Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Gm11484-201ENSMUST00000119808 338 ntBASIC5.65□□□□□ -1.5
Trim13Q9CYB0 Gm15452-201ENSMUST00000119877 240 ntBASIC5.65□□□□□ -1.5
Trim13Q9CYB0 Rhox11-ps1-201ENSMUST00000121945 387 ntBASIC5.65□□□□□ -1.5
Trim13Q9CYB0 5730412P04Rik-201ENSMUST00000147100 1149 ntTSL 5 BASIC5.65□□□□□ -1.5
Trim13Q9CYB0 Sox5os3-202ENSMUST00000154167 765 ntTSL 3 BASIC5.65□□□□□ -1.5
Trim13Q9CYB0 Gm16321-201ENSMUST00000155184 574 ntTSL 3 BASIC5.65□□□□□ -1.5
Trim13Q9CYB0 Gm24910-201ENSMUST00000157289 272 ntBASIC5.65□□□□□ -1.5
Trim13Q9CYB0 4930448H16Rik-201ENSMUST00000159838 580 ntTSL 5 BASIC5.65□□□□□ -1.5
Trim13Q9CYB0 Calml4-202ENSMUST00000163820 699 ntTSL 2 BASIC5.65□□□□□ -1.5
Trim13Q9CYB0 Gm17030-201ENSMUST00000167016 393 ntBASIC5.65□□□□□ -1.5
Trim13Q9CYB0 Speer6-ps1-201ENSMUST00000168736 545 ntBASIC5.65□□□□□ -1.5
Trim13Q9CYB0 Gypc-201ENSMUST00000172434 612 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
Trim13Q9CYB0 Gm23162-201ENSMUST00000175081 121 ntBASIC5.65□□□□□ -1.5
Trim13Q9CYB0 Faiml-201ENSMUST00000178051 785 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Trim13Q9CYB0 Gm5885-201ENSMUST00000178578 648 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Trim13Q9CYB0 Cldn34b4-202ENSMUST00000178974 881 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Trim13Q9CYB0 Gm23550-201ENSMUST00000179003 121 ntBASIC5.65□□□□□ -1.5
Trim13Q9CYB0 Gm25123-201ENSMUST00000179154 121 ntBASIC5.65□□□□□ -1.5
Trim13Q9CYB0 Gm25353-201ENSMUST00000179366 121 ntBASIC5.65□□□□□ -1.5
Trim13Q9CYB0 Gm22992-201ENSMUST00000179496 121 ntBASIC5.65□□□□□ -1.5
Trim13Q9CYB0 Gm25617-201ENSMUST00000179548 133 ntBASIC5.65□□□□□ -1.5
Trim13Q9CYB0 Gm25892-201ENSMUST00000179867 121 ntBASIC5.65□□□□□ -1.5
Trim13Q9CYB0 Gm24092-201ENSMUST00000180257 121 ntBASIC5.65□□□□□ -1.5
Trim13Q9CYB0 Zfp87-202ENSMUST00000181341 480 ntTSL 3 BASIC5.65□□□□□ -1.5
Trim13Q9CYB0 Rian-211ENSMUST00000182737 699 ntTSL 3 BASIC5.65□□□□□ -1.5
Trim13Q9CYB0 Mir6411-201ENSMUST00000183556 108 ntBASIC5.65□□□□□ -1.5
Trim13Q9CYB0 Gm28023-201ENSMUST00000184556 60 ntBASIC5.65□□□□□ -1.5
Trim13Q9CYB0 Gm27640-201ENSMUST00000184580 147 ntBASIC5.65□□□□□ -1.5
Trim13Q9CYB0 Gm27825-201ENSMUST00000184586 60 ntBASIC5.65□□□□□ -1.5
Trim13Q9CYB0 Gm28643-201ENSMUST00000188811 356 ntTSL 5 BASIC5.65□□□□□ -1.5
Trim13Q9CYB0 Gm21094-202ENSMUST00000189577 926 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Trim13Q9CYB0 Gm29551-201ENSMUST00000190913 698 ntBASIC5.65□□□□□ -1.5
Trim13Q9CYB0 Gm37253-201ENSMUST00000195679 562 ntTSL 5 BASIC5.65□□□□□ -1.5
Trim13Q9CYB0 Gm42916-201ENSMUST00000197142 1042 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Trim13Q9CYB0 Tshb-205ENSMUST00000197322 476 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Trim13Q9CYB0 Gm25617-202ENSMUST00000198387 132 ntBASIC5.65□□□□□ -1.5
Trim13Q9CYB0 4930563F08Rik-201ENSMUST00000198640 515 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Trim13Q9CYB0 Gm43825-201ENSMUST00000199650 734 ntBASIC5.65□□□□□ -1.5
Trim13Q9CYB0 Gm43203-201ENSMUST00000200130 558 ntBASIC5.65□□□□□ -1.5
Trim13Q9CYB0 Gm43440-201ENSMUST00000201957 729 ntBASIC5.65□□□□□ -1.5
Trim13Q9CYB0 Gm8999-201ENSMUST00000204951 969 ntBASIC5.65□□□□□ -1.5
Trim13Q9CYB0 CAAA01216754.4-202ENSMUST00000215276 610 ntBASIC5.65□□□□□ -1.5
Trim13Q9CYB0 Gm46146-201ENSMUST00000217483 346 ntBASIC5.65□□□□□ -1.5
Trim13Q9CYB0 Gm35890-201ENSMUST00000221195 564 ntTSL 5 BASIC5.65□□□□□ -1.5
Trim13Q9CYB0 AC164618.3-201ENSMUST00000224863 681 ntBASIC5.65□□□□□ -1.5
Trim13Q9CYB0 AC164618.1-201ENSMUST00000225769 592 ntBASIC5.65□□□□□ -1.5
Trim13Q9CYB0 Art2b-201ENSMUST00000063920 870 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Trim13Q9CYB0 n-R5s41-201ENSMUST00000083025 119 ntBASIC5.65□□□□□ -1.5
Trim13Q9CYB0 Ssxb3-202ENSMUST00000089379 604 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Trim13Q9CYB0 Defb46-201ENSMUST00000095436 174 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Trim13Q9CYB0 Olfr1066-201ENSMUST00000099885 942 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Trim13Q9CYB0 Gm15679-201ENSMUST00000161244 1936 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Trim13Q9CYB0 Lmbrd2-201ENSMUST00000090380 3210 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Trim13Q9CYB0 Pole2-202ENSMUST00000221411 1641 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Trim13Q9CYB0 AC120375.1-201ENSMUST00000227034 3612 ntBASIC5.65□□□□□ -1.51
Trim13Q9CYB0 Catsperg2-201ENSMUST00000061193 3957 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Trim13Q9CYB0 Abcb7-201ENSMUST00000033695 5667 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Trim13Q9CYB0 Trmt10a-206ENSMUST00000162864 4064 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Trim13Q9CYB0 Fam26d-202ENSMUST00000218239 3075 ntBASIC5.65□□□□□ -1.51
Trim13Q9CYB0 Cyp3a16-201ENSMUST00000031633 1730 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Trim13Q9CYB0 Olfr350-203ENSMUST00000215100 2086 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Trim13Q9CYB0 Prdm9-206ENSMUST00000167994 3460 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Trim13Q9CYB0 Olfr1330-203ENSMUST00000106361 1419 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Trim13Q9CYB0 Gm5415-201ENSMUST00000171322 3609 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
Trim13Q9CYB0 Gm28338-202ENSMUST00000186269 1499 ntTSL 5 BASIC5.64□□□□□ -1.51
Trim13Q9CYB0 Gm28668-202ENSMUST00000186549 1499 ntTSL 5 BASIC5.64□□□□□ -1.51
Trim13Q9CYB0 Gm28735-202ENSMUST00000188159 1499 ntTSL 5 BASIC5.64□□□□□ -1.51
Trim13Q9CYB0 Gm29457-201ENSMUST00000188224 1499 ntTSL 5 BASIC5.64□□□□□ -1.51
Trim13Q9CYB0 Gm15713-201ENSMUST00000155900 1546 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Trim13Q9CYB0 Gm18879-201ENSMUST00000221187 1537 ntBASIC5.64□□□□□ -1.51
Trim13Q9CYB0 Hmgn5-201ENSMUST00000033597 1934 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Trim13Q9CYB0 Gm37769-201ENSMUST00000193753 2369 ntBASIC5.64□□□□□ -1.51
Trim13Q9CYB0 Gm17021-202ENSMUST00000214413 2371 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Trim13Q9CYB0 Herc2-202ENSMUST00000164095 15261 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Trim13Q9CYB0 Nlrp1b-204ENSMUST00000108516 4134 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
Trim13Q9CYB0 AC162908.1-201ENSMUST00000219164 4563 ntBASIC5.64□□□□□ -1.51
Trim13Q9CYB0 Rsrc2-203ENSMUST00000111515 4223 ntTSL 5 BASIC5.64□□□□□ -1.51
Trim13Q9CYB0 Gm42702-201ENSMUST00000199515 4217 ntBASIC5.64□□□□□ -1.51
Trim13Q9CYB0 Tcrg-C2-201ENSMUST00000103561 914 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Trim13Q9CYB0 Iglc2-201ENSMUST00000103749 606 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Trim13Q9CYB0 Rnu11-201ENSMUST00000104135 134 ntBASIC5.64□□□□□ -1.51
Trim13Q9CYB0 Gm2178-201ENSMUST00000104927 357 ntBASIC5.64□□□□□ -1.51
Trim13Q9CYB0 Ncald-202ENSMUST00000116445 858 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
Trim13Q9CYB0 Gm15016-201ENSMUST00000117300 720 ntBASIC5.64□□□□□ -1.51
Trim13Q9CYB0 Gm15901-201ENSMUST00000117663 941 ntBASIC5.64□□□□□ -1.51
Trim13Q9CYB0 Gm14733-201ENSMUST00000117680 133 ntBASIC5.64□□□□□ -1.51
Trim13Q9CYB0 Gm11920-201ENSMUST00000118491 563 ntBASIC5.64□□□□□ -1.51
Trim13Q9CYB0 Gm12646-201ENSMUST00000119144 238 ntBASIC5.64□□□□□ -1.51
Trim13Q9CYB0 Gm14046-201ENSMUST00000119389 509 ntBASIC5.64□□□□□ -1.51
Trim13Q9CYB0 Rpl21-ps9-201ENSMUST00000119897 482 ntBASIC5.64□□□□□ -1.51
Trim13Q9CYB0 Gm9085-201ENSMUST00000119994 1072 ntBASIC5.64□□□□□ -1.51
Trim13Q9CYB0 Gm23888-201ENSMUST00000122690 253 ntBASIC5.64□□□□□ -1.51
Trim13Q9CYB0 Eif4e1b-203ENSMUST00000126785 841 ntAPPRIS ALT2 TSL 3 BASIC5.64□□□□□ -1.51
Trim13Q9CYB0 Vmn1r239-ps-201ENSMUST00000127465 960 ntBASIC5.64□□□□□ -1.51
Trim13Q9CYB0 Gm13266-201ENSMUST00000141869 579 ntTSL 2 BASIC5.64□□□□□ -1.51
Trim13Q9CYB0 Gm11418-201ENSMUST00000156193 626 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Trim13Q9CYB0 Gm13773-201ENSMUST00000156693 583 ntTSL 3 BASIC5.64□□□□□ -1.51
Trim13Q9CYB0 Gm23583-201ENSMUST00000158533 289 ntBASIC5.64□□□□□ -1.51
Trim13Q9CYB0 Six3os1-204ENSMUST00000161688 567 ntTSL 3 BASIC5.64□□□□□ -1.51
Trim13Q9CYB0 Gm17511-201ENSMUST00000172206 342 ntBASIC5.64□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 104.8 ms