Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Nufip2-201ENSMUST00000100802 5158 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
Lire1P11260 Gm26853-201ENSMUST00000180757 4010 ntTSL 5 BASIC4.97□□□□□ -1.61
Lire1P11260 Vmn1r84-205ENSMUST00000228653 2769 ntAPPRIS ALT2 BASIC4.97□□□□□ -1.61
Lire1P11260 Gm16041-201ENSMUST00000144339 3725 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Lire1P11260 5930409G06Rik-201ENSMUST00000192347 1544 ntBASIC4.97□□□□□ -1.61
Lire1P11260 Ccr2-204ENSMUST00000171719 2265 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Lire1P11260 Olfr126-202ENSMUST00000213844 1958 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.61
Lire1P11260 Fscb-201ENSMUST00000059833 3361 ntAPPRIS P1 BASIC4.96□□□□□ -1.61
Lire1P11260 Hrnr-202ENSMUST00000093774 11187 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.61
Lire1P11260 Olfr365-203ENSMUST00000218602 5374 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Lire1P11260 Iqch-203ENSMUST00000163624 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
Lire1P11260 Rev3l-207ENSMUST00000164763 10399 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Lire1P11260 Gm43668-201ENSMUST00000197014 5342 ntBASIC4.96□□□□□ -1.62
Lire1P11260 Dbpht2-202ENSMUST00000221311 5341 ntBASIC4.96□□□□□ -1.62
Lire1P11260 Olfr705-202ENSMUST00000213721 3001 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Lire1P11260 Olfr291-202ENSMUST00000217039 3471 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.62
Lire1P11260 Rps15a-201ENSMUST00000106588 640 ntAPPRIS P1 TSL 3 BASIC4.96□□□□□ -1.62
Lire1P11260 Scgb1b22-ps-201ENSMUST00000116008 280 ntBASIC4.96□□□□□ -1.62
Lire1P11260 Gm15021-201ENSMUST00000117832 742 ntBASIC4.96□□□□□ -1.62
Lire1P11260 Gm6427-201ENSMUST00000118721 979 ntBASIC4.96□□□□□ -1.62
Lire1P11260 Olfr383-ps1-201ENSMUST00000118895 935 ntBASIC4.96□□□□□ -1.62
Lire1P11260 Rpl23a-ps4-201ENSMUST00000121008 455 ntBASIC4.96□□□□□ -1.62
Lire1P11260 Gm3160-201ENSMUST00000128343 607 ntBASIC4.96□□□□□ -1.62
Lire1P11260 Gm11466-201ENSMUST00000148017 291 ntTSL 3 BASIC4.96□□□□□ -1.62
Lire1P11260 Gm23743-201ENSMUST00000157389 274 ntBASIC4.96□□□□□ -1.62
Lire1P11260 Mir1963-201ENSMUST00000158594 59 ntBASIC4.96□□□□□ -1.62
Lire1P11260 Gm25971-201ENSMUST00000158953 286 ntBASIC4.96□□□□□ -1.62
Lire1P11260 Gm5087-203ENSMUST00000161835 814 ntTSL 2 BASIC4.96□□□□□ -1.62
Lire1P11260 Gm16490-201ENSMUST00000165299 351 ntBASIC4.96□□□□□ -1.62
Lire1P11260 Gm6673-201ENSMUST00000166114 700 ntBASIC4.96□□□□□ -1.62
Lire1P11260 Gm23806-201ENSMUST00000175157 109 ntBASIC4.96□□□□□ -1.62
Lire1P11260 Gm25525-201ENSMUST00000177701 107 ntBASIC4.96□□□□□ -1.62
Lire1P11260 Gm26178-201ENSMUST00000177706 107 ntBASIC4.96□□□□□ -1.62
Lire1P11260 Gm26465-201ENSMUST00000178517 107 ntBASIC4.96□□□□□ -1.62
Lire1P11260 Gm24317-201ENSMUST00000178536 107 ntBASIC4.96□□□□□ -1.62
Lire1P11260 Gm25021-201ENSMUST00000179184 107 ntBASIC4.96□□□□□ -1.62
Lire1P11260 Gm22995-201ENSMUST00000179670 107 ntBASIC4.96□□□□□ -1.62
Lire1P11260 Gm24424-201ENSMUST00000179714 107 ntBASIC4.96□□□□□ -1.62
Lire1P11260 Gm24389-201ENSMUST00000179962 107 ntBASIC4.96□□□□□ -1.62
Lire1P11260 Gm25672-201ENSMUST00000180111 107 ntBASIC4.96□□□□□ -1.62
Lire1P11260 Cox6b2-202ENSMUST00000182048 465 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Lire1P11260 Rps12-ps24-201ENSMUST00000182321 381 ntBASIC4.96□□□□□ -1.62
Lire1P11260 Cox6b2-206ENSMUST00000182738 423 ntTSL 2 BASIC4.96□□□□□ -1.62
Lire1P11260 Gm27022-201ENSMUST00000183225 715 ntTSL 3 BASIC4.96□□□□□ -1.62
Lire1P11260 Gm27733-201ENSMUST00000184803 68 ntBASIC4.96□□□□□ -1.62
Lire1P11260 Gm29163-201ENSMUST00000188029 107 ntBASIC4.96□□□□□ -1.62
Lire1P11260 Gm28061-201ENSMUST00000189085 807 ntBASIC4.96□□□□□ -1.62
Lire1P11260 Gm43236-201ENSMUST00000197414 313 ntTSL 5 BASIC4.96□□□□□ -1.62
Lire1P11260 Gm9245-201ENSMUST00000200528 983 ntBASIC4.96□□□□□ -1.62
Lire1P11260 Gm18861-201ENSMUST00000202509 1186 ntBASIC4.96□□□□□ -1.62
Lire1P11260 1810017P11Rik-201ENSMUST00000202592 558 ntBASIC4.96□□□□□ -1.62
Lire1P11260 Gng12-208ENSMUST00000204511 739 ntTSL 5 BASIC4.96□□□□□ -1.62
Lire1P11260 Gm44132-201ENSMUST00000205142 151 ntBASIC4.96□□□□□ -1.62
Lire1P11260 Gm17984-201ENSMUST00000205286 859 ntBASIC4.96□□□□□ -1.62
Lire1P11260 Gm19880-201ENSMUST00000207731 318 ntBASIC4.96□□□□□ -1.62
Lire1P11260 Gm45075-201ENSMUST00000208426 649 ntTSL 3 BASIC4.96□□□□□ -1.62
Lire1P11260 Gm45608-201ENSMUST00000210948 389 ntBASIC4.96□□□□□ -1.62
Lire1P11260 AC160635.2-201ENSMUST00000216368 734 ntTSL 5 BASIC4.96□□□□□ -1.62
Lire1P11260 AC125041.1-201ENSMUST00000218264 876 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Lire1P11260 Gm19256-201ENSMUST00000218550 231 ntBASIC4.96□□□□□ -1.62
Lire1P11260 Gm19168-201ENSMUST00000218804 1091 ntBASIC4.96□□□□□ -1.62
Lire1P11260 Gm35041-201ENSMUST00000219581 602 ntTSL 3 BASIC4.96□□□□□ -1.62
Lire1P11260 AC114573.1-201ENSMUST00000224120 1210 ntBASIC4.96□□□□□ -1.62
Lire1P11260 AC192088.3-201ENSMUST00000227858 831 ntBASIC4.96□□□□□ -1.62
Lire1P11260 AC155237.2-201ENSMUST00000228487 478 ntBASIC4.96□□□□□ -1.62
Lire1P11260 Cox6b2-201ENSMUST00000063324 553 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Lire1P11260 Olfr955-201ENSMUST00000073946 945 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Lire1P11260 Magea1-201ENSMUST00000078193 1108 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Lire1P11260 Gm25810-201ENSMUST00000082752 108 ntBASIC4.96□□□□□ -1.62
Lire1P11260 Gm23815-201ENSMUST00000083231 107 ntBASIC4.96□□□□□ -1.62
Lire1P11260 Gm23520-201ENSMUST00000093736 107 ntBASIC4.96□□□□□ -1.62
Lire1P11260 Gm37461-201ENSMUST00000193929 3704 ntBASIC4.96□□□□□ -1.62
Lire1P11260 Gm2004-201ENSMUST00000109049 1749 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Lire1P11260 Gm14419-202ENSMUST00000126358 1749 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Lire1P11260 Vmn1r214-202ENSMUST00000227236 3892 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Lire1P11260 Trim12a-201ENSMUST00000070943 1531 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Lire1P11260 AC132852.1-201ENSMUST00000214683 2324 ntBASIC4.96□□□□□ -1.62
Lire1P11260 B130034C11Rik-201ENSMUST00000175717 1401 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Lire1P11260 AC136019.1-201ENSMUST00000226503 1412 ntBASIC4.96□□□□□ -1.62
Lire1P11260 Olfr1383-202ENSMUST00000204706 4168 ntAPPRIS P1 TSL 3 BASIC4.96□□□□□ -1.62
Lire1P11260 Gm4011-201ENSMUST00000174657 2555 ntBASIC4.96□□□□□ -1.62
Lire1P11260 AC167420.1-201ENSMUST00000222999 2121 ntBASIC4.96□□□□□ -1.62
Lire1P11260 AC154227.1-201ENSMUST00000228809 2467 ntBASIC4.96□□□□□ -1.62
Lire1P11260 2700099C18Rik-204ENSMUST00000183133 1333 ntBASIC4.96□□□□□ -1.62
Lire1P11260 Gm43027-201ENSMUST00000202906 3691 ntBASIC4.95□□□□□ -1.62
Lire1P11260 Gm43283-201ENSMUST00000199138 2548 ntBASIC4.95□□□□□ -1.62
Lire1P11260 Fbxw13-201ENSMUST00000061456 1485 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Lire1P11260 Postn-202ENSMUST00000081564 2670 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
Lire1P11260 Pof1b-201ENSMUST00000039887 3886 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Lire1P11260 Zfp931-201ENSMUST00000108923 1372 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Lire1P11260 Gm45093-201ENSMUST00000206859 2463 ntBASIC4.95□□□□□ -1.62
Lire1P11260 Vmn2r39-201ENSMUST00000174388 3577 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Lire1P11260 Pum2-201ENSMUST00000020915 3587 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
Lire1P11260 Igkv4-92-201ENSMUST00000103332 351 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Lire1P11260 Ighv1-4-201ENSMUST00000103493 351 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Lire1P11260 Gm14878-201ENSMUST00000118167 293 ntBASIC4.95□□□□□ -1.62
Lire1P11260 Gm12850-201ENSMUST00000119210 436 ntBASIC4.95□□□□□ -1.62
Lire1P11260 Gm5405-201ENSMUST00000120478 609 ntBASIC4.95□□□□□ -1.62
Lire1P11260 Gm13259-201ENSMUST00000120792 456 ntBASIC4.95□□□□□ -1.62
Lire1P11260 Gm15428-201ENSMUST00000121352 333 ntBASIC4.95□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 102.5 ms