Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm26153-201ENSMUST00000157433 127 ntBASIC4.53□□□□□ -1.68
Trim3Q9R1R2 Gm26355-201ENSMUST00000158220 105 ntBASIC4.53□□□□□ -1.68
Trim3Q9R1R2 Gm26352-201ENSMUST00000158223 125 ntBASIC4.53□□□□□ -1.68
Trim3Q9R1R2 Iltifb-201ENSMUST00000163808 1111 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Trim3Q9R1R2 Gm17081-201ENSMUST00000167363 478 ntBASIC4.53□□□□□ -1.68
Trim3Q9R1R2 Vmn2r-ps121-201ENSMUST00000176230 802 ntBASIC4.53□□□□□ -1.68
Trim3Q9R1R2 Vmn2r-ps10-201ENSMUST00000176836 898 ntBASIC4.53□□□□□ -1.68
Trim3Q9R1R2 Vmn2r-ps8-201ENSMUST00000177088 898 ntBASIC4.53□□□□□ -1.68
Trim3Q9R1R2 Gm5777-201ENSMUST00000177265 448 ntBASIC4.53□□□□□ -1.68
Trim3Q9R1R2 Gm21241-201ENSMUST00000179551 934 ntBASIC4.53□□□□□ -1.68
Trim3Q9R1R2 2310031A07Rik-201ENSMUST00000181212 990 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Trim3Q9R1R2 Gm27036-201ENSMUST00000182465 980 ntBASIC4.53□□□□□ -1.68
Trim3Q9R1R2 Rian-217ENSMUST00000183266 687 ntTSL 3 BASIC4.53□□□□□ -1.68
Trim3Q9R1R2 Gm29582-201ENSMUST00000185667 931 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Trim3Q9R1R2 Gm20838-202ENSMUST00000187712 931 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Trim3Q9R1R2 9130024F11Rik-203ENSMUST00000187858 447 ntTSL 2 BASIC4.53□□□□□ -1.68
Trim3Q9R1R2 1700040F15Rik-201ENSMUST00000188244 931 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Trim3Q9R1R2 Gm21996-201ENSMUST00000188269 931 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Trim3Q9R1R2 Gm21256-202ENSMUST00000188881 932 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Trim3Q9R1R2 Gm21739-202ENSMUST00000188917 933 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Trim3Q9R1R2 Gm28116-201ENSMUST00000189064 387 ntBASIC4.53□□□□□ -1.68
Trim3Q9R1R2 Gm28891-202ENSMUST00000189333 927 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Trim3Q9R1R2 Gm21094-202ENSMUST00000189577 926 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Trim3Q9R1R2 Gm20792-201ENSMUST00000189765 931 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Trim3Q9R1R2 Gm28919-201ENSMUST00000190026 920 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Trim3Q9R1R2 Gm28957-201ENSMUST00000190174 373 ntBASIC4.53□□□□□ -1.68
Trim3Q9R1R2 Gm21861-202ENSMUST00000190806 931 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Trim3Q9R1R2 Gm20819-201ENSMUST00000191091 925 ntBASIC4.53□□□□□ -1.68
Trim3Q9R1R2 Gm20871-201ENSMUST00000191322 931 ntBASIC4.53□□□□□ -1.68
Trim3Q9R1R2 Gm21865-202ENSMUST00000191443 923 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Trim3Q9R1R2 Gm8939-201ENSMUST00000192577 964 ntBASIC4.53□□□□□ -1.68
Trim3Q9R1R2 Gm30737-201ENSMUST00000192683 923 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Trim3Q9R1R2 Gm35134-201ENSMUST00000194086 923 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Trim3Q9R1R2 Gm43304-201ENSMUST00000196803 326 ntBASIC4.53□□□□□ -1.68
Trim3Q9R1R2 Gm20559-201ENSMUST00000201032 433 ntTSL 3 BASIC4.53□□□□□ -1.68
Trim3Q9R1R2 Gm43418-201ENSMUST00000201334 428 ntBASIC4.53□□□□□ -1.68
Trim3Q9R1R2 B130024G19Rik-205ENSMUST00000207952 485 ntTSL 3 BASIC4.53□□□□□ -1.68
Trim3Q9R1R2 Gm19885-201ENSMUST00000212853 343 ntBASIC4.53□□□□□ -1.68
Trim3Q9R1R2 Gm32171-201ENSMUST00000217419 1043 ntTSL 5 BASIC4.53□□□□□ -1.68
Trim3Q9R1R2 AC122508.1-201ENSMUST00000218365 233 ntTSL 5 BASIC4.53□□□□□ -1.68
Trim3Q9R1R2 AC127279.1-201ENSMUST00000220140 637 ntBASIC4.53□□□□□ -1.68
Trim3Q9R1R2 AC132344.1-201ENSMUST00000221289 376 ntTSL 3 BASIC4.53□□□□□ -1.68
Trim3Q9R1R2 AC158525.1-201ENSMUST00000223806 576 ntBASIC4.53□□□□□ -1.68
Trim3Q9R1R2 CT025525.4-201ENSMUST00000227728 277 ntBASIC4.53□□□□□ -1.68
Trim3Q9R1R2 AC125539.2-202ENSMUST00000227983 587 ntBASIC4.53□□□□□ -1.68
Trim3Q9R1R2 AC125539.2-201ENSMUST00000228339 753 ntBASIC4.53□□□□□ -1.68
Trim3Q9R1R2 9230110F15Rik-201ENSMUST00000054175 1135 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Trim3Q9R1R2 Defb35-201ENSMUST00000076786 267 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Trim3Q9R1R2 Mir129-2-201ENSMUST00000083577 90 ntBASIC4.53□□□□□ -1.68
Trim3Q9R1R2 Fam24a-201ENSMUST00000084505 371 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Trim3Q9R1R2 Olfr1297-201ENSMUST00000099612 939 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Trim3Q9R1R2 Gm42559-201ENSMUST00000201811 3532 ntBASIC4.53□□□□□ -1.68
Trim3Q9R1R2 Hnrnpr-207ENSMUST00000148843 21452 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Trim3Q9R1R2 Olfr414-202ENSMUST00000192358 4526 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
Trim3Q9R1R2 6720464F23Rik-201ENSMUST00000193946 3496 ntBASIC4.53□□□□□ -1.68
Trim3Q9R1R2 Rgs5-201ENSMUST00000027997 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Trim3Q9R1R2 AC162938.2-205ENSMUST00000217551 2828 ntBASIC4.53□□□□□ -1.68
Trim3Q9R1R2 Rgsl1-201ENSMUST00000124558 3642 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Trim3Q9R1R2 A930017M01Rik-205ENSMUST00000227721 4167 ntBASIC4.53□□□□□ -1.68
Trim3Q9R1R2 Zfp329-202ENSMUST00000108546 2577 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Trim3Q9R1R2 Vmn2r17-201ENSMUST00000171841 2550 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Trim3Q9R1R2 Btbd35f19-201ENSMUST00000178444 1960 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Trim3Q9R1R2 Btbd35f20-201ENSMUST00000179325 1960 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Trim3Q9R1R2 Amy1-201ENSMUST00000067980 1985 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Trim3Q9R1R2 Gm8267-201ENSMUST00000165003 1751 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.69
Trim3Q9R1R2 Btbd35f13-201ENSMUST00000177912 1701 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Trim3Q9R1R2 Ifit2-201ENSMUST00000102826 3818 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Trim3Q9R1R2 Olfr1026-202ENSMUST00000217615 1538 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Trim3Q9R1R2 Gm43654-201ENSMUST00000200664 3417 ntBASIC4.52□□□□□ -1.69
Trim3Q9R1R2 Olfr351-202ENSMUST00000213676 3426 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Trim3Q9R1R2 Gm33680-202ENSMUST00000219411 3401 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Trim3Q9R1R2 Olfr695-201ENSMUST00000216868 3953 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Trim3Q9R1R2 AC124556.1-201ENSMUST00000218256 1319 ntBASIC4.52□□□□□ -1.69
Trim3Q9R1R2 Olfr211-202ENSMUST00000203700 4880 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
Trim3Q9R1R2 A530064N14Rik-201ENSMUST00000195338 1492 ntBASIC4.52□□□□□ -1.69
Trim3Q9R1R2 Vmn2r-ps128-201ENSMUST00000176367 2570 ntBASIC4.52□□□□□ -1.69
Trim3Q9R1R2 Zfp980-201ENSMUST00000105738 4006 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Trim3Q9R1R2 Gm24578-201ENSMUST00000103970 129 ntBASIC4.52□□□□□ -1.69
Trim3Q9R1R2 Gm24160-201ENSMUST00000104594 126 ntBASIC4.52□□□□□ -1.69
Trim3Q9R1R2 Gm12444-201ENSMUST00000121512 877 ntBASIC4.52□□□□□ -1.69
Trim3Q9R1R2 Gm12854-201ENSMUST00000128518 297 ntBASIC4.52□□□□□ -1.69
Trim3Q9R1R2 Gm12609-201ENSMUST00000129908 610 ntTSL 2 BASIC4.52□□□□□ -1.69
Trim3Q9R1R2 Gm16035-201ENSMUST00000153879 401 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Trim3Q9R1R2 Gm16321-201ENSMUST00000155184 574 ntTSL 3 BASIC4.52□□□□□ -1.69
Trim3Q9R1R2 Mir1946b-201ENSMUST00000157853 133 ntBASIC4.52□□□□□ -1.69
Trim3Q9R1R2 Vmn1r166-201ENSMUST00000164045 921 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Trim3Q9R1R2 Gm8453-201ENSMUST00000167253 921 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Trim3Q9R1R2 Gm4498-201ENSMUST00000168580 921 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Trim3Q9R1R2 Vmn1r118-201ENSMUST00000172322 921 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Trim3Q9R1R2 Vmn1r-ps28-201ENSMUST00000174767 942 ntBASIC4.52□□□□□ -1.69
Trim3Q9R1R2 Mir3062-201ENSMUST00000174986 105 ntBASIC4.52□□□□□ -1.69
Trim3Q9R1R2 Gm8693-201ENSMUST00000178871 921 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Trim3Q9R1R2 Vmn1r138-201ENSMUST00000179206 921 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Trim3Q9R1R2 Vmn1r131-201ENSMUST00000179390 921 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Trim3Q9R1R2 Vmn1r111-201ENSMUST00000179511 921 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Trim3Q9R1R2 Gm9457-201ENSMUST00000180176 372 ntBASIC4.52□□□□□ -1.69
Trim3Q9R1R2 Gm38150-201ENSMUST00000192996 452 ntBASIC4.52□□□□□ -1.69
Trim3Q9R1R2 Gm43344-201ENSMUST00000198723 1229 ntBASIC4.52□□□□□ -1.69
Trim3Q9R1R2 Gm43100-201ENSMUST00000202985 674 ntTSL 5 BASIC4.52□□□□□ -1.69
Trim3Q9R1R2 Gm35216-201ENSMUST00000203777 433 ntTSL 2 BASIC4.52□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 94.2 ms