Protein–RNA interactions for Protein: P31313

Hoxc11, Homeobox protein Hox-C11, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc11P31313 4930405L22Rik-201ENSMUST00000198088 585 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Hoxc11P31313 Csn1s2a-209ENSMUST00000200322 797 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
Hoxc11P31313 Nts-201ENSMUST00000020040 1248 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Hoxc11P31313 Gm40323-201ENSMUST00000200649 645 ntTSL 2 BASIC5.1□□□□□ -1.59
Hoxc11P31313 Gm43262-201ENSMUST00000202970 1219 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Hoxc11P31313 Gm45507-201ENSMUST00000210611 519 ntTSL 5 BASIC5.1□□□□□ -1.59
Hoxc11P31313 AC183268.2-201ENSMUST00000214513 446 ntBASIC5.1□□□□□ -1.59
Hoxc11P31313 AC153968.2-201ENSMUST00000215579 1140 ntBASIC5.1□□□□□ -1.59
Hoxc11P31313 AC159256.1-201ENSMUST00000224298 1039 ntBASIC5.1□□□□□ -1.59
Hoxc11P31313 AC121542.1-201ENSMUST00000227245 721 ntBASIC5.1□□□□□ -1.59
Hoxc11P31313 Vmn1r35-205ENSMUST00000227961 1789 ntBASIC5.1□□□□□ -1.59
Hoxc11P31313 Mmp1a-201ENSMUST00000034492 2022 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Hoxc11P31313 Olfr710-201ENSMUST00000055923 1312 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Hoxc11P31313 Olfr1497-201ENSMUST00000061993 945 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Hoxc11P31313 Gm4963-201ENSMUST00000072718 378 ntBASIC5.1□□□□□ -1.59
Hoxc11P31313 Ube2d4-201ENSMUST00000075109 406 ntTSL 5 BASIC5.1□□□□□ -1.59
Hoxc11P31313 Rgsl1-201ENSMUST00000124558 3642 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Hoxc11P31313 Tmem67-201ENSMUST00000050686 3456 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
Hoxc11P31313 Gm45033-201ENSMUST00000206710 3167 ntBASIC5.1□□□□□ -1.59
Hoxc11P31313 C230071H17Rik-201ENSMUST00000196044 2973 ntBASIC5.1□□□□□ -1.59
Hoxc11P31313 Kcnh7-201ENSMUST00000075052 13321 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Hoxc11P31313 Cep57l1-201ENSMUST00000019951 2177 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
Hoxc11P31313 Gm44171-201ENSMUST00000203701 2109 ntBASIC5.09□□□□□ -1.59
Hoxc11P31313 Olfr31-202ENSMUST00000206009 4017 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
Hoxc11P31313 Zfp11-201ENSMUST00000049778 3929 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Hoxc11P31313 Vmn1r171-201ENSMUST00000078458 1581 ntAPPRIS P2 BASIC5.09□□□□□ -1.59
Hoxc11P31313 Gm44235-201ENSMUST00000204312 3058 ntBASIC5.09□□□□□ -1.59
Hoxc11P31313 Gm14139-202ENSMUST00000109929 1485 ntTSL 5 BASIC5.09□□□□□ -1.59
Hoxc11P31313 Gm4070-201ENSMUST00000106766 8795 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Hoxc11P31313 Gvin1-201ENSMUST00000006667 8795 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Hoxc11P31313 Gm20541-201ENSMUST00000173035 1406 ntBASIC5.09□□□□□ -1.59
Hoxc11P31313 Naalad2-207ENSMUST00000172171 4066 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Hoxc11P31313 Olfr393-201ENSMUST00000102523 939 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Hoxc11P31313 Cabyr-203ENSMUST00000119108 818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
Hoxc11P31313 Vmn1r-ps109-201ENSMUST00000119308 725 ntBASIC5.09□□□□□ -1.59
Hoxc11P31313 Vmn1r-ps92-201ENSMUST00000120775 517 ntBASIC5.09□□□□□ -1.59
Hoxc11P31313 Gm12162-201ENSMUST00000123422 154 ntTSL 5 BASIC5.09□□□□□ -1.59
Hoxc11P31313 1700016G14Rik-201ENSMUST00000136906 863 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Hoxc11P31313 Gm13584-201ENSMUST00000137134 603 ntTSL 3 BASIC5.09□□□□□ -1.59
Hoxc11P31313 Gm15589-201ENSMUST00000144193 271 ntTSL 3 BASIC5.09□□□□□ -1.59
Hoxc11P31313 Gm25383-201ENSMUST00000157810 144 ntBASIC5.09□□□□□ -1.59
Hoxc11P31313 Gm25846-201ENSMUST00000158013 135 ntBASIC5.09□□□□□ -1.59
Hoxc11P31313 Gm25603-201ENSMUST00000158361 105 ntBASIC5.09□□□□□ -1.59
Hoxc11P31313 Gm12002-203ENSMUST00000174550 923 ntTSL 3 BASIC5.09□□□□□ -1.59
Hoxc11P31313 Gm27234-201ENSMUST00000183362 581 ntTSL 5 BASIC5.09□□□□□ -1.59
Hoxc11P31313 Mir7222-201ENSMUST00000183740 75 ntBASIC5.09□□□□□ -1.59
Hoxc11P31313 Gm9775-201ENSMUST00000189402 331 ntBASIC5.09□□□□□ -1.59
Hoxc11P31313 Gm28745-201ENSMUST00000190069 305 ntBASIC5.09□□□□□ -1.59
Hoxc11P31313 Gm38108-201ENSMUST00000193891 399 ntTSL 5 BASIC5.09□□□□□ -1.59
Hoxc11P31313 Gm2053-201ENSMUST00000195671 631 ntBASIC5.09□□□□□ -1.59
Hoxc11P31313 Gm42542-201ENSMUST00000197978 268 ntBASIC5.09□□□□□ -1.59
Hoxc11P31313 Gm9173-201ENSMUST00000198054 400 ntBASIC5.09□□□□□ -1.59
Hoxc11P31313 Gm43629-201ENSMUST00000201782 704 ntBASIC5.09□□□□□ -1.59
Hoxc11P31313 Olfr915-201ENSMUST00000215191 933 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Hoxc11P31313 AC132384.13-201ENSMUST00000219556 1159 ntBASIC5.09□□□□□ -1.59
Hoxc11P31313 AC153840.1-201ENSMUST00000219685 313 ntBASIC5.09□□□□□ -1.59
Hoxc11P31313 Gm30738-201ENSMUST00000221346 502 ntBASIC5.09□□□□□ -1.59
Hoxc11P31313 AC140210.1-201ENSMUST00000224961 534 ntBASIC5.09□□□□□ -1.59
Hoxc11P31313 1700129C05Rik-201ENSMUST00000022548 1067 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.59
Hoxc11P31313 Tmed11-201ENSMUST00000004943 763 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Hoxc11P31313 Olfr655-201ENSMUST00000057385 927 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Hoxc11P31313 Uts2b-201ENSMUST00000070531 835 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Hoxc11P31313 Gm23514-201ENSMUST00000082827 130 ntBASIC5.09□□□□□ -1.59
Hoxc11P31313 Gm25139-201ENSMUST00000083247 210 ntBASIC5.09□□□□□ -1.59
Hoxc11P31313 Defb25-201ENSMUST00000099203 293 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Hoxc11P31313 Vmn2r-ps123-201ENSMUST00000176763 2410 ntBASIC5.09□□□□□ -1.59
Hoxc11P31313 Gm42967-201ENSMUST00000198647 2312 ntBASIC5.09□□□□□ -1.59
Hoxc11P31313 Ccnb3-201ENSMUST00000056725 4475 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Hoxc11P31313 Olfr198-202ENSMUST00000208244 2200 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
Hoxc11P31313 Zbtb38-212ENSMUST00000152594 7406 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
Hoxc11P31313 Olfr535-203ENSMUST00000213715 5033 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
Hoxc11P31313 Pum2-210ENSMUST00000169089 3295 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
Hoxc11P31313 Ms4a7-201ENSMUST00000025574 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Hoxc11P31313 Gm7298-201ENSMUST00000204124 4657 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Hoxc11P31313 Olfr980-202ENSMUST00000216463 3050 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Hoxc11P31313 Gm37834-201ENSMUST00000194517 3035 ntBASIC5.08□□□□□ -1.6
Hoxc11P31313 Mug-ps1-201ENSMUST00000186891 4386 ntBASIC5.08□□□□□ -1.6
Hoxc11P31313 Vmn1r-ps73-201ENSMUST00000173130 2120 ntBASIC5.08□□□□□ -1.6
Hoxc11P31313 Fat1-203ENSMUST00000189017 14651 ntTSL 5 BASIC5.08□□□□□ -1.6
Hoxc11P31313 AC116797.1-201ENSMUST00000223988 3955 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Hoxc11P31313 Gm42548-201ENSMUST00000202669 3933 ntBASIC5.08□□□□□ -1.6
Hoxc11P31313 Igkv10-95-201ENSMUST00000103329 287 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Hoxc11P31313 Gm22266-201ENSMUST00000104011 138 ntBASIC5.08□□□□□ -1.6
Hoxc11P31313 Defa-ps1-201ENSMUST00000119062 282 ntBASIC5.08□□□□□ -1.6
Hoxc11P31313 Gm12281-201ENSMUST00000119536 298 ntBASIC5.08□□□□□ -1.6
Hoxc11P31313 Gm11584-201ENSMUST00000120636 325 ntBASIC5.08□□□□□ -1.6
Hoxc11P31313 Gm11278-201ENSMUST00000121002 997 ntBASIC5.08□□□□□ -1.6
Hoxc11P31313 Defa-ps6-201ENSMUST00000122172 282 ntBASIC5.08□□□□□ -1.6
Hoxc11P31313 Gm24840-201ENSMUST00000122603 147 ntBASIC5.08□□□□□ -1.6
Hoxc11P31313 Mettl4-ps1-201ENSMUST00000127676 1272 ntBASIC5.08□□□□□ -1.6
Hoxc11P31313 Tmem216-206ENSMUST00000154383 927 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
Hoxc11P31313 Vmn1r128-201ENSMUST00000169165 924 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Hoxc11P31313 Stx5a-215ENSMUST00000176570 563 ntTSL 2 BASIC5.08□□□□□ -1.6
Hoxc11P31313 Gm27543-201ENSMUST00000183562 177 ntBASIC5.08□□□□□ -1.6
Hoxc11P31313 Gm29532-201ENSMUST00000185593 622 ntTSL 5 BASIC5.08□□□□□ -1.6
Hoxc11P31313 Gm29504-201ENSMUST00000185605 537 ntTSL 5 BASIC5.08□□□□□ -1.6
Hoxc11P31313 Gm29360-201ENSMUST00000185625 537 ntTSL 5 BASIC5.08□□□□□ -1.6
Hoxc11P31313 Gm28296-202ENSMUST00000186151 622 ntTSL 5 BASIC5.08□□□□□ -1.6
Hoxc11P31313 Gm29498-201ENSMUST00000186449 537 ntTSL 5 BASIC5.08□□□□□ -1.6
Hoxc11P31313 Gm28660-201ENSMUST00000186496 253 ntBASIC5.08□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms