Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 1810065E05Rik-201ENSMUST00000013797 926 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Hmgb1P63158 1700057H21Rik-201ENSMUST00000152467 383 ntTSL 5 BASIC6.05□□□□□ -1.44
Hmgb1P63158 Gm26045-201ENSMUST00000157862 97 ntBASIC6.05□□□□□ -1.44
Hmgb1P63158 Gm8837-201ENSMUST00000161037 1107 ntBASIC6.05□□□□□ -1.44
Hmgb1P63158 Gm6632-201ENSMUST00000168425 954 ntBASIC6.05□□□□□ -1.44
Hmgb1P63158 9430065F17Rik-202ENSMUST00000180908 1084 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Hmgb1P63158 Rian-217ENSMUST00000183266 687 ntTSL 3 BASIC6.05□□□□□ -1.44
Hmgb1P63158 1700022E09Rik-201ENSMUST00000185295 299 ntTSL 5 BASIC6.05□□□□□ -1.44
Hmgb1P63158 Gm29289-201ENSMUST00000188358 576 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Hmgb1P63158 2310020H05Rik-201ENSMUST00000189489 720 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Hmgb1P63158 Gm43675-201ENSMUST00000199468 1184 ntBASIC6.05□□□□□ -1.44
Hmgb1P63158 Gm42896-201ENSMUST00000201249 1113 ntBASIC6.05□□□□□ -1.44
Hmgb1P63158 4930443G03Rik-201ENSMUST00000203475 1282 ntBASIC6.05□□□□□ -1.44
Hmgb1P63158 4930505K13Rik-201ENSMUST00000208641 546 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Hmgb1P63158 Olfr1464-ps1-201ENSMUST00000208760 923 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Hmgb1P63158 Gm7706-202ENSMUST00000211278 590 ntTSL 3 BASIC6.05□□□□□ -1.44
Hmgb1P63158 Gm34096-201ENSMUST00000211296 530 ntTSL 3 BASIC6.05□□□□□ -1.44
Hmgb1P63158 CU024910.1-201ENSMUST00000214310 418 ntBASIC6.05□□□□□ -1.44
Hmgb1P63158 AC117797.1-201ENSMUST00000223977 695 ntBASIC6.05□□□□□ -1.44
Hmgb1P63158 AC117656.3-204ENSMUST00000225656 859 ntBASIC6.05□□□□□ -1.44
Hmgb1P63158 AC134335.1-201ENSMUST00000227626 329 ntBASIC6.05□□□□□ -1.44
Hmgb1P63158 Olfr1369-ps1-201ENSMUST00000079050 954 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Hmgb1P63158 Boll-201ENSMUST00000087585 882 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Hmgb1P63158 Olfr570-201ENSMUST00000098215 1045 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Hmgb1P63158 Gm37509-201ENSMUST00000194867 3169 ntBASIC6.05□□□□□ -1.44
Hmgb1P63158 Ctsm-202ENSMUST00000223778 1905 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Hmgb1P63158 Serpina3b-201ENSMUST00000085052 2070 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Hmgb1P63158 Gm43508-201ENSMUST00000197251 3783 ntBASIC6.05□□□□□ -1.44
Hmgb1P63158 Olfr1286-203ENSMUST00000213210 3740 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Hmgb1P63158 Olfr430-202ENSMUST00000213425 3873 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Hmgb1P63158 Cdk14-201ENSMUST00000030763 4851 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
Hmgb1P63158 Smc2-202ENSMUST00000117280 5328 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Hmgb1P63158 Olfr459-203ENSMUST00000214976 3770 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
Hmgb1P63158 Gm35256-201ENSMUST00000212780 3269 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Hmgb1P63158 Chrna6-201ENSMUST00000033882 2906 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Hmgb1P63158 Gm8402-201ENSMUST00000118183 1770 ntBASIC6.04□□□□□ -1.44
Hmgb1P63158 Gm8383-201ENSMUST00000121179 1770 ntBASIC6.04□□□□□ -1.44
Hmgb1P63158 Gm12495-201ENSMUST00000119750 447 ntBASIC6.04□□□□□ -1.44
Hmgb1P63158 Rpl26-ps5-201ENSMUST00000122220 439 ntBASIC6.04□□□□□ -1.44
Hmgb1P63158 Gm14905-201ENSMUST00000122351 639 ntBASIC6.04□□□□□ -1.44
Hmgb1P63158 Gm24537-201ENSMUST00000157950 102 ntBASIC6.04□□□□□ -1.44
Hmgb1P63158 Gm15790-201ENSMUST00000161109 1251 ntBASIC6.04□□□□□ -1.44
Hmgb1P63158 Gm17555-201ENSMUST00000164042 1113 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Hmgb1P63158 Olfr325-201ENSMUST00000169428 1065 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Hmgb1P63158 Vmn1r-ps57-201ENSMUST00000174879 288 ntBASIC6.04□□□□□ -1.44
Hmgb1P63158 Gm24080-201ENSMUST00000175178 232 ntBASIC6.04□□□□□ -1.44
Hmgb1P63158 1110046J04Rik-203ENSMUST00000181800 777 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Hmgb1P63158 Il19-203ENSMUST00000187410 1135 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Hmgb1P63158 Olfr1225-201ENSMUST00000188861 1027 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Hmgb1P63158 Gm29467-202ENSMUST00000189669 935 ntTSL 5 BASIC6.04□□□□□ -1.44
Hmgb1P63158 Gm29633-207ENSMUST00000190523 737 ntTSL 5 BASIC6.04□□□□□ -1.44
Hmgb1P63158 Gm8823-201ENSMUST00000193158 433 ntBASIC6.04□□□□□ -1.44
Hmgb1P63158 Gm9632-201ENSMUST00000195934 643 ntBASIC6.04□□□□□ -1.44
Hmgb1P63158 Mir6516-201ENSMUST00000196236 110 ntBASIC6.04□□□□□ -1.44
Hmgb1P63158 Gm3970-201ENSMUST00000198001 334 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Hmgb1P63158 Gm44348-201ENSMUST00000200165 122 ntBASIC6.04□□□□□ -1.44
Hmgb1P63158 Gm18861-201ENSMUST00000202509 1186 ntBASIC6.04□□□□□ -1.44
Hmgb1P63158 AC153505.2-201ENSMUST00000217741 277 ntBASIC6.04□□□□□ -1.44
Hmgb1P63158 AC166263.1-201ENSMUST00000218586 238 ntBASIC6.04□□□□□ -1.44
Hmgb1P63158 Gm36607-201ENSMUST00000222750 1087 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Hmgb1P63158 Prl8a8-204ENSMUST00000224072 1128 ntAPPRIS ALT2 BASIC6.04□□□□□ -1.44
Hmgb1P63158 AC239878.1-201ENSMUST00000224212 506 ntBASIC6.04□□□□□ -1.44
Hmgb1P63158 Zfp429-203ENSMUST00000224684 524 ntBASIC6.04□□□□□ -1.44
Hmgb1P63158 AC113031.2-201ENSMUST00000226132 579 ntBASIC6.04□□□□□ -1.44
Hmgb1P63158 AC121960.3-201ENSMUST00000227077 623 ntBASIC6.04□□□□□ -1.44
Hmgb1P63158 Olfr1302-201ENSMUST00000054004 948 ntAPPRIS P2 BASIC6.04□□□□□ -1.44
Hmgb1P63158 Wfdc15a-201ENSMUST00000063251 488 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Hmgb1P63158 Gm5142-201ENSMUST00000066558 626 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Hmgb1P63158 Clk4-202ENSMUST00000109111 1427 ntTSL 2 BASIC6.04□□□□□ -1.44
Hmgb1P63158 AC116726.1-201ENSMUST00000215028 3497 ntBASIC6.04□□□□□ -1.44
Hmgb1P63158 Olfr822-202ENSMUST00000216879 2663 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Hmgb1P63158 A730004F24Rik-202ENSMUST00000195454 1704 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Hmgb1P63158 Gm26514-201ENSMUST00000181087 4231 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Hmgb1P63158 BC051142-201ENSMUST00000078615 1899 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
Hmgb1P63158 Gm5591-201ENSMUST00000079759 3441 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Hmgb1P63158 Pou2f1-208ENSMUST00000160260 13022 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Hmgb1P63158 Zfp788-201ENSMUST00000045720 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Hmgb1P63158 Olfr303-205ENSMUST00000216409 4106 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Hmgb1P63158 Ube2u-202ENSMUST00000133493 1537 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Hmgb1P63158 Olfr1357-202ENSMUST00000203305 2286 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Hmgb1P63158 Gm37400-201ENSMUST00000193148 3605 ntBASIC6.04□□□□□ -1.44
Hmgb1P63158 AC115289.2-201ENSMUST00000223836 2803 ntBASIC6.03□□□□□ -1.44
Hmgb1P63158 Gm44000-201ENSMUST00000205038 1478 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Hmgb1P63158 AC158115.2-201ENSMUST00000221804 5563 ntTSL 5 BASIC6.03□□□□□ -1.44
Hmgb1P63158 Vmn2r5-201ENSMUST00000170270 2484 ntAPPRIS P2 TSL 5 BASIC6.03□□□□□ -1.44
Hmgb1P63158 Olfr64-201ENSMUST00000081748 5001 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Hmgb1P63158 Olfr895-202ENSMUST00000212156 1558 ntAPPRIS P1 TSL 3 BASIC6.03□□□□□ -1.44
Hmgb1P63158 Pum2-201ENSMUST00000020915 3587 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Hmgb1P63158 Ear-ps2-201ENSMUST00000100689 466 ntBASIC6.03□□□□□ -1.44
Hmgb1P63158 Gm15402-201ENSMUST00000114051 670 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Hmgb1P63158 Zcchc9-ps-201ENSMUST00000117884 786 ntBASIC6.03□□□□□ -1.44
Hmgb1P63158 Gm5381-201ENSMUST00000117975 1250 ntBASIC6.03□□□□□ -1.44
Hmgb1P63158 Gm15090-201ENSMUST00000118787 1196 ntBASIC6.03□□□□□ -1.44
Hmgb1P63158 Gm14607-201ENSMUST00000119119 491 ntBASIC6.03□□□□□ -1.44
Hmgb1P63158 Zbtb8os-202ENSMUST00000119480 527 ntTSL 5 BASIC6.03□□□□□ -1.44
Hmgb1P63158 Gm15926-201ENSMUST00000120492 550 ntBASIC6.03□□□□□ -1.44
Hmgb1P63158 Olfr336-ps1-201ENSMUST00000120897 940 ntBASIC6.03□□□□□ -1.44
Hmgb1P63158 Gm12978-201ENSMUST00000121250 522 ntBASIC6.03□□□□□ -1.44
Hmgb1P63158 Gm15089-201ENSMUST00000122332 1196 ntBASIC6.03□□□□□ -1.44
Hmgb1P63158 Gm22959-201ENSMUST00000122514 303 ntBASIC6.03□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 76.1 ms