Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Gm30097-201ENSMUST00000193581 447 ntTSL 5 BASIC4.4□□□□□ -1.71
Sox6P40645 1700023G09Rik-202ENSMUST00000194671 308 ntTSL 3 BASIC4.4□□□□□ -1.71
Sox6P40645 Gm2053-201ENSMUST00000195671 631 ntBASIC4.4□□□□□ -1.71
Sox6P40645 Gm43574-201ENSMUST00000196226 809 ntTSL 3 BASIC4.4□□□□□ -1.71
Sox6P40645 Gm43044-201ENSMUST00000198091 379 ntBASIC4.4□□□□□ -1.71
Sox6P40645 Gm4410-201ENSMUST00000199349 686 ntBASIC4.4□□□□□ -1.71
Sox6P40645 Gm43968-201ENSMUST00000203388 389 ntBASIC4.4□□□□□ -1.71
Sox6P40645 Gm30606-201ENSMUST00000212801 847 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Sox6P40645 AC134537.2-201ENSMUST00000217770 575 ntBASIC4.4□□□□□ -1.71
Sox6P40645 Pln-204ENSMUST00000219491 771 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
Sox6P40645 AC079644.1-201ENSMUST00000220586 405 ntBASIC4.4□□□□□ -1.71
Sox6P40645 Gm46996-201ENSMUST00000220924 408 ntBASIC4.4□□□□□ -1.71
Sox6P40645 AC125539.2-202ENSMUST00000227983 587 ntBASIC4.4□□□□□ -1.71
Sox6P40645 AC125539.2-201ENSMUST00000228339 753 ntBASIC4.4□□□□□ -1.71
Sox6P40645 4930583I09Rik-201ENSMUST00000024896 630 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Sox6P40645 Olfr974-201ENSMUST00000062833 1080 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Sox6P40645 Vmn1r33-201ENSMUST00000079678 1036 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Sox6P40645 Gm24919-201ENSMUST00000083020 106 ntBASIC4.4□□□□□ -1.71
Sox6P40645 Mir129-2-201ENSMUST00000083577 90 ntBASIC4.4□□□□□ -1.71
Sox6P40645 Defb26-201ENSMUST00000099205 561 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Sox6P40645 Gm28488-203ENSMUST00000188792 1498 ntTSL 5 BASIC4.4□□□□□ -1.71
Sox6P40645 Chl1-201ENSMUST00000066905 7562 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.71
Sox6P40645 Pkhd1l1-203ENSMUST00000209244 12949 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Sox6P40645 Dnah12-201ENSMUST00000022433 12009 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Sox6P40645 Abca16-201ENSMUST00000056042 5085 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
Sox6P40645 A730046J19Rik-201ENSMUST00000135687 4707 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Sox6P40645 Tsga10-203ENSMUST00000114902 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
Sox6P40645 Vmn1r169-204ENSMUST00000227932 2745 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Sox6P40645 Gm44171-201ENSMUST00000203701 2109 ntBASIC4.4□□□□□ -1.71
Sox6P40645 Gm36529-201ENSMUST00000222495 1529 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Sox6P40645 Olfr19-202ENSMUST00000206365 1967 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.71
Sox6P40645 Pign-205ENSMUST00000186485 6759 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Sox6P40645 Akap4-201ENSMUST00000057101 2851 ntAPPRIS P4 TSL 1 (best) BASIC4.39□□□□□ -1.71
Sox6P40645 Clk4-202ENSMUST00000109111 1427 ntTSL 2 BASIC4.39□□□□□ -1.71
Sox6P40645 Vmn1r35-202ENSMUST00000227346 1854 ntBASIC4.39□□□□□ -1.71
Sox6P40645 Vmn1r46-202ENSMUST00000205088 10770 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
Sox6P40645 Vmn2r86-201ENSMUST00000170257 3039 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Sox6P40645 Olfr1176-202ENSMUST00000213778 2823 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Sox6P40645 Gm43200-201ENSMUST00000200385 2161 ntBASIC4.39□□□□□ -1.71
Sox6P40645 Gm43010-201ENSMUST00000195993 2878 ntBASIC4.39□□□□□ -1.71
Sox6P40645 BC003331-204ENSMUST00000097547 2851 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
Sox6P40645 Olfr328-202ENSMUST00000108824 1199 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
Sox6P40645 Gm14995-201ENSMUST00000117135 391 ntBASIC4.39□□□□□ -1.71
Sox6P40645 Itpa-ps3-201ENSMUST00000119034 395 ntBASIC4.39□□□□□ -1.71
Sox6P40645 Gm15171-201ENSMUST00000122191 334 ntBASIC4.39□□□□□ -1.71
Sox6P40645 Gm12854-201ENSMUST00000128518 297 ntBASIC4.39□□□□□ -1.71
Sox6P40645 Gm15245-201ENSMUST00000129410 1186 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Sox6P40645 Gm26153-201ENSMUST00000157433 127 ntBASIC4.39□□□□□ -1.71
Sox6P40645 Ctla2b-202ENSMUST00000171347 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
Sox6P40645 Gm27355-201ENSMUST00000185045 128 ntBASIC4.39□□□□□ -1.71
Sox6P40645 Gm28118-201ENSMUST00000185957 294 ntBASIC4.39□□□□□ -1.71
Sox6P40645 Gm43768-201ENSMUST00000198380 1258 ntBASIC4.39□□□□□ -1.71
Sox6P40645 Gm43342-201ENSMUST00000201027 924 ntTSL 3 BASIC4.39□□□□□ -1.71
Sox6P40645 Gm44876-201ENSMUST00000205394 670 ntTSL 3 BASIC4.39□□□□□ -1.71
Sox6P40645 Gm19201-201ENSMUST00000210127 778 ntBASIC4.39□□□□□ -1.71
Sox6P40645 Gm45261-201ENSMUST00000211023 594 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Sox6P40645 Gm33756-201ENSMUST00000211358 636 ntTSL 5 BASIC4.39□□□□□ -1.71
Sox6P40645 Gm32171-201ENSMUST00000217419 1043 ntTSL 5 BASIC4.39□□□□□ -1.71
Sox6P40645 AC122508.1-201ENSMUST00000218365 233 ntTSL 5 BASIC4.39□□□□□ -1.71
Sox6P40645 AC131720.3-201ENSMUST00000219113 275 ntBASIC4.39□□□□□ -1.71
Sox6P40645 AC124742.1-201ENSMUST00000219909 547 ntTSL 3 BASIC4.39□□□□□ -1.71
Sox6P40645 AC165283.1-201ENSMUST00000223390 307 ntBASIC4.39□□□□□ -1.71
Sox6P40645 AC159263.3-201ENSMUST00000223434 460 ntBASIC4.39□□□□□ -1.71
Sox6P40645 AC140368.1-202ENSMUST00000226131 658 ntBASIC4.39□□□□□ -1.71
Sox6P40645 Cst9-201ENSMUST00000028935 687 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Sox6P40645 Olfr1020-201ENSMUST00000055840 1079 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Sox6P40645 Olfr816-201ENSMUST00000071605 939 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Sox6P40645 Gm7665-201ENSMUST00000076710 297 ntBASIC4.39□□□□□ -1.71
Sox6P40645 Gm6065-201ENSMUST00000081336 492 ntBASIC4.39□□□□□ -1.71
Sox6P40645 Snord15b-201ENSMUST00000083032 145 ntBASIC4.39□□□□□ -1.71
Sox6P40645 Olfr1116-201ENSMUST00000090717 924 ntAPPRIS P2 BASIC4.39□□□□□ -1.71
Sox6P40645 Olfr1104-201ENSMUST00000099869 933 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Sox6P40645 Cysltr1-202ENSMUST00000113480 5142 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Sox6P40645 Gm26522-201ENSMUST00000181565 1555 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Sox6P40645 Fbxl17-204ENSMUST00000112840 3667 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Sox6P40645 Gm37461-201ENSMUST00000193929 3704 ntBASIC4.38□□□□□ -1.71
Sox6P40645 Ctsj-202ENSMUST00000224224 1421 ntAPPRIS ALT2 BASIC4.38□□□□□ -1.71
Sox6P40645 Pof1b-201ENSMUST00000039887 3886 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Sox6P40645 Macc1-205ENSMUST00000222784 4710 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Sox6P40645 Vmn1r52-202ENSMUST00000226520 3125 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Sox6P40645 Gm14444-201ENSMUST00000109069 919 ntTSL 2 BASIC4.38□□□□□ -1.71
Sox6P40645 Gm11346-201ENSMUST00000118346 704 ntBASIC4.38□□□□□ -1.71
Sox6P40645 Klra4-201ENSMUST00000119096 1245 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Sox6P40645 Gm11822-201ENSMUST00000119177 415 ntBASIC4.38□□□□□ -1.71
Sox6P40645 A230083N12Rik-201ENSMUST00000126646 572 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Sox6P40645 Gm568-201ENSMUST00000135777 506 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Sox6P40645 Gm26373-201ENSMUST00000157833 103 ntBASIC4.38□□□□□ -1.71
Sox6P40645 Dnaja1-ps-201ENSMUST00000162103 642 ntBASIC4.38□□□□□ -1.71
Sox6P40645 Olfr723-201ENSMUST00000164157 1006 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Sox6P40645 Jpx-201ENSMUST00000181020 3802 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Sox6P40645 Snhg14-201ENSMUST00000185272 726 ntTSL 5 BASIC4.38□□□□□ -1.71
Sox6P40645 Gm19585-201ENSMUST00000186007 587 ntTSL 2 BASIC4.38□□□□□ -1.71
Sox6P40645 1700029B22Rik-202ENSMUST00000186532 694 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Sox6P40645 4930540E01Rik-201ENSMUST00000192569 1146 ntBASIC4.38□□□□□ -1.71
Sox6P40645 Gm38163-201ENSMUST00000194112 482 ntTSL 5 BASIC4.38□□□□□ -1.71
Sox6P40645 Gm43507-201ENSMUST00000196411 675 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Sox6P40645 Gm30043-201ENSMUST00000196689 733 ntTSL 2 BASIC4.38□□□□□ -1.71
Sox6P40645 Gm43005-201ENSMUST00000199015 648 ntBASIC4.38□□□□□ -1.71
Sox6P40645 Kap-202ENSMUST00000203168 464 ntAPPRIS ALT2 TSL 3 BASIC4.38□□□□□ -1.71
Sox6P40645 Olfr723-202ENSMUST00000206058 1078 ntAPPRIS P1 TSL 3 BASIC4.38□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 85 ms