Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 Gm42459-201ENSMUST00000199679 742 ntBASIC5.01□□□□□ -1.61
Rfc1P35601 Gm33962-202ENSMUST00000205195 630 ntTSL 5 BASIC5.01□□□□□ -1.61
Rfc1P35601 Gm44683-201ENSMUST00000209088 484 ntBASIC5.01□□□□□ -1.61
Rfc1P35601 Olfr588-ps1-202ENSMUST00000210115 912 ntBASIC5.01□□□□□ -1.61
Rfc1P35601 AC131720.3-201ENSMUST00000219113 275 ntBASIC5.01□□□□□ -1.61
Rfc1P35601 AC163354.1-207ENSMUST00000221270 1243 ntTSL 5 BASIC5.01□□□□□ -1.61
Rfc1P35601 9530050K03Rik-201ENSMUST00000221663 1299 ntBASIC5.01□□□□□ -1.61
Rfc1P35601 AC164424.1-201ENSMUST00000221690 170 ntBASIC5.01□□□□□ -1.61
Rfc1P35601 AC241593.2-201ENSMUST00000225099 510 ntBASIC5.01□□□□□ -1.61
Rfc1P35601 Rnase12-202ENSMUST00000227764 673 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Rfc1P35601 Olfr741-201ENSMUST00000071932 936 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Rfc1P35601 Defb35-201ENSMUST00000076786 267 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Rfc1P35601 Olfr611-201ENSMUST00000078108 972 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Rfc1P35601 Mir215-201ENSMUST00000083628 112 ntBASIC5.01□□□□□ -1.61
Rfc1P35601 Gm6177-201ENSMUST00000085589 465 ntBASIC5.01□□□□□ -1.61
Rfc1P35601 Rnase12-201ENSMUST00000089798 545 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Rfc1P35601 4930562D21Rik-201ENSMUST00000123894 1750 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Rfc1P35601 Zfp984-202ENSMUST00000122309 2405 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Rfc1P35601 Gm28394-201ENSMUST00000186805 1495 ntTSL 5 BASIC5□□□□□ -1.61
Rfc1P35601 Gm28570-201ENSMUST00000188300 1495 ntTSL 5 BASIC5□□□□□ -1.61
Rfc1P35601 Olfr672-202ENSMUST00000213942 1490 ntAPPRIS P1 TSL 3 BASIC5□□□□□ -1.61
Rfc1P35601 Nxt2-202ENSMUST00000112913 2538 ntTSL 3 BASIC5□□□□□ -1.61
Rfc1P35601 Erv3-201ENSMUST00000040941 3378 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Rfc1P35601 Clk4-202ENSMUST00000109111 1427 ntTSL 2 BASIC5□□□□□ -1.61
Rfc1P35601 Igkv4-71-201ENSMUST00000101325 288 ntAPPRIS P1 BASIC5□□□□□ -1.61
Rfc1P35601 Traj16-201ENSMUST00000103725 61 ntAPPRIS P1 BASIC5□□□□□ -1.61
Rfc1P35601 Gm24170-201ENSMUST00000104124 133 ntBASIC5□□□□□ -1.61
Rfc1P35601 Prl8a8-202ENSMUST00000110350 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
Rfc1P35601 Gm649-201ENSMUST00000117284 1054 ntBASIC5□□□□□ -1.61
Rfc1P35601 Olfr990-ps1-201ENSMUST00000120485 904 ntBASIC5□□□□□ -1.61
Rfc1P35601 Gm11805-201ENSMUST00000121238 600 ntBASIC5□□□□□ -1.61
Rfc1P35601 Gm25106-201ENSMUST00000122672 134 ntBASIC5□□□□□ -1.61
Rfc1P35601 2210408F21Rik-203ENSMUST00000133510 429 ntTSL 3 BASIC5□□□□□ -1.61
Rfc1P35601 Gm11381-201ENSMUST00000138574 420 ntTSL 5 BASIC5□□□□□ -1.61
Rfc1P35601 2210408F21Rik-206ENSMUST00000138653 417 ntTSL 5 BASIC5□□□□□ -1.61
Rfc1P35601 Gm25433-201ENSMUST00000158283 286 ntBASIC5□□□□□ -1.61
Rfc1P35601 Gm26169-201ENSMUST00000158420 135 ntBASIC5□□□□□ -1.61
Rfc1P35601 Vmn2r-ps16-201ENSMUST00000178737 377 ntBASIC5□□□□□ -1.61
Rfc1P35601 Vmn2r-ps15-201ENSMUST00000180112 377 ntBASIC5□□□□□ -1.61
Rfc1P35601 Gm27315-201ENSMUST00000183977 154 ntBASIC5□□□□□ -1.61
Rfc1P35601 1700015G11Rik-202ENSMUST00000185758 366 ntAPPRIS ALT2 TSL 3 BASIC5□□□□□ -1.61
Rfc1P35601 4930519F24Rik-201ENSMUST00000185764 579 ntTSL 1 (best) BASIC5□□□□□ -1.61
Rfc1P35601 Gm9569-201ENSMUST00000187492 787 ntBASIC5□□□□□ -1.61
Rfc1P35601 Gm37072-201ENSMUST00000194570 837 ntBASIC5□□□□□ -1.61
Rfc1P35601 Gm42830-201ENSMUST00000196642 313 ntBASIC5□□□□□ -1.61
Rfc1P35601 AI506816-203ENSMUST00000198461 503 ntTSL 5 BASIC5□□□□□ -1.61
Rfc1P35601 Gm2623-201ENSMUST00000199229 286 ntBASIC5□□□□□ -1.61
Rfc1P35601 Gm43554-201ENSMUST00000199987 186 ntBASIC5□□□□□ -1.61
Rfc1P35601 AC122464.1-201ENSMUST00000202789 770 ntBASIC5□□□□□ -1.61
Rfc1P35601 Gm43892-201ENSMUST00000204373 265 ntBASIC5□□□□□ -1.61
Rfc1P35601 Gm19366-201ENSMUST00000206996 156 ntBASIC5□□□□□ -1.61
Rfc1P35601 AC127581.1-201ENSMUST00000214084 771 ntTSL 5 BASIC5□□□□□ -1.61
Rfc1P35601 AC165245.1-201ENSMUST00000214181 636 ntTSL 3 BASIC5□□□□□ -1.61
Rfc1P35601 AC118733.1-201ENSMUST00000217387 1217 ntBASIC5□□□□□ -1.61
Rfc1P35601 AC164624.1-201ENSMUST00000219148 1025 ntTSL 5 BASIC5□□□□□ -1.61
Rfc1P35601 AC174776.1-201ENSMUST00000221509 405 ntBASIC5□□□□□ -1.61
Rfc1P35601 AC174776.2-201ENSMUST00000222561 405 ntBASIC5□□□□□ -1.61
Rfc1P35601 AC154576.2-203ENSMUST00000224736 253 ntBASIC5□□□□□ -1.61
Rfc1P35601 AC158388.1-201ENSMUST00000225441 256 ntBASIC5□□□□□ -1.61
Rfc1P35601 Vmn1r16-201ENSMUST00000227168 912 ntAPPRIS P2 BASIC5□□□□□ -1.61
Rfc1P35601 AC154270.1-201ENSMUST00000227226 426 ntBASIC5□□□□□ -1.61
Rfc1P35601 AC154730.1-201ENSMUST00000227874 816 ntBASIC5□□□□□ -1.61
Rfc1P35601 Ccl11-201ENSMUST00000000342 1082 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Rfc1P35601 Olfr906-201ENSMUST00000045493 936 ntAPPRIS P1 BASIC5□□□□□ -1.61
Rfc1P35601 Rybp-ps-201ENSMUST00000069489 681 ntBASIC5□□□□□ -1.61
Rfc1P35601 Snora52-201ENSMUST00000082732 137 ntBASIC5□□□□□ -1.61
Rfc1P35601 n-R5s36-201ENSMUST00000082998 119 ntBASIC5□□□□□ -1.61
Rfc1P35601 Gm29325-201ENSMUST00000190705 2528 ntBASIC5□□□□□ -1.61
Rfc1P35601 Gm37527-201ENSMUST00000192406 3547 ntBASIC5□□□□□ -1.61
Rfc1P35601 Gm43166-201ENSMUST00000202871 4379 ntTSL 5 BASIC5□□□□□ -1.61
Rfc1P35601 Vmn1r184-202ENSMUST00000227230 7999 ntAPPRIS P1 BASIC5□□□□□ -1.61
Rfc1P35601 Otc-202ENSMUST00000115528 2997 ntTSL 1 (best) BASIC5□□□□□ -1.61
Rfc1P35601 Gm37588-201ENSMUST00000195024 2496 ntBASIC5□□□□□ -1.61
Rfc1P35601 Gm12289-201ENSMUST00000130860 2235 ntTSL 1 (best) BASIC5□□□□□ -1.61
Rfc1P35601 Ncoa7-207ENSMUST00000215740 7043 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
Rfc1P35601 1700017N19Rik-204ENSMUST00000188736 1709 ntTSL 5 BASIC5□□□□□ -1.61
Rfc1P35601 4932429P05Rik-201ENSMUST00000113958 3093 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Rfc1P35601 Mlip-205ENSMUST00000183955 3069 ntAPPRIS P5 TSL 5 BASIC5□□□□□ -1.61
Rfc1P35601 Dmd-201ENSMUST00000113991 4438 ntTSL 1 (best) BASIC5□□□□□ -1.61
Rfc1P35601 Vmn1r72-203ENSMUST00000227010 6279 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Rfc1P35601 Gm43705-201ENSMUST00000195958 3717 ntBASIC4.99□□□□□ -1.61
Rfc1P35601 Gm43882-201ENSMUST00000204871 2264 ntBASIC4.99□□□□□ -1.61
Rfc1P35601 Vmn1r80-204ENSMUST00000227471 6368 ntBASIC4.99□□□□□ -1.61
Rfc1P35601 Gm10997-201ENSMUST00000210294 1500 ntBASIC4.99□□□□□ -1.61
Rfc1P35601 Cd84-205ENSMUST00000155802 3291 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
Rfc1P35601 Trbv26-201ENSMUST00000103280 344 ntAPPRIS ALT2 BASIC4.99□□□□□ -1.61
Rfc1P35601 Trav12n-1-201ENSMUST00000103587 344 ntAPPRIS ALT2 BASIC4.99□□□□□ -1.61
Rfc1P35601 Gm13023-202ENSMUST00000105770 833 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
Rfc1P35601 Gm6893-201ENSMUST00000118385 522 ntBASIC4.99□□□□□ -1.61
Rfc1P35601 Gm14521-201ENSMUST00000119545 350 ntBASIC4.99□□□□□ -1.61
Rfc1P35601 Gm7189-201ENSMUST00000119811 429 ntBASIC4.99□□□□□ -1.61
Rfc1P35601 Gm13452-201ENSMUST00000120896 1097 ntBASIC4.99□□□□□ -1.61
Rfc1P35601 Gm12978-201ENSMUST00000121250 522 ntBASIC4.99□□□□□ -1.61
Rfc1P35601 Gm15245-201ENSMUST00000129410 1186 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Rfc1P35601 Gm12259-201ENSMUST00000138391 328 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Rfc1P35601 Snora81-201ENSMUST00000157310 178 ntBASIC4.99□□□□□ -1.61
Rfc1P35601 Gm23673-201ENSMUST00000157474 298 ntBASIC4.99□□□□□ -1.61
Rfc1P35601 Gm3008-201ENSMUST00000160566 571 ntBASIC4.99□□□□□ -1.61
Rfc1P35601 Plgrkt-201ENSMUST00000016639 1012 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Rfc1P35601 V1rd19-201ENSMUST00000173571 1157 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 70 ms