Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Gm28168-201ENSMUST00000191265 2630 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Cux1P53564 Crebrf-201ENSMUST00000062519 7462 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Cux1P53564 Gm4070-202ENSMUST00000176467 9007 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Cux1P53564 Gm37902-201ENSMUST00000192839 1683 ntBASIC6.87□□□□□ -1.31
Cux1P53564 B230206I08Rik-201ENSMUST00000207479 3191 ntBASIC6.87□□□□□ -1.31
Cux1P53564 Ubr4-212ENSMUST00000165860 15798 ntTSL 5 BASIC6.87□□□□□ -1.31
Cux1P53564 Pcdh15-203ENSMUST00000105424 6932 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
Cux1P53564 Olfr535-203ENSMUST00000213715 5033 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
Cux1P53564 Igkv12-98-201ENSMUST00000103327 344 ntAPPRIS ALT2 BASIC6.86□□□□□ -1.31
Cux1P53564 Gm23228-201ENSMUST00000157296 270 ntBASIC6.86□□□□□ -1.31
Cux1P53564 Gm24905-201ENSMUST00000158129 104 ntBASIC6.86□□□□□ -1.31
Cux1P53564 Vmn2r-ps10-201ENSMUST00000176836 898 ntBASIC6.86□□□□□ -1.31
Cux1P53564 Vmn2r-ps8-201ENSMUST00000177088 898 ntBASIC6.86□□□□□ -1.31
Cux1P53564 Gm37272-201ENSMUST00000193401 488 ntBASIC6.86□□□□□ -1.31
Cux1P53564 Gm36971-201ENSMUST00000195244 378 ntTSL 5 BASIC6.86□□□□□ -1.31
Cux1P53564 Gm37134-201ENSMUST00000195810 628 ntTSL 3 BASIC6.86□□□□□ -1.31
Cux1P53564 Gm42579-201ENSMUST00000200512 734 ntBASIC6.86□□□□□ -1.31
Cux1P53564 AC163354.1-203ENSMUST00000222356 643 ntTSL 5 BASIC6.86□□□□□ -1.31
Cux1P53564 Olfr1277-201ENSMUST00000099619 962 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
Cux1P53564 Cybb-201ENSMUST00000015484 4752 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Cux1P53564 Ifi44-201ENSMUST00000029671 2910 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Cux1P53564 Hgf-204ENSMUST00000199581 3468 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Cux1P53564 Dmxl2-202ENSMUST00000118600 9465 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
Cux1P53564 Gm37332-201ENSMUST00000195853 2844 ntBASIC6.86□□□□□ -1.31
Cux1P53564 Fam26d-201ENSMUST00000048052 3711 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Cux1P53564 AC129085.3-201ENSMUST00000225686 1705 ntBASIC6.86□□□□□ -1.31
Cux1P53564 Vmn1r173-203ENSMUST00000227987 9233 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
Cux1P53564 Adam7-201ENSMUST00000022640 3469 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Cux1P53564 Gm24788-201ENSMUST00000104283 156 ntBASIC6.86□□□□□ -1.31
Cux1P53564 Gm12062-201ENSMUST00000117533 259 ntBASIC6.86□□□□□ -1.31
Cux1P53564 Ly6a-203ENSMUST00000187171 853 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Cux1P53564 Gm19774-201ENSMUST00000190667 114 ntBASIC6.86□□□□□ -1.31
Cux1P53564 Olfr1473-ps1-201ENSMUST00000207135 958 ntBASIC6.86□□□□□ -1.31
Cux1P53564 Prl3d3-202ENSMUST00000223958 675 ntAPPRIS ALT2 BASIC6.86□□□□□ -1.31
Cux1P53564 Fabp2-201ENSMUST00000023820 965 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Cux1P53564 Gm10042-201ENSMUST00000079884 78 ntBASIC6.86□□□□□ -1.31
Cux1P53564 Olfr806-201ENSMUST00000095245 942 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
Cux1P53564 Hspd1-ps2-201ENSMUST00000210003 1697 ntBASIC6.85□□□□□ -1.31
Cux1P53564 Slc22a22-201ENSMUST00000022995 2015 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Cux1P53564 Gm43374-201ENSMUST00000202498 2391 ntBASIC6.85□□□□□ -1.31
Cux1P53564 Cr2-208ENSMUST00000195120 6212 ntTSL 5 BASIC6.85□□□□□ -1.31
Cux1P53564 Prr11-201ENSMUST00000051395 3824 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Cux1P53564 Scaper-205ENSMUST00000217647 4370 ntAPPRIS P2 TSL 5 BASIC6.85□□□□□ -1.31
Cux1P53564 Kdm5d-201ENSMUST00000055032 7974 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Cux1P53564 Gm13985-201ENSMUST00000154409 621 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Cux1P53564 Gm26347-201ENSMUST00000157526 131 ntBASIC6.85□□□□□ -1.31
Cux1P53564 Gm16378-201ENSMUST00000179168 342 ntBASIC6.85□□□□□ -1.31
Cux1P53564 Il18-202ENSMUST00000180021 702 ntAPPRIS P2 TSL 1 (best) BASIC6.85□□□□□ -1.31
Cux1P53564 Gm42695-201ENSMUST00000199445 818 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Cux1P53564 AC155805.1-201ENSMUST00000222419 3808 ntBASIC6.85□□□□□ -1.31
Cux1P53564 Vmn1r28-203ENSMUST00000228678 909 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
Cux1P53564 AC154838.1-201ENSMUST00000228944 911 ntBASIC6.85□□□□□ -1.31
Cux1P53564 Gm7257-201ENSMUST00000041537 519 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Cux1P53564 Il18-201ENSMUST00000059081 702 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
Cux1P53564 n-R5s160-201ENSMUST00000083096 120 ntBASIC6.85□□□□□ -1.31
Cux1P53564 Vmn2r26-201ENSMUST00000032238 2568 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Cux1P53564 AC144772.3-201ENSMUST00000228829 3126 ntBASIC6.85□□□□□ -1.31
Cux1P53564 B130011K05Rik-201ENSMUST00000151765 3270 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Cux1P53564 Olfr1252-202ENSMUST00000213196 3331 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Cux1P53564 Olfr364-ps1-202ENSMUST00000214905 1914 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Cux1P53564 Pign-205ENSMUST00000186485 6759 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Cux1P53564 Ccnb3-202ENSMUST00000115752 4554 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Cux1P53564 AC116797.2-201ENSMUST00000224763 4221 ntBASIC6.84□□□□□ -1.31
Cux1P53564 Trav16d-dv11-201ENSMUST00000103606 353 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Cux1P53564 Gm15981-201ENSMUST00000119196 457 ntBASIC6.84□□□□□ -1.31
Cux1P53564 6030471H07Rik-201ENSMUST00000125884 492 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Cux1P53564 Spin2-ps4-201ENSMUST00000126395 762 ntBASIC6.84□□□□□ -1.31
Cux1P53564 Spin2-ps3-201ENSMUST00000148147 762 ntBASIC6.84□□□□□ -1.31
Cux1P53564 Gm26877-201ENSMUST00000180728 633 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Cux1P53564 Gm44261-201ENSMUST00000203337 209 ntBASIC6.84□□□□□ -1.31
Cux1P53564 Olfr1369-ps1-201ENSMUST00000079050 954 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Cux1P53564 Olfr740-201ENSMUST00000089838 936 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Cux1P53564 Olfr1216-201ENSMUST00000099800 936 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Cux1P53564 Olfr726-205ENSMUST00000215278 1324 ntAPPRIS P1 TSL 3 BASIC6.84□□□□□ -1.31
Cux1P53564 AC122263.1-201ENSMUST00000228636 2805 ntBASIC6.84□□□□□ -1.31
Cux1P53564 Gm43188-201ENSMUST00000200180 2160 ntBASIC6.84□□□□□ -1.31
Cux1P53564 Xpo7-202ENSMUST00000167242 15121 ntAPPRIS ALT1 TSL 5 BASIC6.84□□□□□ -1.32
Cux1P53564 Chek1-205ENSMUST00000173963 1509 ntTSL 5 BASIC6.84□□□□□ -1.32
Cux1P53564 Fat1-206ENSMUST00000215588 13938 ntTSL 5 BASIC6.84□□□□□ -1.32
Cux1P53564 Olfr308-202ENSMUST00000214977 4991 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.32
Cux1P53564 Gm32444-201ENSMUST00000195147 3511 ntBASIC6.83□□□□□ -1.32
Cux1P53564 Zfp101-204ENSMUST00000174512 3743 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Cux1P53564 Cast-208ENSMUST00000223033 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Cux1P53564 AI987944-202ENSMUST00000205338 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Cux1P53564 Gm42986-201ENSMUST00000201618 3385 ntBASIC6.83□□□□□ -1.32
Cux1P53564 Lrrc37a-201ENSMUST00000153273 9647 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Cux1P53564 Adgb-206ENSMUST00000208717 4902 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
Cux1P53564 Gm25290-201ENSMUST00000122796 144 ntBASIC6.83□□□□□ -1.32
Cux1P53564 Gm22588-201ENSMUST00000157510 140 ntBASIC6.83□□□□□ -1.32
Cux1P53564 Gm25386-201ENSMUST00000157814 288 ntBASIC6.83□□□□□ -1.32
Cux1P53564 Gm17109-201ENSMUST00000163985 358 ntBASIC6.83□□□□□ -1.32
Cux1P53564 1700027A15Rik-203ENSMUST00000188793 423 ntTSL 3 BASIC6.83□□□□□ -1.32
Cux1P53564 Gm38326-201ENSMUST00000194030 686 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Cux1P53564 Gm37095-201ENSMUST00000195421 205 ntBASIC6.83□□□□□ -1.32
Cux1P53564 Klrc1-202ENSMUST00000032271 822 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Cux1P53564 Olfr1162-201ENSMUST00000099837 945 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Cux1P53564 Gm43302-201ENSMUST00000050011 4310 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Cux1P53564 Gm6162-201ENSMUST00000194870 2930 ntBASIC6.83□□□□□ -1.32
Cux1P53564 Olfr895-202ENSMUST00000212156 1558 ntAPPRIS P1 TSL 3 BASIC6.83□□□□□ -1.32
Cux1P53564 Olfr911-ps1-202ENSMUST00000216496 3576 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms