Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Olfr705-202ENSMUST00000213721 3001 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Hmgb3O54879 Olfr799-203ENSMUST00000214182 1694 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Hmgb3O54879 Olfr64-201ENSMUST00000081748 5001 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Hmgb3O54879 Cdh19-201ENSMUST00000094626 3914 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Hmgb3O54879 Gm6205-202ENSMUST00000190001 2515 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Hmgb3O54879 Gm36951-201ENSMUST00000193840 2687 ntBASIC3.66□□□□□ -1.82
Hmgb3O54879 Gm14444-201ENSMUST00000109069 919 ntTSL 2 BASIC3.66□□□□□ -1.82
Hmgb3O54879 Gm13000-201ENSMUST00000120937 496 ntBASIC3.66□□□□□ -1.82
Hmgb3O54879 Gm12005-201ENSMUST00000121451 379 ntBASIC3.66□□□□□ -1.82
Hmgb3O54879 n-R5s45-201ENSMUST00000122592 110 ntBASIC3.66□□□□□ -1.82
Hmgb3O54879 Gm15848-202ENSMUST00000125056 832 ntTSL 3 BASIC3.66□□□□□ -1.82
Hmgb3O54879 Gm12205-201ENSMUST00000133940 575 ntTSL 5 BASIC3.66□□□□□ -1.82
Hmgb3O54879 Gm568-201ENSMUST00000135777 506 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Hmgb3O54879 Gm25553-201ENSMUST00000158076 79 ntBASIC3.66□□□□□ -1.82
Hmgb3O54879 Gm4675-201ENSMUST00000163396 502 ntTSL 3 BASIC3.66□□□□□ -1.82
Hmgb3O54879 Prl5a1-201ENSMUST00000017208 1061 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Hmgb3O54879 V1rd19-201ENSMUST00000173571 1157 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Hmgb3O54879 Gm27255-201ENSMUST00000184303 529 ntTSL 3 BASIC3.66□□□□□ -1.82
Hmgb3O54879 1810064F22Rik-202ENSMUST00000187399 630 ntTSL 3 BASIC3.66□□□□□ -1.82
Hmgb3O54879 1700111N16Rik-201ENSMUST00000188663 1133 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Hmgb3O54879 Gm29552-201ENSMUST00000190548 660 ntBASIC3.66□□□□□ -1.82
Hmgb3O54879 Gm8939-201ENSMUST00000192577 964 ntBASIC3.66□□□□□ -1.82
Hmgb3O54879 Gm43586-201ENSMUST00000195948 310 ntBASIC3.66□□□□□ -1.82
Hmgb3O54879 Gm42824-201ENSMUST00000199361 247 ntBASIC3.66□□□□□ -1.82
Hmgb3O54879 Gm43554-201ENSMUST00000199987 186 ntBASIC3.66□□□□□ -1.82
Hmgb3O54879 Snhg1-205ENSMUST00000205825 495 ntTSL 3 BASIC3.66□□□□□ -1.82
Hmgb3O54879 Gm39197-201ENSMUST00000212069 457 ntBASIC3.66□□□□□ -1.82
Hmgb3O54879 Gm30676-201ENSMUST00000214000 1165 ntTSL 5 BASIC3.66□□□□□ -1.82
Hmgb3O54879 AC140409.4-201ENSMUST00000215757 538 ntBASIC3.66□□□□□ -1.82
Hmgb3O54879 AC166263.1-201ENSMUST00000218586 238 ntBASIC3.66□□□□□ -1.82
Hmgb3O54879 9430078K24Rik-202ENSMUST00000219857 348 ntTSL 3 BASIC3.66□□□□□ -1.82
Hmgb3O54879 Il9-201ENSMUST00000022019 536 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Hmgb3O54879 AC146601.1-201ENSMUST00000227910 905 ntBASIC3.66□□□□□ -1.82
Hmgb3O54879 Apcs-201ENSMUST00000027824 971 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Hmgb3O54879 Gnrhr-201ENSMUST00000031172 1211 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Hmgb3O54879 Olfr1497-201ENSMUST00000061993 945 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Hmgb3O54879 Olfr510-201ENSMUST00000076289 945 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Hmgb3O54879 Rpl27a-ps2-201ENSMUST00000080234 450 ntBASIC3.66□□□□□ -1.82
Hmgb3O54879 Mup3-201ENSMUST00000084531 938 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Hmgb3O54879 Gml2-201ENSMUST00000096399 808 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
Hmgb3O54879 Olfr594-201ENSMUST00000098205 1087 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Hmgb3O54879 Olfr547-201ENSMUST00000098229 936 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Hmgb3O54879 Olfr1317-203ENSMUST00000214801 2578 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Hmgb3O54879 4931408C20Rik-201ENSMUST00000097801 4318 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Hmgb3O54879 Gm45517-201ENSMUST00000209973 2468 ntBASIC3.66□□□□□ -1.82
Hmgb3O54879 Rmi1-202ENSMUST00000224479 4212 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Hmgb3O54879 Vmn1r49-203ENSMUST00000226368 6276 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Hmgb3O54879 Gm15638-201ENSMUST00000128159 2062 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Hmgb3O54879 Gm37742-201ENSMUST00000193263 3979 ntBASIC3.65□□□□□ -1.82
Hmgb3O54879 Olfr1316-202ENSMUST00000213696 4184 ntAPPRIS ALT1 TSL 5 BASIC3.65□□□□□ -1.82
Hmgb3O54879 9630002D21Rik-202ENSMUST00000222033 2345 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
Hmgb3O54879 Gm43200-201ENSMUST00000200385 2161 ntBASIC3.65□□□□□ -1.82
Hmgb3O54879 Olfr1270-204ENSMUST00000215975 4854 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
Hmgb3O54879 Gm37195-201ENSMUST00000192006 3018 ntBASIC3.65□□□□□ -1.83
Hmgb3O54879 Trav15n-1-201ENSMUST00000103590 349 ntAPPRIS ALT2 BASIC3.65□□□□□ -1.83
Hmgb3O54879 Gp6-201ENSMUST00000108590 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
Hmgb3O54879 Prl2c1-202ENSMUST00000110335 852 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
Hmgb3O54879 Defb42-202ENSMUST00000111203 567 ntAPPRIS P1 TSL 3 BASIC3.65□□□□□ -1.83
Hmgb3O54879 Gm8595-201ENSMUST00000118250 630 ntBASIC3.65□□□□□ -1.83
Hmgb3O54879 2210408F21Rik-203ENSMUST00000133510 429 ntTSL 3 BASIC3.65□□□□□ -1.83
Hmgb3O54879 2210408F21Rik-206ENSMUST00000138653 417 ntTSL 5 BASIC3.65□□□□□ -1.83
Hmgb3O54879 Gm12114-201ENSMUST00000147896 656 ntTSL 3 BASIC3.65□□□□□ -1.83
Hmgb3O54879 Nr6a1os-202ENSMUST00000151229 525 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Hmgb3O54879 Gm23046-201ENSMUST00000158369 284 ntBASIC3.65□□□□□ -1.83
Hmgb3O54879 Gas5-209ENSMUST00000159663 346 ntTSL 3 BASIC3.65□□□□□ -1.83
Hmgb3O54879 Gm16545-201ENSMUST00000161968 463 ntBASIC3.65□□□□□ -1.83
Hmgb3O54879 Vmn2r-ps68-201ENSMUST00000173880 861 ntBASIC3.65□□□□□ -1.83
Hmgb3O54879 Gm21991-201ENSMUST00000180006 508 ntBASIC3.65□□□□□ -1.83
Hmgb3O54879 Prl3c1-201ENSMUST00000018066 823 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
Hmgb3O54879 Mir6344-201ENSMUST00000183462 104 ntBASIC3.65□□□□□ -1.83
Hmgb3O54879 Mir7220-201ENSMUST00000183978 60 ntBASIC3.65□□□□□ -1.83
Hmgb3O54879 Ly6c1-203ENSMUST00000185200 540 ntTSL 2 BASIC3.65□□□□□ -1.83
Hmgb3O54879 Trav15d-1-dv6d-1-202ENSMUST00000186370 349 ntAPPRIS ALT2 BASIC3.65□□□□□ -1.83
Hmgb3O54879 Gm37187-201ENSMUST00000193425 341 ntBASIC3.65□□□□□ -1.83
Hmgb3O54879 Gm33093-201ENSMUST00000197751 790 ntTSL 5 BASIC3.65□□□□□ -1.83
Hmgb3O54879 Gm42504-201ENSMUST00000198312 525 ntTSL 3 BASIC3.65□□□□□ -1.83
Hmgb3O54879 C78283-201ENSMUST00000202711 848 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Hmgb3O54879 Gm44402-201ENSMUST00000203677 238 ntBASIC3.65□□□□□ -1.83
Hmgb3O54879 Gm43974-201ENSMUST00000205080 684 ntBASIC3.65□□□□□ -1.83
Hmgb3O54879 Gm44694-201ENSMUST00000205317 1298 ntBASIC3.65□□□□□ -1.83
Hmgb3O54879 Olfr1310-201ENSMUST00000207169 1009 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Hmgb3O54879 Gm44893-201ENSMUST00000207259 443 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Hmgb3O54879 Gm17779-201ENSMUST00000213395 394 ntBASIC3.65□□□□□ -1.83
Hmgb3O54879 Gm39384-201ENSMUST00000213703 743 ntTSL 5 BASIC3.65□□□□□ -1.83
Hmgb3O54879 AC156504.1-201ENSMUST00000214608 157 ntBASIC3.65□□□□□ -1.83
Hmgb3O54879 Gm2099-201ENSMUST00000220979 412 ntBASIC3.65□□□□□ -1.83
Hmgb3O54879 AC080021.1-201ENSMUST00000228104 700 ntBASIC3.65□□□□□ -1.83
Hmgb3O54879 Skint10-202ENSMUST00000068851 493 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Hmgb3O54879 Gm25682-201ENSMUST00000083942 164 ntBASIC3.65□□□□□ -1.83
Hmgb3O54879 Olfr1249-201ENSMUST00000099769 957 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Hmgb3O54879 Grik1-203ENSMUST00000114137 2894 ntTSL 5 BASIC3.65□□□□□ -1.83
Hmgb3O54879 Gprc6a-201ENSMUST00000020062 2856 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.83
Hmgb3O54879 Vmn2r-ps5-201ENSMUST00000175971 2730 ntBASIC3.65□□□□□ -1.83
Hmgb3O54879 Olfr1000-202ENSMUST00000213837 1915 ntAPPRIS P1 TSL 3 BASIC3.65□□□□□ -1.83
Hmgb3O54879 Primpol-201ENSMUST00000040468 3772 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Hmgb3O54879 Olfr113-201ENSMUST00000216181 1671 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Hmgb3O54879 Ecm2-201ENSMUST00000051504 3596 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Hmgb3O54879 Dst-211ENSMUST00000183034 23201 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
Hmgb3O54879 Gm42704-201ENSMUST00000196875 1778 ntBASIC3.64□□□□□ -1.83
Hmgb3O54879 Gm44860-201ENSMUST00000208473 2346 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 66.6 ms