Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm44748-201ENSMUST00000206040 658 ntTSL 5 BASIC4.6□□□□□ -1.67
HttP42859 AC156639.1-201ENSMUST00000216503 660 ntTSL 3 BASIC4.6□□□□□ -1.67
HttP42859 Gm45304-201ENSMUST00000210303 2828 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HttP42859 Gm37086-201ENSMUST00000193082 3452 ntBASIC4.6□□□□□ -1.67
HttP42859 Gm14849-201ENSMUST00000122293 2846 ntBASIC4.6□□□□□ -1.67
HttP42859 Ktn1-215ENSMUST00000189101 3761 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
HttP42859 Ifi44-201ENSMUST00000029671 2910 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HttP42859 Gm14365-201ENSMUST00000117535 587 ntBASIC4.6□□□□□ -1.67
HttP42859 Gm12204-201ENSMUST00000147412 333 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HttP42859 Gm8890-202ENSMUST00000177727 465 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
HttP42859 Gm27899-201ENSMUST00000184715 64 ntBASIC4.6□□□□□ -1.67
HttP42859 Gm29031-201ENSMUST00000185316 614 ntBASIC4.6□□□□□ -1.67
HttP42859 Gm29000-201ENSMUST00000185444 614 ntBASIC4.6□□□□□ -1.67
HttP42859 Gm28204-201ENSMUST00000185934 614 ntBASIC4.6□□□□□ -1.67
HttP42859 Gm28290-201ENSMUST00000186505 614 ntBASIC4.6□□□□□ -1.67
HttP42859 Gm28161-201ENSMUST00000186669 614 ntBASIC4.6□□□□□ -1.67
HttP42859 Gm28749-209ENSMUST00000189599 614 ntBASIC4.6□□□□□ -1.67
HttP42859 Gm29276-201ENSMUST00000190453 932 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HttP42859 Trbv28-201ENSMUST00000192804 264 ntBASIC4.6□□□□□ -1.67
HttP42859 Gm33163-201ENSMUST00000194504 614 ntBASIC4.6□□□□□ -1.67
HttP42859 Gm17829-201ENSMUST00000219782 344 ntBASIC4.6□□□□□ -1.67
HttP42859 Olfr1505-201ENSMUST00000081520 1103 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
HttP42859 Ube2nl-201ENSMUST00000085228 456 ntBASIC4.6□□□□□ -1.67
HttP42859 Ugt1a7c-202ENSMUST00000113135 3302 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
HttP42859 Sox6-210ENSMUST00000206034 8668 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
HttP42859 4932411N23Rik-201ENSMUST00000081074 3407 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
HttP42859 Olfr31-203ENSMUST00000217035 4126 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
HttP42859 Isx-202ENSMUST00000174427 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
HttP42859 Gm37571-201ENSMUST00000195048 614 ntTSL 3 BASIC4.59□□□□□ -1.67
HttP42859 Olfr1038-ps-202ENSMUST00000216665 4530 ntTSL 3 BASIC4.59□□□□□ -1.67
HttP42859 Gm43682-201ENSMUST00000202150 2090 ntBASIC4.59□□□□□ -1.67
HttP42859 Rbpj-202ENSMUST00000087360 5252 ntTSL 5 BASIC4.59□□□□□ -1.67
HttP42859 AC112274.1-201ENSMUST00000218957 4274 ntBASIC4.59□□□□□ -1.67
HttP42859 Pde1a-204ENSMUST00000102653 2439 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
HttP42859 CT025710.1-201ENSMUST00000222949 2533 ntBASIC4.59□□□□□ -1.67
HttP42859 Gm13268-201ENSMUST00000117485 433 ntBASIC4.59□□□□□ -1.67
HttP42859 Gm16024-201ENSMUST00000128841 171 ntTSL 3 BASIC4.59□□□□□ -1.67
HttP42859 AI838599-201ENSMUST00000133960 2953 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
HttP42859 Gm21232-201ENSMUST00000182187 1006 ntBASIC4.59□□□□□ -1.67
HttP42859 2010005H15Rik-202ENSMUST00000187183 639 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
HttP42859 Gm45080-201ENSMUST00000206648 283 ntBASIC4.59□□□□□ -1.67
HttP42859 Olfr151-201ENSMUST00000211893 1128 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
HttP42859 Gm40658-203ENSMUST00000222210 1070 ntTSL 5 BASIC4.59□□□□□ -1.67
HttP42859 4921515E04Rik-203ENSMUST00000227364 2309 ntBASIC4.59□□□□□ -1.67
HttP42859 Gm18594-201ENSMUST00000175733 1403 ntBASIC4.59□□□□□ -1.67
HttP42859 Mug2-201ENSMUST00000081777 4579 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
HttP42859 Cpne4-202ENSMUST00000077190 3409 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
HttP42859 Elovl6-201ENSMUST00000071402 5951 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
HttP42859 Olfr731-204ENSMUST00000214388 5438 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.68
HttP42859 Gm37262-201ENSMUST00000192816 1818 ntBASIC4.59□□□□□ -1.68
HttP42859 Ccnb2-ps-201ENSMUST00000118290 623 ntBASIC4.59□□□□□ -1.68
HttP42859 Gm37947-201ENSMUST00000192740 894 ntTSL 5 BASIC4.59□□□□□ -1.68
HttP42859 Gm44681-201ENSMUST00000208447 842 ntBASIC4.59□□□□□ -1.68
HttP42859 Dynap-201ENSMUST00000025390 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
HttP42859 Gm23297-201ENSMUST00000083184 127 ntBASIC4.59□□□□□ -1.68
HttP42859 Spta1-201ENSMUST00000027817 8406 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
HttP42859 Gm15304-201ENSMUST00000122150 2640 ntBASIC4.59□□□□□ -1.68
HttP42859 Fscb-201ENSMUST00000059833 3361 ntAPPRIS P1 BASIC4.59□□□□□ -1.68
HttP42859 Olfr1131-203ENSMUST00000216756 1459 ntTSL 3 BASIC4.58□□□□□ -1.68
HttP42859 Pls3-203ENSMUST00000114058 3032 ntTSL 5 BASIC4.58□□□□□ -1.68
HttP42859 Psd3-214ENSMUST00000212960 4562 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
HttP42859 Grik2-207ENSMUST00000218823 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HttP42859 Olfr769-203ENSMUST00000216906 4325 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
HttP42859 Fam122b-202ENSMUST00000114838 3536 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
HttP42859 Mecp2-205ENSMUST00000170481 10175 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
HttP42859 Cd44-201ENSMUST00000005218 5614 ntAPPRIS P4 TSL 1 (best) BASIC4.58□□□□□ -1.68
HttP42859 Abcb7-201ENSMUST00000033695 5667 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HttP42859 5330434G04Rik-202ENSMUST00000136406 3545 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HttP42859 Urb2-201ENSMUST00000034457 5853 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HttP42859 n-R5s48-201ENSMUST00000122482 110 ntBASIC4.58□□□□□ -1.68
HttP42859 Gm28941-201ENSMUST00000185536 1017 ntBASIC4.58□□□□□ -1.68
HttP42859 Gm42948-201ENSMUST00000199085 578 ntTSL 5 BASIC4.58□□□□□ -1.68
HttP42859 CT030182.3-201ENSMUST00000225986 582 ntBASIC4.58□□□□□ -1.68
HttP42859 Gm12582-201ENSMUST00000030555 697 ntBASIC4.58□□□□□ -1.68
HttP42859 Gm6177-201ENSMUST00000085589 465 ntBASIC4.58□□□□□ -1.68
HttP42859 Vmn1r183-201ENSMUST00000086012 918 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
HttP42859 Rbbp6-203ENSMUST00000098062 6345 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HttP42859 Eif2ak2-201ENSMUST00000024884 4313 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HttP42859 Gm43317-201ENSMUST00000197924 2544 ntBASIC4.58□□□□□ -1.68
HttP42859 Tcf4-207ENSMUST00000114985 8577 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HttP42859 Slfn9-202ENSMUST00000092840 3862 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
HttP42859 Igkv1-99-201ENSMUST00000103326 359 ntAPPRIS ALT2 BASIC4.58□□□□□ -1.68
HttP42859 n-R5s219-201ENSMUST00000104328 132 ntBASIC4.58□□□□□ -1.68
HttP42859 Gm10936-201ENSMUST00000105264 252 ntBASIC4.58□□□□□ -1.68
HttP42859 Ctnnd1-220ENSMUST00000111694 6362 ntAPPRIS P5 TSL 5 BASIC4.58□□□□□ -1.68
HttP42859 Gm12276-201ENSMUST00000121709 301 ntBASIC4.58□□□□□ -1.68
HttP42859 Ccr2-204ENSMUST00000171719 2265 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HttP42859 Gm35702-201ENSMUST00000198653 511 ntBASIC4.58□□□□□ -1.68
HttP42859 Gm31693-201ENSMUST00000200150 909 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HttP42859 Olfr566-202ENSMUST00000209952 1066 ntAPPRIS ALT1 TSL 3 BASIC4.58□□□□□ -1.68
HttP42859 Gm2080-201ENSMUST00000211299 1573 ntBASIC4.58□□□□□ -1.68
HttP42859 Clec2e-201ENSMUST00000032258 2099 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HttP42859 Olfr998-201ENSMUST00000052307 1012 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
HttP42859 Olfr566-201ENSMUST00000071393 951 ntAPPRIS P2 BASIC4.58□□□□□ -1.68
HttP42859 n-R5s151-201ENSMUST00000083959 119 ntBASIC4.58□□□□□ -1.68
HttP42859 Dazl-201ENSMUST00000010736 2942 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HttP42859 Olfr122-204ENSMUST00000217119 2224 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
HttP42859 C2cd6-201ENSMUST00000097080 2131 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
HttP42859 Gm8267-203ENSMUST00000226900 1592 ntAPPRIS ALT2 BASIC4.57□□□□□ -1.68
HttP42859 AC159326.1-201ENSMUST00000219989 1302 ntBASIC4.57□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 67 ms