Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm20619-204ENSMUST00000181343 786 ntTSL 5 BASIC5.11□□□□□ -1.59
Col8a1Q00780 Rian-203ENSMUST00000181527 989 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Col8a1Q00780 Rian-211ENSMUST00000182737 699 ntTSL 3 BASIC5.11□□□□□ -1.59
Col8a1Q00780 Mir6411-201ENSMUST00000183556 108 ntBASIC5.11□□□□□ -1.59
Col8a1Q00780 Mir7031-201ENSMUST00000183860 65 ntBASIC5.11□□□□□ -1.59
Col8a1Q00780 1700027A15Rik-201ENSMUST00000185768 321 ntTSL 5 BASIC5.11□□□□□ -1.59
Col8a1Q00780 Gm28418-201ENSMUST00000186179 423 ntBASIC5.11□□□□□ -1.59
Col8a1Q00780 Gm17847-201ENSMUST00000188261 1127 ntBASIC5.11□□□□□ -1.59
Col8a1Q00780 Gm28643-201ENSMUST00000188811 356 ntTSL 5 BASIC5.11□□□□□ -1.59
Col8a1Q00780 Olfr712-ps1-201ENSMUST00000207690 950 ntBASIC5.11□□□□□ -1.59
Col8a1Q00780 Gm29154-234ENSMUST00000215272 750 ntTSL 5 BASIC5.11□□□□□ -1.59
Col8a1Q00780 AC140930.4-201ENSMUST00000220750 150 ntBASIC5.11□□□□□ -1.59
Col8a1Q00780 1700024I08Rik-203ENSMUST00000222372 754 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Col8a1Q00780 AL807824.1-201ENSMUST00000223151 183 ntBASIC5.11□□□□□ -1.59
Col8a1Q00780 CT025552.2-201ENSMUST00000225497 317 ntBASIC5.11□□□□□ -1.59
Col8a1Q00780 AC192088.3-201ENSMUST00000227858 831 ntBASIC5.11□□□□□ -1.59
Col8a1Q00780 AC109172.2-201ENSMUST00000228792 381 ntBASIC5.11□□□□□ -1.59
Col8a1Q00780 AC168062.2-201ENSMUST00000228907 422 ntBASIC5.11□□□□□ -1.59
Col8a1Q00780 Olfr1206-201ENSMUST00000077302 924 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Col8a1Q00780 Olfr57-201ENSMUST00000082244 1080 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Col8a1Q00780 n-R5s161-201ENSMUST00000083728 114 ntBASIC5.11□□□□□ -1.59
Col8a1Q00780 Gm45762-201ENSMUST00000212863 2619 ntBASIC5.11□□□□□ -1.59
Col8a1Q00780 AC133498.1-201ENSMUST00000222871 2925 ntTSL 5 BASIC5.11□□□□□ -1.59
Col8a1Q00780 Gm21750-201ENSMUST00000098874 1497 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Col8a1Q00780 Pcdh11x-203ENSMUST00000113364 4454 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
Col8a1Q00780 1700017N19Rik-203ENSMUST00000187119 1524 ntTSL 5 BASIC5.11□□□□□ -1.59
Col8a1Q00780 AC167192.3-201ENSMUST00000224096 1567 ntBASIC5.11□□□□□ -1.59
Col8a1Q00780 Gm8267-203ENSMUST00000226900 1592 ntAPPRIS ALT2 BASIC5.11□□□□□ -1.59
Col8a1Q00780 Ints6l-202ENSMUST00000101553 3201 ntTSL 2 BASIC5.11□□□□□ -1.59
Col8a1Q00780 Vrk2-202ENSMUST00000109504 1642 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Col8a1Q00780 Ube4a-202ENSMUST00000117549 3415 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Col8a1Q00780 Gm45297-201ENSMUST00000209893 3483 ntBASIC5.11□□□□□ -1.59
Col8a1Q00780 Cdh9-202ENSMUST00000228307 3539 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Col8a1Q00780 Gm5662-201ENSMUST00000101168 1840 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Col8a1Q00780 Ugt2b38-201ENSMUST00000072818 1891 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Col8a1Q00780 AC140299.2-201ENSMUST00000219546 1969 ntBASIC5.11□□□□□ -1.59
Col8a1Q00780 Tcf7l2-202ENSMUST00000061496 4053 ntAPPRIS P3 TSL 5 BASIC5.11□□□□□ -1.59
Col8a1Q00780 Alkbh8-202ENSMUST00000165105 2256 ntAPPRIS P2 TSL 5 BASIC5.11□□□□□ -1.59
Col8a1Q00780 4930568G15Rik-201ENSMUST00000193317 3218 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Col8a1Q00780 4932435O22Rik-202ENSMUST00000148405 3406 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Col8a1Q00780 Nt5c3-202ENSMUST00000101367 1519 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Col8a1Q00780 Gm25758-201ENSMUST00000103987 129 ntBASIC5.1□□□□□ -1.59
Col8a1Q00780 Piga-202ENSMUST00000112255 3597 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Col8a1Q00780 Gm4758-201ENSMUST00000114851 291 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Col8a1Q00780 Gm14510-201ENSMUST00000116165 1092 ntBASIC5.1□□□□□ -1.59
Col8a1Q00780 Gm12937-201ENSMUST00000118333 448 ntBASIC5.1□□□□□ -1.59
Col8a1Q00780 Gm15791-201ENSMUST00000120365 319 ntBASIC5.1□□□□□ -1.59
Col8a1Q00780 Gm11498-201ENSMUST00000120660 949 ntBASIC5.1□□□□□ -1.59
Col8a1Q00780 Gm12900-201ENSMUST00000120919 573 ntBASIC5.1□□□□□ -1.59
Col8a1Q00780 Gm12007-201ENSMUST00000120978 597 ntBASIC5.1□□□□□ -1.59
Col8a1Q00780 Gm13531-201ENSMUST00000121893 543 ntBASIC5.1□□□□□ -1.59
Col8a1Q00780 Rpl30-206ENSMUST00000142643 505 ntTSL 2 BASIC5.1□□□□□ -1.59
Col8a1Q00780 Gm14216-202ENSMUST00000155334 492 ntTSL 2 BASIC5.1□□□□□ -1.59
Col8a1Q00780 Gm25962-201ENSMUST00000157173 168 ntBASIC5.1□□□□□ -1.59
Col8a1Q00780 Gm23824-201ENSMUST00000158741 276 ntBASIC5.1□□□□□ -1.59
Col8a1Q00780 Gm24735-201ENSMUST00000158859 118 ntBASIC5.1□□□□□ -1.59
Col8a1Q00780 Gm16311-201ENSMUST00000161939 702 ntTSL 3 BASIC5.1□□□□□ -1.59
Col8a1Q00780 Shoc2-202ENSMUST00000169861 4065 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Col8a1Q00780 Gm17160-201ENSMUST00000170645 260 ntTSL 3 BASIC5.1□□□□□ -1.59
Col8a1Q00780 Naa60-211ENSMUST00000176625 876 ntTSL 2 BASIC5.1□□□□□ -1.59
Col8a1Q00780 Gm6900-201ENSMUST00000178971 342 ntBASIC5.1□□□□□ -1.59
Col8a1Q00780 9330182O14Rik-201ENSMUST00000179120 423 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Col8a1Q00780 Gm26740-202ENSMUST00000181532 1531 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Col8a1Q00780 Gm26962-201ENSMUST00000182545 265 ntTSL 3 BASIC5.1□□□□□ -1.59
Col8a1Q00780 Gm28016-201ENSMUST00000184594 196 ntBASIC5.1□□□□□ -1.59
Col8a1Q00780 Mir7687-201ENSMUST00000184722 59 ntBASIC5.1□□□□□ -1.59
Col8a1Q00780 Gm5590-202ENSMUST00000186976 2315 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Col8a1Q00780 Gm28191-201ENSMUST00000189112 211 ntBASIC5.1□□□□□ -1.59
Col8a1Q00780 Gm19280-201ENSMUST00000190191 205 ntBASIC5.1□□□□□ -1.59
Col8a1Q00780 Gm28188-201ENSMUST00000190483 236 ntBASIC5.1□□□□□ -1.59
Col8a1Q00780 1700031M16Rik-207ENSMUST00000191513 847 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
Col8a1Q00780 Gm19585-202ENSMUST00000191539 327 ntTSL 3 BASIC5.1□□□□□ -1.59
Col8a1Q00780 A430027C01Rik-201ENSMUST00000194599 1644 ntBASIC5.1□□□□□ -1.59
Col8a1Q00780 Gm18036-201ENSMUST00000195256 272 ntBASIC5.1□□□□□ -1.59
Col8a1Q00780 Gm43369-201ENSMUST00000196373 1552 ntBASIC5.1□□□□□ -1.59
Col8a1Q00780 Gm42465-201ENSMUST00000197036 492 ntBASIC5.1□□□□□ -1.59
Col8a1Q00780 1700013M08Rik-201ENSMUST00000197709 683 ntTSL 3 BASIC5.1□□□□□ -1.59
Col8a1Q00780 Gm42999-201ENSMUST00000198049 786 ntBASIC5.1□□□□□ -1.59
Col8a1Q00780 Gm30784-201ENSMUST00000204491 794 ntTSL 2 BASIC5.1□□□□□ -1.59
Col8a1Q00780 Gm45249-201ENSMUST00000211021 348 ntBASIC5.1□□□□□ -1.59
Col8a1Q00780 Olfr1179-202ENSMUST00000213157 1309 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Col8a1Q00780 Gm46193-201ENSMUST00000219399 364 ntBASIC5.1□□□□□ -1.59
Col8a1Q00780 AC104832.1-201ENSMUST00000222938 550 ntBASIC5.1□□□□□ -1.59
Col8a1Q00780 Nmur2-201ENSMUST00000037682 3302 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Col8a1Q00780 Gm5229-201ENSMUST00000039375 354 ntBASIC5.1□□□□□ -1.59
Col8a1Q00780 2700049A03Rik-201ENSMUST00000045907 4507 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
Col8a1Q00780 Olfr134-201ENSMUST00000074883 939 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Col8a1Q00780 Klk1b9-201ENSMUST00000081399 870 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Col8a1Q00780 Gm23238-201ENSMUST00000083007 164 ntBASIC5.1□□□□□ -1.59
Col8a1Q00780 Gm22364-201ENSMUST00000083097 98 ntBASIC5.1□□□□□ -1.59
Col8a1Q00780 Gm18852-201ENSMUST00000184149 3593 ntBASIC5.1□□□□□ -1.59
Col8a1Q00780 Gm42607-201ENSMUST00000200221 3393 ntBASIC5.1□□□□□ -1.59
Col8a1Q00780 Rsf1os2-202ENSMUST00000147690 3091 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Col8a1Q00780 Eps15-207ENSMUST00000175776 2802 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
Col8a1Q00780 Gm14886-201ENSMUST00000117208 2629 ntBASIC5.1□□□□□ -1.59
Col8a1Q00780 Dlx6os1-201ENSMUST00000159568 4608 ntTSL 5 BASIC5.09□□□□□ -1.59
Col8a1Q00780 Sytl5-202ENSMUST00000086165 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
Col8a1Q00780 Gm43611-201ENSMUST00000196656 4352 ntBASIC5.09□□□□□ -1.59
Col8a1Q00780 Rabgap1-202ENSMUST00000066055 4247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
Col8a1Q00780 Gm19335-201ENSMUST00000195836 2069 ntBASIC5.09□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 75.1 ms