Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Mir6516-201ENSMUST00000196236 110 ntBASIC5.18□□□□□ -1.58
Ubfd1Q78JW9 Gm43659-201ENSMUST00000200894 628 ntBASIC5.18□□□□□ -1.58
Ubfd1Q78JW9 Gm29154-234ENSMUST00000215272 750 ntTSL 5 BASIC5.18□□□□□ -1.58
Ubfd1Q78JW9 3110043J17Rik-201ENSMUST00000219153 760 ntBASIC5.18□□□□□ -1.58
Ubfd1Q78JW9 Gstz1-204ENSMUST00000222222 724 ntAPPRIS ALT1 TSL 2 BASIC5.18□□□□□ -1.58
Ubfd1Q78JW9 AC154257.2-201ENSMUST00000224166 340 ntBASIC5.18□□□□□ -1.58
Ubfd1Q78JW9 AC140210.1-201ENSMUST00000224961 534 ntBASIC5.18□□□□□ -1.58
Ubfd1Q78JW9 CT030238.1-201ENSMUST00000228393 442 ntBASIC5.18□□□□□ -1.58
Ubfd1Q78JW9 Olfr1356-201ENSMUST00000061289 963 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Ubfd1Q78JW9 Vmn1r48-201ENSMUST00000073415 909 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Ubfd1Q78JW9 Spink7-201ENSMUST00000076194 258 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Ubfd1Q78JW9 Gm24706-201ENSMUST00000082806 137 ntBASIC5.18□□□□□ -1.58
Ubfd1Q78JW9 Gm23514-201ENSMUST00000082827 130 ntBASIC5.18□□□□□ -1.58
Ubfd1Q78JW9 Gm22578-201ENSMUST00000083730 107 ntBASIC5.18□□□□□ -1.58
Ubfd1Q78JW9 Gm7676-201ENSMUST00000084055 319 ntBASIC5.18□□□□□ -1.58
Ubfd1Q78JW9 Gm26691-202ENSMUST00000181952 4183 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Ubfd1Q78JW9 Olfr1065-202ENSMUST00000216162 2148 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
Ubfd1Q78JW9 Zfp930-201ENSMUST00000110216 1323 ntTSL 5 BASIC5.18□□□□□ -1.58
Ubfd1Q78JW9 9630002D21Rik-202ENSMUST00000222033 2345 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Ubfd1Q78JW9 A230057D06Rik-201ENSMUST00000208961 3026 ntTSL 5 BASIC5.18□□□□□ -1.58
Ubfd1Q78JW9 AC115910.1-201ENSMUST00000221188 4275 ntBASIC5.17□□□□□ -1.58
Ubfd1Q78JW9 Zfp763-201ENSMUST00000087654 3407 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Ubfd1Q78JW9 Zfp931-201ENSMUST00000108923 1372 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Ubfd1Q78JW9 Olfr390-202ENSMUST00000120081 3604 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
Ubfd1Q78JW9 Rbm46-202ENSMUST00000182637 2058 ntTSL 5 BASIC5.17□□□□□ -1.58
Ubfd1Q78JW9 Btbd35f24-201ENSMUST00000178080 1941 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Ubfd1Q78JW9 Nlrp9c-201ENSMUST00000041845 2631 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Ubfd1Q78JW9 Gabrg2-201ENSMUST00000070725 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Ubfd1Q78JW9 Olfr473-202ENSMUST00000217618 2319 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
Ubfd1Q78JW9 Olfr49-202ENSMUST00000216214 5717 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Ubfd1Q78JW9 Gm43567-201ENSMUST00000197581 1978 ntBASIC5.17□□□□□ -1.58
Ubfd1Q78JW9 Arhgdib-202ENSMUST00000111891 828 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
Ubfd1Q78JW9 Gm15110-201ENSMUST00000117545 881 ntBASIC5.17□□□□□ -1.58
Ubfd1Q78JW9 Gm12162-201ENSMUST00000123422 154 ntTSL 5 BASIC5.17□□□□□ -1.58
Ubfd1Q78JW9 Bloc1s1-202ENSMUST00000131271 475 ntTSL 5 BASIC5.17□□□□□ -1.58
Ubfd1Q78JW9 Gm24241-201ENSMUST00000157787 145 ntBASIC5.17□□□□□ -1.58
Ubfd1Q78JW9 Gm24186-201ENSMUST00000157983 127 ntBASIC5.17□□□□□ -1.58
Ubfd1Q78JW9 Gm23034-201ENSMUST00000158001 147 ntBASIC5.17□□□□□ -1.58
Ubfd1Q78JW9 Olfr180-201ENSMUST00000171656 1154 ntAPPRIS P2 TSL 2 BASIC5.17□□□□□ -1.58
Ubfd1Q78JW9 Vmn2r-ps84-201ENSMUST00000173377 897 ntBASIC5.17□□□□□ -1.58
Ubfd1Q78JW9 Gm18416-201ENSMUST00000175635 1003 ntBASIC5.17□□□□□ -1.58
Ubfd1Q78JW9 Gm8993-201ENSMUST00000182182 983 ntBASIC5.17□□□□□ -1.58
Ubfd1Q78JW9 1810007C17Rik-201ENSMUST00000187665 710 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Ubfd1Q78JW9 Gm4322-201ENSMUST00000191094 336 ntBASIC5.17□□□□□ -1.58
Ubfd1Q78JW9 Gm28902-201ENSMUST00000191531 215 ntTSL 5 BASIC5.17□□□□□ -1.58
Ubfd1Q78JW9 Gm37359-201ENSMUST00000195243 526 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Ubfd1Q78JW9 Cycs-ps2-201ENSMUST00000197114 292 ntBASIC5.17□□□□□ -1.58
Ubfd1Q78JW9 Mir6994-201ENSMUST00000198985 73 ntBASIC5.17□□□□□ -1.58
Ubfd1Q78JW9 Gm44184-201ENSMUST00000204290 132 ntBASIC5.17□□□□□ -1.58
Ubfd1Q78JW9 Gm45507-201ENSMUST00000210611 519 ntTSL 5 BASIC5.17□□□□□ -1.58
Ubfd1Q78JW9 AC152979.4-201ENSMUST00000219893 379 ntBASIC5.17□□□□□ -1.58
Ubfd1Q78JW9 Gm26571-203ENSMUST00000221865 555 ntTSL 2 BASIC5.17□□□□□ -1.58
Ubfd1Q78JW9 1700129C05Rik-201ENSMUST00000022548 1067 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Ubfd1Q78JW9 AC107369.1-201ENSMUST00000227373 860 ntBASIC5.17□□□□□ -1.58
Ubfd1Q78JW9 Vmn1r214-201ENSMUST00000074252 1227 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Ubfd1Q78JW9 Mir465-201ENSMUST00000093563 74 ntBASIC5.17□□□□□ -1.58
Ubfd1Q78JW9 Defb25-201ENSMUST00000099203 293 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Ubfd1Q78JW9 Olfr1087-201ENSMUST00000099877 942 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Ubfd1Q78JW9 Gm28394-201ENSMUST00000186805 1495 ntTSL 5 BASIC5.17□□□□□ -1.58
Ubfd1Q78JW9 Gm28570-201ENSMUST00000188300 1495 ntTSL 5 BASIC5.17□□□□□ -1.58
Ubfd1Q78JW9 Mfn1-202ENSMUST00000118286 2789 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
Ubfd1Q78JW9 Wdr17-209ENSMUST00000150488 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Ubfd1Q78JW9 Nptn-205ENSMUST00000176250 4531 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Ubfd1Q78JW9 Cdh17-201ENSMUST00000029871 3462 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Ubfd1Q78JW9 Gm37101-201ENSMUST00000191656 3660 ntBASIC5.17□□□□□ -1.58
Ubfd1Q78JW9 Gm3896-201ENSMUST00000176020 4094 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Ubfd1Q78JW9 Tmem45a-201ENSMUST00000023435 2701 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Ubfd1Q78JW9 Amy2a5-201ENSMUST00000098673 3715 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Ubfd1Q78JW9 Vmn1r173-203ENSMUST00000227987 9233 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Ubfd1Q78JW9 Gm14569-204ENSMUST00000169499 5181 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Ubfd1Q78JW9 Olfr542-ps1-202ENSMUST00000218525 4039 ntTSL 5 BASIC5.16□□□□□ -1.58
Ubfd1Q78JW9 2310057J18Rik-202ENSMUST00000140558 1445 ntTSL 5 BASIC5.16□□□□□ -1.58
Ubfd1Q78JW9 Lypd6-205ENSMUST00000169232 3499 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Ubfd1Q78JW9 Prrc2c-202ENSMUST00000182149 11289 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
Ubfd1Q78JW9 Agbl2-208ENSMUST00000170320 4507 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
Ubfd1Q78JW9 Zfp951-202ENSMUST00000186219 2904 ntAPPRIS P2 TSL 5 BASIC5.16□□□□□ -1.58
Ubfd1Q78JW9 Traj40-201ENSMUST00000103702 61 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Ubfd1Q78JW9 Gm12636-201ENSMUST00000117395 624 ntBASIC5.16□□□□□ -1.58
Ubfd1Q78JW9 Gm15126-201ENSMUST00000118631 833 ntBASIC5.16□□□□□ -1.58
Ubfd1Q78JW9 Gm11877-201ENSMUST00000118921 852 ntBASIC5.16□□□□□ -1.58
Ubfd1Q78JW9 Gm12748-201ENSMUST00000120763 504 ntBASIC5.16□□□□□ -1.58
Ubfd1Q78JW9 Gm15367-201ENSMUST00000122398 1016 ntBASIC5.16□□□□□ -1.58
Ubfd1Q78JW9 Gm26424-201ENSMUST00000122530 104 ntBASIC5.16□□□□□ -1.58
Ubfd1Q78JW9 n-R5s98-201ENSMUST00000122549 119 ntBASIC5.16□□□□□ -1.58
Ubfd1Q78JW9 n-R5s174-201ENSMUST00000122638 121 ntBASIC5.16□□□□□ -1.58
Ubfd1Q78JW9 Gtsf1-202ENSMUST00000123724 747 ntTSL 5 BASIC5.16□□□□□ -1.58
Ubfd1Q78JW9 Gtsf1-204ENSMUST00000136480 767 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
Ubfd1Q78JW9 4930440I19Rik-201ENSMUST00000144728 992 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Ubfd1Q78JW9 Gm23993-201ENSMUST00000157478 144 ntBASIC5.16□□□□□ -1.58
Ubfd1Q78JW9 Gm22725-201ENSMUST00000158092 110 ntBASIC5.16□□□□□ -1.58
Ubfd1Q78JW9 Vmn1r163-201ENSMUST00000164537 924 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Ubfd1Q78JW9 Gm10662-201ENSMUST00000168053 942 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Ubfd1Q78JW9 Vmn1r128-201ENSMUST00000169165 924 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Ubfd1Q78JW9 Vmn1r135-201ENSMUST00000170931 924 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Ubfd1Q78JW9 Tspy-ps-202ENSMUST00000172304 321 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Ubfd1Q78JW9 Vmn1r14-201ENSMUST00000177435 912 ntAPPRIS P2 BASIC5.16□□□□□ -1.58
Ubfd1Q78JW9 Vmn1r148-201ENSMUST00000177774 924 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Ubfd1Q78JW9 Vmn1r100-201ENSMUST00000177815 924 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Ubfd1Q78JW9 Zfp950-206ENSMUST00000178819 171 ntBASIC5.16□□□□□ -1.58
Ubfd1Q78JW9 Gm5891-201ENSMUST00000179493 942 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 81.7 ms