Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Olfr459-203ENSMUST00000214976 3770 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
Nup88Q8CEC0 Elavl4-204ENSMUST00000106598 3997 ntAPPRIS ALT1 TSL 5 BASIC5.61□□□□□ -1.51
Nup88Q8CEC0 Zfp62-202ENSMUST00000109197 4029 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Nup88Q8CEC0 Olfr1085-203ENSMUST00000214566 5129 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Nup88Q8CEC0 Gm24469-201ENSMUST00000104487 131 ntBASIC5.61□□□□□ -1.51
Nup88Q8CEC0 Gm14995-201ENSMUST00000117135 391 ntBASIC5.61□□□□□ -1.51
Nup88Q8CEC0 Gm12285-201ENSMUST00000117347 233 ntBASIC5.61□□□□□ -1.51
Nup88Q8CEC0 Gm22343-201ENSMUST00000122648 286 ntBASIC5.61□□□□□ -1.51
Nup88Q8CEC0 Gm15905-201ENSMUST00000137042 298 ntBASIC5.61□□□□□ -1.51
Nup88Q8CEC0 Gm16259-201ENSMUST00000145241 553 ntBASIC5.61□□□□□ -1.51
Nup88Q8CEC0 Gm13582-201ENSMUST00000146034 2655 ntTSL 2 BASIC5.61□□□□□ -1.51
Nup88Q8CEC0 Gm22383-201ENSMUST00000158188 327 ntBASIC5.61□□□□□ -1.51
Nup88Q8CEC0 Gm16285-201ENSMUST00000162999 347 ntBASIC5.61□□□□□ -1.51
Nup88Q8CEC0 Gm8374-201ENSMUST00000163826 672 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Nup88Q8CEC0 Prl3c1-203ENSMUST00000178072 579 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
Nup88Q8CEC0 Gm15128-202ENSMUST00000178833 1350 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Nup88Q8CEC0 Mir6410-201ENSMUST00000184204 104 ntBASIC5.61□□□□□ -1.51
Nup88Q8CEC0 Gm21803-201ENSMUST00000188897 693 ntBASIC5.61□□□□□ -1.51
Nup88Q8CEC0 1700007K09Rik-202ENSMUST00000188899 680 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Nup88Q8CEC0 1700074H08Rik-201ENSMUST00000189831 555 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Nup88Q8CEC0 Gm37241-201ENSMUST00000191736 523 ntBASIC5.61□□□□□ -1.51
Nup88Q8CEC0 Gm8458-201ENSMUST00000196658 819 ntBASIC5.61□□□□□ -1.51
Nup88Q8CEC0 Gm40263-201ENSMUST00000197468 580 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Nup88Q8CEC0 Gm44171-201ENSMUST00000203701 2109 ntBASIC5.61□□□□□ -1.51
Nup88Q8CEC0 4930402F11Rik-204ENSMUST00000208612 1405 ntTSL 5 BASIC5.61□□□□□ -1.51
Nup88Q8CEC0 Olfr916-203ENSMUST00000214093 3685 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
Nup88Q8CEC0 Olfr107-204ENSMUST00000215974 2282 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Nup88Q8CEC0 Olfr1196-202ENSMUST00000216928 4270 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Nup88Q8CEC0 Olfr1133-202ENSMUST00000217368 993 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Nup88Q8CEC0 1700017N19Rik-210ENSMUST00000218464 1597 ntTSL 5 BASIC5.61□□□□□ -1.51
Nup88Q8CEC0 CT030030.1-201ENSMUST00000218809 152 ntBASIC5.61□□□□□ -1.51
Nup88Q8CEC0 AC154828.2-201ENSMUST00000220908 1070 ntBASIC5.61□□□□□ -1.51
Nup88Q8CEC0 Gm46369-201ENSMUST00000221577 401 ntBASIC5.61□□□□□ -1.51
Nup88Q8CEC0 Nlrp4f-204ENSMUST00000221659 3551 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Nup88Q8CEC0 AC125399.1-201ENSMUST00000224236 595 ntBASIC5.61□□□□□ -1.51
Nup88Q8CEC0 Prr11-201ENSMUST00000051395 3824 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Nup88Q8CEC0 Olfr1323-201ENSMUST00000057071 930 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Nup88Q8CEC0 Olfr827-201ENSMUST00000058123 1058 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Nup88Q8CEC0 n-R5s167-201ENSMUST00000083227 121 ntBASIC5.61□□□□□ -1.51
Nup88Q8CEC0 Gm22350-201ENSMUST00000083924 156 ntBASIC5.61□□□□□ -1.51
Nup88Q8CEC0 Zfp738-203ENSMUST00000137496 13215 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Nup88Q8CEC0 Gm44250-201ENSMUST00000203092 4229 ntBASIC5.61□□□□□ -1.51
Nup88Q8CEC0 Pfpl-201ENSMUST00000168148 3918 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Nup88Q8CEC0 Dync2h1-201ENSMUST00000048417 13972 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Nup88Q8CEC0 Vmn2r-ps123-201ENSMUST00000176763 2410 ntBASIC5.6□□□□□ -1.51
Nup88Q8CEC0 Gm43784-201ENSMUST00000202922 2436 ntBASIC5.6□□□□□ -1.51
Nup88Q8CEC0 Gm10436-201ENSMUST00000071580 1883 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Nup88Q8CEC0 Cyp2c40-201ENSMUST00000160476 1803 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Nup88Q8CEC0 Pou2f1-208ENSMUST00000160260 13022 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Nup88Q8CEC0 Muc15-203ENSMUST00000111017 3095 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Nup88Q8CEC0 Olfr570-202ENSMUST00000209778 1423 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Nup88Q8CEC0 AC190403.1-201ENSMUST00000224515 1325 ntBASIC5.6□□□□□ -1.51
Nup88Q8CEC0 Csnka2ip-201ENSMUST00000089279 1336 ntAPPRIS P2 BASIC5.6□□□□□ -1.51
Nup88Q8CEC0 Macrod2-203ENSMUST00000110061 887 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Nup88Q8CEC0 Mrpl24-203ENSMUST00000121048 1234 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Nup88Q8CEC0 Gm15168-201ENSMUST00000121057 316 ntBASIC5.6□□□□□ -1.51
Nup88Q8CEC0 Gm16019-201ENSMUST00000149538 261 ntTSL 5 BASIC5.6□□□□□ -1.51
Nup88Q8CEC0 Gm22601-201ENSMUST00000157595 250 ntBASIC5.6□□□□□ -1.51
Nup88Q8CEC0 Airn-203ENSMUST00000159791 485 ntTSL 3 BASIC5.6□□□□□ -1.51
Nup88Q8CEC0 Vmn1r5-201ENSMUST00000164307 1056 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Nup88Q8CEC0 Prl5a1-201ENSMUST00000017208 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Nup88Q8CEC0 Vmn1r-ps45-201ENSMUST00000174106 955 ntBASIC5.6□□□□□ -1.51
Nup88Q8CEC0 Vmn1r-ps148-201ENSMUST00000176775 455 ntBASIC5.6□□□□□ -1.51
Nup88Q8CEC0 Obox3-ps8-201ENSMUST00000177182 960 ntBASIC5.6□□□□□ -1.51
Nup88Q8CEC0 Gm16430-202ENSMUST00000178145 703 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Nup88Q8CEC0 Gm16405-202ENSMUST00000180150 703 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Nup88Q8CEC0 Gm37830-201ENSMUST00000195282 837 ntTSL 5 BASIC5.6□□□□□ -1.51
Nup88Q8CEC0 Trdv3-201ENSMUST00000198551 309 ntBASIC5.6□□□□□ -1.51
Nup88Q8CEC0 Csn2-209ENSMUST00000199624 890 ntAPPRIS P3 TSL 5 BASIC5.6□□□□□ -1.51
Nup88Q8CEC0 Gstm2-ps1-201ENSMUST00000201478 657 ntBASIC5.6□□□□□ -1.51
Nup88Q8CEC0 Gm6719-201ENSMUST00000202067 335 ntBASIC5.6□□□□□ -1.51
Nup88Q8CEC0 Tas2r146-ps1-201ENSMUST00000203065 934 ntBASIC5.6□□□□□ -1.51
Nup88Q8CEC0 Minpp1-ps-201ENSMUST00000203344 946 ntBASIC5.6□□□□□ -1.51
Nup88Q8CEC0 Gm4714-201ENSMUST00000203395 279 ntBASIC5.6□□□□□ -1.51
Nup88Q8CEC0 Olfr540-ps1-201ENSMUST00000210499 612 ntBASIC5.6□□□□□ -1.51
Nup88Q8CEC0 Gm45701-201ENSMUST00000212049 235 ntBASIC5.6□□□□□ -1.51
Nup88Q8CEC0 Gm4057-201ENSMUST00000221407 368 ntBASIC5.6□□□□□ -1.51
Nup88Q8CEC0 AC134254.4-201ENSMUST00000223086 370 ntBASIC5.6□□□□□ -1.51
Nup88Q8CEC0 AC102542.1-201ENSMUST00000225204 1138 ntBASIC5.6□□□□□ -1.51
Nup88Q8CEC0 Gm5045-201ENSMUST00000027054 810 ntBASIC5.6□□□□□ -1.51
Nup88Q8CEC0 Csn2-201ENSMUST00000082370 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Nup88Q8CEC0 Gm23302-201ENSMUST00000082710 100 ntBASIC5.6□□□□□ -1.51
Nup88Q8CEC0 Fam24a-201ENSMUST00000084505 371 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Nup88Q8CEC0 Olfr344-202ENSMUST00000215879 7675 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Nup88Q8CEC0 Gm37115-201ENSMUST00000193750 2849 ntBASIC5.6□□□□□ -1.51
Nup88Q8CEC0 Gm38253-201ENSMUST00000194058 4678 ntBASIC5.6□□□□□ -1.51
Nup88Q8CEC0 AC149588.1-201ENSMUST00000228274 3745 ntBASIC5.6□□□□□ -1.51
Nup88Q8CEC0 Olfr1016-203ENSMUST00000217410 2738 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
Nup88Q8CEC0 Gm43781-201ENSMUST00000197634 2681 ntBASIC5.6□□□□□ -1.51
Nup88Q8CEC0 Gm37217-201ENSMUST00000194017 3521 ntBASIC5.6□□□□□ -1.51
Nup88Q8CEC0 Abi3bp-202ENSMUST00000096012 4387 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Nup88Q8CEC0 Gm44724-201ENSMUST00000207119 5548 ntTSL 5 BASIC5.59□□□□□ -1.51
Nup88Q8CEC0 Olfr1323-202ENSMUST00000213463 3717 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Nup88Q8CEC0 AC133076.2-201ENSMUST00000227678 3532 ntBASIC5.59□□□□□ -1.51
Nup88Q8CEC0 Gm33680-202ENSMUST00000219411 3401 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Nup88Q8CEC0 4932411N23Rik-201ENSMUST00000081074 3407 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Nup88Q8CEC0 Olfr1302-203ENSMUST00000215244 2729 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
Nup88Q8CEC0 Olfr685-204ENSMUST00000217432 3246 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
Nup88Q8CEC0 Gm23608-201ENSMUST00000104545 128 ntBASIC5.59□□□□□ -1.51
Nup88Q8CEC0 Olfr328-202ENSMUST00000108824 1199 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 82.8 ms