□□□□□ -1.62
Upf3aQ3ULJ3 Rif1-201ENSMUST00000112693 8509 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Upf3aQ3ULJ3 Gm8989-201ENSMUST00000184782 7275 ntBASIC4.93□□□□□ -1.62
Upf3aQ3ULJ3 Olfr963-202ENSMUST00000215649 2203 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Upf3aQ3ULJ3 Olfr907-203ENSMUST00000214264 1910 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Upf3aQ3ULJ3 Akr1c14-201ENSMUST00000041768 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Upf3aQ3ULJ3 Olfr893-202ENSMUST00000211975 2924 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
Upf3aQ3ULJ3 Olfr944-203ENSMUST00000215306 1523 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Upf3aQ3ULJ3 Gm33609-201ENSMUST00000198559 2694 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Upf3aQ3ULJ3 Vmn2r117-201ENSMUST00000171996 2574 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Upf3aQ3ULJ3 Adgrg2-201ENSMUST00000112398 3418 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
Upf3aQ3ULJ3 Gm23178-201ENSMUST00000116782 95 ntBASIC4.92□□□□□ -1.62
Upf3aQ3ULJ3 Gm23318-201ENSMUST00000158000 108 ntBASIC4.92□□□□□ -1.62
Upf3aQ3ULJ3 Vmn1r-ps28-201ENSMUST00000174767 942 ntBASIC4.92□□□□□ -1.62
Upf3aQ3ULJ3 Gm27165-201ENSMUST00000183951 232 ntBASIC4.92□□□□□ -1.62
Upf3aQ3ULJ3 Gm29228-201ENSMUST00000185489 418 ntBASIC4.92□□□□□ -1.62
Upf3aQ3ULJ3 Gm28935-201ENSMUST00000185737 568 ntTSL 2 BASIC4.92□□□□□ -1.62
Upf3aQ3ULJ3 Gm3145-201ENSMUST00000188584 220 ntBASIC4.92□□□□□ -1.62
Upf3aQ3ULJ3 Gm42948-201ENSMUST00000199085 578 ntTSL 5 BASIC4.92□□□□□ -1.62
Upf3aQ3ULJ3 Gm44852-201ENSMUST00000207950 369 ntBASIC4.92□□□□□ -1.62
Upf3aQ3ULJ3 Gm18462-201ENSMUST00000208112 417 ntBASIC4.92□□□□□ -1.62
Upf3aQ3ULJ3 Gm38944-201ENSMUST00000208218 512 ntTSL 2 BASIC4.92□□□□□ -1.62
Upf3aQ3ULJ3 Gm30954-201ENSMUST00000208715 1210 ntTSL 5 BASIC4.92□□□□□ -1.62
Upf3aQ3ULJ3 Gm45499-201ENSMUST00000211656 280 ntBASIC4.92□□□□□ -1.62
Upf3aQ3ULJ3 Ifngas1-201ENSMUST00000220034 1121 ntTSL 2 BASIC4.92□□□□□ -1.62
Upf3aQ3ULJ3 Ear-ps9-202ENSMUST00000226796 245 ntBASIC4.92□□□□□ -1.62
Upf3aQ3ULJ3 AC074315.1-201ENSMUST00000228801 214 ntBASIC4.92□□□□□ -1.62
Upf3aQ3ULJ3 Olfr437-201ENSMUST00000060243 1018 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Upf3aQ3ULJ3 Ear6-201ENSMUST00000074477 713 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Upf3aQ3ULJ3 Vmn1r84-201ENSMUST00000086228 2452 ntAPPRIS P2 BASIC4.92□□□□□ -1.62
Upf3aQ3ULJ3 Fbxw24-201ENSMUST00000073962 1488 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Upf3aQ3ULJ3 Vmn1r197-203ENSMUST00000227017 5158 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Upf3aQ3ULJ3 Olfr1195-202ENSMUST00000213545 2585 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Upf3aQ3ULJ3 Piga-201ENSMUST00000033754 3594 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Upf3aQ3ULJ3 Gm16579-201ENSMUST00000161985 2566 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Upf3aQ3ULJ3 Vmn2r100-201ENSMUST00000166081 2553 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Upf3aQ3ULJ3 Gm37114-201ENSMUST00000195065 1804 ntBASIC4.91□□□□□ -1.62
Upf3aQ3ULJ3 Nxt2-201ENSMUST00000042329 2447 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
Upf3aQ3ULJ3 Olfr273-202ENSMUST00000107670 4796 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Upf3aQ3ULJ3 Ifit2-201ENSMUST00000102826 3818 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Upf3aQ3ULJ3 Lrrc51-207ENSMUST00000106967 675 ntTSL 3 BASIC4.91□□□□□ -1.62
Upf3aQ3ULJ3 Olfr1035-ps1-201ENSMUST00000120109 966 ntBASIC4.91□□□□□ -1.62
Upf3aQ3ULJ3 Gm4912-201ENSMUST00000122212 1044 ntBASIC4.91□□□□□ -1.62
Upf3aQ3ULJ3 2210408F21Rik-202ENSMUST00000124811 384 ntTSL 2 BASIC4.91□□□□□ -1.62
Upf3aQ3ULJ3 Gm12735-201ENSMUST00000146218 651 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Upf3aQ3ULJ3 Gm10662-201ENSMUST00000168053 942 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Upf3aQ3ULJ3 Gm17133-201ENSMUST00000170636 289 ntTSL 3 BASIC4.91□□□□□ -1.62
Upf3aQ3ULJ3 Gm22243-201ENSMUST00000178754 120 ntBASIC4.91□□□□□ -1.62
Upf3aQ3ULJ3 Gm5891-201ENSMUST00000179493 942 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Upf3aQ3ULJ3 Gm28660-201ENSMUST00000186496 253 ntBASIC4.91□□□□□ -1.62
Upf3aQ3ULJ3 Gm28786-201ENSMUST00000187228 172 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Upf3aQ3ULJ3 Gm8874-201ENSMUST00000196826 286 ntBASIC4.91□□□□□ -1.62
Upf3aQ3ULJ3 Csn2-204ENSMUST00000196869 879 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
Upf3aQ3ULJ3 Gm42999-201ENSMUST00000198049 786 ntBASIC4.91□□□□□ -1.62
Upf3aQ3ULJ3 Csn2-208ENSMUST00000198057 827 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
Upf3aQ3ULJ3 Gm43441-201ENSMUST00000201458 205 ntBASIC4.91□□□□□ -1.62
Upf3aQ3ULJ3 Klk1b23-ps-201ENSMUST00000206347 345 ntBASIC4.91□□□□□ -1.62
Upf3aQ3ULJ3 Gm39302-201ENSMUST00000215184 636 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Upf3aQ3ULJ3 AC129323.1-201ENSMUST00000216733 470 ntBASIC4.91□□□□□ -1.62
Upf3aQ3ULJ3 AC154305.1-201ENSMUST00000224443 450 ntBASIC4.91□□□□□ -1.62
Upf3aQ3ULJ3 AC129935.1-201ENSMUST00000226302 873 ntBASIC4.91□□□□□ -1.62
Upf3aQ3ULJ3 Tas2r109-201ENSMUST00000067539 951 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Upf3aQ3ULJ3 n-R5s168-201ENSMUST00000083948 104 ntBASIC4.91□□□□□ -1.62
Upf3aQ3ULJ3 Gm10491-201ENSMUST00000085330 117 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Upf3aQ3ULJ3 Olfr876-201ENSMUST00000086064 1048 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Upf3aQ3ULJ3 1700017N19Rik-201ENSMUST00000041162 1691 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Upf3aQ3ULJ3 Zfp758-203ENSMUST00000121315 2860 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
Upf3aQ3ULJ3 Slco1b2-201ENSMUST00000042812 3307 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
Upf3aQ3ULJ3 Slco6d1-201ENSMUST00000027575 2328 ntAPPRIS P4 TSL 1 (best) BASIC4.91□□□□□ -1.62
Upf3aQ3ULJ3 Gm11867-201ENSMUST00000133363 1909 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Upf3aQ3ULJ3 4930528J11Rik-201ENSMUST00000201689 3611 ntBASIC4.91□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms