Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Gm44234-201ENSMUST00000204246 900 ntBASIC4.84□□□□□ -1.63
Cstf1Q99LC2 Gm45839-201ENSMUST00000209884 399 ntTSL 5 BASIC4.84□□□□□ -1.63
Cstf1Q99LC2 Gm45574-201ENSMUST00000210921 331 ntBASIC4.84□□□□□ -1.63
Cstf1Q99LC2 CT025617.1-201ENSMUST00000216487 725 ntTSL 5 BASIC4.84□□□□□ -1.63
Cstf1Q99LC2 Cetn2-201ENSMUST00000033713 1026 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Cstf1Q99LC2 Olfr1153-201ENSMUST00000052300 957 ntBASIC4.84□□□□□ -1.63
Cstf1Q99LC2 Apoo-ps-201ENSMUST00000061241 586 ntBASIC4.84□□□□□ -1.63
Cstf1Q99LC2 Olfr1145-201ENSMUST00000079711 945 ntAPPRIS ALT2 BASIC4.84□□□□□ -1.63
Cstf1Q99LC2 Olfr1145-202ENSMUST00000090707 978 ntAPPRIS P2 BASIC4.84□□□□□ -1.63
Cstf1Q99LC2 Olfr259-201ENSMUST00000099862 939 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Cstf1Q99LC2 Slc6a15-201ENSMUST00000074204 3607 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Cstf1Q99LC2 Sema3a-201ENSMUST00000030714 5930 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Cstf1Q99LC2 Zfp799-201ENSMUST00000179695 5833 ntTSL 3 BASIC4.84□□□□□ -1.63
Cstf1Q99LC2 Ankar-202ENSMUST00000211837 4543 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
Cstf1Q99LC2 Olfr1195-202ENSMUST00000213545 2585 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
Cstf1Q99LC2 Dsc1-202ENSMUST00000224432 4085 ntAPPRIS ALT2 BASIC4.84□□□□□ -1.64
Cstf1Q99LC2 Gm37250-201ENSMUST00000194919 2388 ntBASIC4.84□□□□□ -1.64
Cstf1Q99LC2 Vmn1r185-205ENSMUST00000227461 5318 ntAPPRIS P1 BASIC4.84□□□□□ -1.64
Cstf1Q99LC2 Vmn1r43-204ENSMUST00000226983 12805 ntAPPRIS P1 BASIC4.84□□□□□ -1.64
Cstf1Q99LC2 Olfr690-202ENSMUST00000211006 2048 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.64
Cstf1Q99LC2 Olfr1489-202ENSMUST00000217182 11140 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
Cstf1Q99LC2 Nr1h5-201ENSMUST00000058899 2835 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
Cstf1Q99LC2 Dnase2b-202ENSMUST00000200633 2685 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Cstf1Q99LC2 Abcg2-201ENSMUST00000031822 5717 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Cstf1Q99LC2 4930533I22Rik-201ENSMUST00000176290 2564 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Cstf1Q99LC2 Gm42600-201ENSMUST00000202081 3588 ntBASIC4.83□□□□□ -1.64
Cstf1Q99LC2 Olfr1270-205ENSMUST00000216354 4836 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Cstf1Q99LC2 Pfpl-201ENSMUST00000168148 3918 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Cstf1Q99LC2 Txndc8-201ENSMUST00000102897 620 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Cstf1Q99LC2 Gm15034-201ENSMUST00000120043 349 ntBASIC4.83□□□□□ -1.64
Cstf1Q99LC2 Gm13162-201ENSMUST00000121481 454 ntBASIC4.83□□□□□ -1.64
Cstf1Q99LC2 Gm15227-201ENSMUST00000121844 399 ntBASIC4.83□□□□□ -1.64
Cstf1Q99LC2 n-R5s61-201ENSMUST00000122711 118 ntBASIC4.83□□□□□ -1.64
Cstf1Q99LC2 Gm13662-201ENSMUST00000157059 712 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Cstf1Q99LC2 Gm25923-201ENSMUST00000158312 138 ntBASIC4.83□□□□□ -1.64
Cstf1Q99LC2 Gm17669-201ENSMUST00000163749 465 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Cstf1Q99LC2 Trav14n-1-201ENSMUST00000177578 340 ntAPPRIS ALT2 BASIC4.83□□□□□ -1.64
Cstf1Q99LC2 Il18-202ENSMUST00000180021 702 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
Cstf1Q99LC2 Gm27688-201ENSMUST00000183634 91 ntBASIC4.83□□□□□ -1.64
Cstf1Q99LC2 Prl8a2-201ENSMUST00000018403 939 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
Cstf1Q99LC2 Trav14d-1-202ENSMUST00000187138 340 ntAPPRIS ALT2 BASIC4.83□□□□□ -1.64
Cstf1Q99LC2 1700003C15Rik-202ENSMUST00000188236 710 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Cstf1Q99LC2 Gm18177-201ENSMUST00000188373 404 ntBASIC4.83□□□□□ -1.64
Cstf1Q99LC2 1700006F04Rik-201ENSMUST00000188582 441 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Cstf1Q99LC2 1700031M16Rik-204ENSMUST00000189724 824 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
Cstf1Q99LC2 1700031M16Rik-207ENSMUST00000191513 847 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
Cstf1Q99LC2 Gm38053-201ENSMUST00000193938 160 ntBASIC4.83□□□□□ -1.64
Cstf1Q99LC2 Gm37659-201ENSMUST00000194574 111 ntBASIC4.83□□□□□ -1.64
Cstf1Q99LC2 Obox4-ps32-201ENSMUST00000196512 537 ntBASIC4.83□□□□□ -1.64
Cstf1Q99LC2 Gm38832-201ENSMUST00000205674 400 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Cstf1Q99LC2 Ceacam-ps1-202ENSMUST00000206683 630 ntBASIC4.83□□□□□ -1.64
Cstf1Q99LC2 Selenok-ps8-201ENSMUST00000221926 280 ntBASIC4.83□□□□□ -1.64
Cstf1Q99LC2 AC121599.1-201ENSMUST00000224276 449 ntBASIC4.83□□□□□ -1.64
Cstf1Q99LC2 AC154335.1-201ENSMUST00000224744 395 ntBASIC4.83□□□□□ -1.64
Cstf1Q99LC2 AC098742.1-201ENSMUST00000227945 373 ntBASIC4.83□□□□□ -1.64
Cstf1Q99LC2 Il18-201ENSMUST00000059081 702 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
Cstf1Q99LC2 Olfr832-201ENSMUST00000060601 939 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Cstf1Q99LC2 Vmn1r33-201ENSMUST00000079678 1036 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Cstf1Q99LC2 Spink12-201ENSMUST00000081271 1007 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Cstf1Q99LC2 Olfr834-201ENSMUST00000086492 939 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Cstf1Q99LC2 Ssxb3-202ENSMUST00000089379 604 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Cstf1Q99LC2 Vmn2r42-204ENSMUST00000142934 3694 ntTSL 5 BASIC4.83□□□□□ -1.64
Cstf1Q99LC2 1700061I17Rik-201ENSMUST00000029642 1962 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Cstf1Q99LC2 Gm13582-201ENSMUST00000146034 2655 ntTSL 2 BASIC4.83□□□□□ -1.64
Cstf1Q99LC2 Gm4541-201ENSMUST00000208901 1848 ntBASIC4.83□□□□□ -1.64
Cstf1Q99LC2 Zfp65-201ENSMUST00000073157 3957 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Cstf1Q99LC2 Olfr1191-ps1-201ENSMUST00000120598 4677 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Cstf1Q99LC2 Olfr344-202ENSMUST00000215879 7675 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Cstf1Q99LC2 Meis1-206ENSMUST00000144988 7553 ntTSL 2 BASIC4.83□□□□□ -1.64
Cstf1Q99LC2 Gm18493-201ENSMUST00000192084 1612 ntBASIC4.83□□□□□ -1.64
Cstf1Q99LC2 Ank2-207ENSMUST00000182064 12413 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
Cstf1Q99LC2 Eda2r-201ENSMUST00000037353 4752 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Cstf1Q99LC2 Rbm46-203ENSMUST00000182818 2115 ntTSL 5 BASIC4.82□□□□□ -1.64
Cstf1Q99LC2 Olfr376-203ENSMUST00000170592 3211 ntAPPRIS P3 TSL 2 BASIC4.82□□□□□ -1.64
Cstf1Q99LC2 Lrp1b-208ENSMUST00000167270 10071 ntTSL 5 BASIC4.82□□□□□ -1.64
Cstf1Q99LC2 Casp4-201ENSMUST00000027012 1435 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Cstf1Q99LC2 Olfr133-203ENSMUST00000215078 3130 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Cstf1Q99LC2 Cenpj-201ENSMUST00000065302 4363 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Cstf1Q99LC2 Gm15737-201ENSMUST00000113434 4894 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Cstf1Q99LC2 Traj7-201ENSMUST00000103733 59 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Cstf1Q99LC2 Gm23273-201ENSMUST00000104058 135 ntBASIC4.82□□□□□ -1.64
Cstf1Q99LC2 Gm23481-201ENSMUST00000104173 131 ntBASIC4.82□□□□□ -1.64
Cstf1Q99LC2 Gm23594-201ENSMUST00000104307 134 ntBASIC4.82□□□□□ -1.64
Cstf1Q99LC2 Ppih-202ENSMUST00000106317 613 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Cstf1Q99LC2 Gm13755-201ENSMUST00000118509 305 ntBASIC4.82□□□□□ -1.64
Cstf1Q99LC2 Gm14067-201ENSMUST00000119340 314 ntBASIC4.82□□□□□ -1.64
Cstf1Q99LC2 Gm11866-201ENSMUST00000120209 335 ntBASIC4.82□□□□□ -1.64
Cstf1Q99LC2 Gm13932-201ENSMUST00000120873 610 ntBASIC4.82□□□□□ -1.64
Cstf1Q99LC2 Gm6031-201ENSMUST00000121314 1054 ntBASIC4.82□□□□□ -1.64
Cstf1Q99LC2 Gm13232-201ENSMUST00000121816 632 ntBASIC4.82□□□□□ -1.64
Cstf1Q99LC2 Gm14122-201ENSMUST00000122076 973 ntBASIC4.82□□□□□ -1.64
Cstf1Q99LC2 Gm12711-201ENSMUST00000131249 340 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Cstf1Q99LC2 Gm15534-201ENSMUST00000137642 562 ntBASIC4.82□□□□□ -1.64
Cstf1Q99LC2 Gm11274-201ENSMUST00000146857 481 ntTSL 2 BASIC4.82□□□□□ -1.64
Cstf1Q99LC2 Gm6542-201ENSMUST00000153606 772 ntBASIC4.82□□□□□ -1.64
Cstf1Q99LC2 Gm26350-201ENSMUST00000157531 288 ntBASIC4.82□□□□□ -1.64
Cstf1Q99LC2 AV026068-206ENSMUST00000187461 513 ntTSL 2 BASIC4.82□□□□□ -1.64
Cstf1Q99LC2 Gm37996-201ENSMUST00000191859 367 ntBASIC4.82□□□□□ -1.64
Cstf1Q99LC2 1700047N06Rik-201ENSMUST00000194474 920 ntBASIC4.82□□□□□ -1.64
Cstf1Q99LC2 Gm42991-201ENSMUST00000196468 3837 ntBASIC4.82□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 77.7 ms