Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm13209-201ENSMUST00000138492 494 ntTSL 5 BASIC4.43□□□□□ -1.7
Cdc40Q9DC48 Gm14697-201ENSMUST00000147144 648 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Cdc40Q9DC48 Gm3362-201ENSMUST00000148102 466 ntBASIC4.43□□□□□ -1.7
Cdc40Q9DC48 Gm24402-201ENSMUST00000157873 91 ntBASIC4.43□□□□□ -1.7
Cdc40Q9DC48 Gm17191-201ENSMUST00000165200 417 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Cdc40Q9DC48 1700031A10Rik-201ENSMUST00000174380 656 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Cdc40Q9DC48 Gm26683-201ENSMUST00000181737 470 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Cdc40Q9DC48 Hmgn3-205ENSMUST00000187193 855 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
Cdc40Q9DC48 Gm29137-201ENSMUST00000190301 520 ntTSL 5 BASIC4.43□□□□□ -1.7
Cdc40Q9DC48 Il3-201ENSMUST00000019058 629 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Cdc40Q9DC48 Gm37243-201ENSMUST00000193407 595 ntBASIC4.43□□□□□ -1.7
Cdc40Q9DC48 Gm37209-201ENSMUST00000194109 1276 ntBASIC4.43□□□□□ -1.7
Cdc40Q9DC48 Gm37973-201ENSMUST00000195767 1289 ntBASIC4.43□□□□□ -1.7
Cdc40Q9DC48 Gm5288-201ENSMUST00000198323 1119 ntBASIC4.43□□□□□ -1.7
Cdc40Q9DC48 Gm43700-201ENSMUST00000200967 316 ntTSL 5 BASIC4.43□□□□□ -1.7
Cdc40Q9DC48 Gm44952-201ENSMUST00000204443 433 ntBASIC4.43□□□□□ -1.7
Cdc40Q9DC48 Gm44487-201ENSMUST00000205145 325 ntBASIC4.43□□□□□ -1.7
Cdc40Q9DC48 Gm44876-201ENSMUST00000205394 670 ntTSL 3 BASIC4.43□□□□□ -1.7
Cdc40Q9DC48 Olfr200-ps1-201ENSMUST00000207964 874 ntBASIC4.43□□□□□ -1.7
Cdc40Q9DC48 Gm19201-201ENSMUST00000210127 778 ntBASIC4.43□□□□□ -1.7
Cdc40Q9DC48 Gm7128-201ENSMUST00000211639 533 ntBASIC4.43□□□□□ -1.7
Cdc40Q9DC48 Olfr1077-ps1-201ENSMUST00000213225 1212 ntAPPRIS P1 TSL 3 BASIC4.43□□□□□ -1.7
Cdc40Q9DC48 Gm8264-201ENSMUST00000217801 465 ntBASIC4.43□□□□□ -1.7
Cdc40Q9DC48 Gm46191-201ENSMUST00000218899 433 ntBASIC4.43□□□□□ -1.7
Cdc40Q9DC48 Gm8158-201ENSMUST00000219220 465 ntBASIC4.43□□□□□ -1.7
Cdc40Q9DC48 Gm8112-201ENSMUST00000219637 465 ntBASIC4.43□□□□□ -1.7
Cdc40Q9DC48 Gm7045-201ENSMUST00000221466 605 ntBASIC4.43□□□□□ -1.7
Cdc40Q9DC48 Gm19786-201ENSMUST00000222589 580 ntBASIC4.43□□□□□ -1.7
Cdc40Q9DC48 AC133910.1-201ENSMUST00000228128 624 ntBASIC4.43□□□□□ -1.7
Cdc40Q9DC48 Gnrhr-201ENSMUST00000031172 1211 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Cdc40Q9DC48 Olfr670-201ENSMUST00000050482 939 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Cdc40Q9DC48 Olfr1020-201ENSMUST00000055840 1079 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Cdc40Q9DC48 Olfr736-201ENSMUST00000058965 939 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Cdc40Q9DC48 Olfr346-201ENSMUST00000078854 930 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Cdc40Q9DC48 Gm7697-201ENSMUST00000201500 2507 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Cdc40Q9DC48 Gm37115-201ENSMUST00000193750 2849 ntBASIC4.43□□□□□ -1.7
Cdc40Q9DC48 Fbxl17-204ENSMUST00000112840 3667 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Cdc40Q9DC48 Ccnb3-202ENSMUST00000115752 4554 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Cdc40Q9DC48 Zfp280c-201ENSMUST00000072292 4045 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
Cdc40Q9DC48 Dnah7a-201ENSMUST00000094964 12245 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Cdc40Q9DC48 Il13ra2-202ENSMUST00000112827 1536 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Cdc40Q9DC48 AC131743.1-201ENSMUST00000222138 4024 ntBASIC4.42□□□□□ -1.7
Cdc40Q9DC48 AC152414.1-201ENSMUST00000218784 2287 ntTSL 5 BASIC4.42□□□□□ -1.7
Cdc40Q9DC48 Gm22899-201ENSMUST00000104540 131 ntBASIC4.42□□□□□ -1.7
Cdc40Q9DC48 Gm14444-201ENSMUST00000109069 919 ntTSL 2 BASIC4.42□□□□□ -1.7
Cdc40Q9DC48 Gm3020-201ENSMUST00000112801 450 ntTSL 5 BASIC4.42□□□□□ -1.7
Cdc40Q9DC48 Tcea1-ps1-201ENSMUST00000117942 904 ntBASIC4.42□□□□□ -1.7
Cdc40Q9DC48 Gm11584-201ENSMUST00000120636 325 ntBASIC4.42□□□□□ -1.7
Cdc40Q9DC48 Gm16259-201ENSMUST00000145241 553 ntBASIC4.42□□□□□ -1.7
Cdc40Q9DC48 Gm16035-201ENSMUST00000153879 401 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Cdc40Q9DC48 Mir6410-201ENSMUST00000184204 104 ntBASIC4.42□□□□□ -1.7
Cdc40Q9DC48 1700060O08Rik-201ENSMUST00000185390 281 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Cdc40Q9DC48 Gm20954-201ENSMUST00000189078 644 ntBASIC4.42□□□□□ -1.7
Cdc40Q9DC48 Gm43843-201ENSMUST00000202396 1587 ntBASIC4.42□□□□□ -1.7
Cdc40Q9DC48 Gm44296-201ENSMUST00000204689 681 ntTSL 3 BASIC4.42□□□□□ -1.7
Cdc40Q9DC48 Gm44674-201ENSMUST00000206159 415 ntTSL 3 BASIC4.42□□□□□ -1.7
Cdc40Q9DC48 Gm45037-201ENSMUST00000207475 673 ntTSL 5 BASIC4.42□□□□□ -1.7
Cdc40Q9DC48 AC121804.2-201ENSMUST00000222531 316 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Cdc40Q9DC48 Olfr178-201ENSMUST00000058564 960 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Cdc40Q9DC48 Olfr813-201ENSMUST00000064893 933 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Cdc40Q9DC48 Defb26-201ENSMUST00000099205 561 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Cdc40Q9DC48 Ankrd31-201ENSMUST00000207464 5146 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Cdc40Q9DC48 B830012L14Rik-201ENSMUST00000182785 4505 ntTSL 5 BASIC4.42□□□□□ -1.7
Cdc40Q9DC48 Gm42548-201ENSMUST00000202669 3933 ntBASIC4.42□□□□□ -1.7
Cdc40Q9DC48 Lrp1b-201ENSMUST00000052550 16294 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Cdc40Q9DC48 Hnrnpr-207ENSMUST00000148843 21452 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Cdc40Q9DC48 B230206I08Rik-201ENSMUST00000207479 3191 ntBASIC4.41□□□□□ -1.7
Cdc40Q9DC48 Btbd35f13-201ENSMUST00000177912 1701 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Cdc40Q9DC48 March1-211ENSMUST00000178982 4012 ntAPPRIS ALT1 TSL 5 BASIC4.41□□□□□ -1.7
Cdc40Q9DC48 Olfr1382-202ENSMUST00000213152 4236 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Cdc40Q9DC48 4930402F11Rik-204ENSMUST00000208612 1405 ntTSL 5 BASIC4.41□□□□□ -1.7
Cdc40Q9DC48 Gm44624-201ENSMUST00000208700 2278 ntBASIC4.41□□□□□ -1.7
Cdc40Q9DC48 Gm37814-201ENSMUST00000195820 3644 ntBASIC4.41□□□□□ -1.7
Cdc40Q9DC48 Gm13250-201ENSMUST00000117209 753 ntBASIC4.41□□□□□ -1.7
Cdc40Q9DC48 Cnep1r1-202ENSMUST00000117775 728 ntTSL 3 BASIC4.41□□□□□ -1.7
Cdc40Q9DC48 Gm16106-201ENSMUST00000119187 294 ntBASIC4.41□□□□□ -1.7
Cdc40Q9DC48 Vmn1r-ps99-201ENSMUST00000120067 766 ntBASIC4.41□□□□□ -1.7
Cdc40Q9DC48 Olfr1035-ps1-201ENSMUST00000120109 966 ntBASIC4.41□□□□□ -1.7
Cdc40Q9DC48 Gm14619-201ENSMUST00000120480 168 ntBASIC4.41□□□□□ -1.7
Cdc40Q9DC48 Gm15591-201ENSMUST00000138539 627 ntTSL 5 BASIC4.41□□□□□ -1.7
Cdc40Q9DC48 Gm14505-201ENSMUST00000145383 831 ntTSL 3 BASIC4.41□□□□□ -1.7
Cdc40Q9DC48 Gm13173-201ENSMUST00000151703 441 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Cdc40Q9DC48 Mir1947-201ENSMUST00000158235 85 ntBASIC4.41□□□□□ -1.7
Cdc40Q9DC48 4930570N18Rik-201ENSMUST00000159273 332 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Cdc40Q9DC48 Gm16213-201ENSMUST00000160076 639 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Cdc40Q9DC48 D6Ertd474e-203ENSMUST00000160188 683 ntTSL 3 BASIC4.41□□□□□ -1.7
Cdc40Q9DC48 Gm16114-201ENSMUST00000161930 300 ntBASIC4.41□□□□□ -1.7
Cdc40Q9DC48 Gm8614-201ENSMUST00000182528 978 ntBASIC4.41□□□□□ -1.7
Cdc40Q9DC48 Mir6943-201ENSMUST00000185186 66 ntBASIC4.41□□□□□ -1.7
Cdc40Q9DC48 2310030A07Rik-201ENSMUST00000186460 610 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Cdc40Q9DC48 Gm4412-201ENSMUST00000186660 433 ntBASIC4.41□□□□□ -1.7
Cdc40Q9DC48 Gm28974-201ENSMUST00000187893 231 ntBASIC4.41□□□□□ -1.7
Cdc40Q9DC48 Il20-202ENSMUST00000188581 465 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Cdc40Q9DC48 Gm37741-201ENSMUST00000191768 1256 ntBASIC4.41□□□□□ -1.7
Cdc40Q9DC48 1700047N06Rik-201ENSMUST00000194474 920 ntBASIC4.41□□□□□ -1.7
Cdc40Q9DC48 Gm43237-201ENSMUST00000196835 1044 ntBASIC4.41□□□□□ -1.7
Cdc40Q9DC48 Gm42948-201ENSMUST00000199085 578 ntTSL 5 BASIC4.41□□□□□ -1.7
Cdc40Q9DC48 Gm43015-201ENSMUST00000199087 565 ntBASIC4.41□□□□□ -1.7
Cdc40Q9DC48 Igkv12-40-201ENSMUST00000199208 347 ntBASIC4.41□□□□□ -1.7
Cdc40Q9DC48 Gm43136-201ENSMUST00000200403 636 ntBASIC4.41□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 72 ms