Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Gm43302-201ENSMUST00000050011 4310 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Scaf4Q6PFF0 Ppp2r3a-201ENSMUST00000066773 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Scaf4Q6PFF0 Olfr1505-203ENSMUST00000216835 3685 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Scaf4Q6PFF0 Il18r1-206ENSMUST00000195684 2850 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Scaf4Q6PFF0 Ccdc144b-203ENSMUST00000200469 2481 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Scaf4Q6PFF0 Mfn1-202ENSMUST00000118286 2789 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
Scaf4Q6PFF0 Muc15-203ENSMUST00000111017 3095 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Scaf4Q6PFF0 Vmn2r88-204ENSMUST00000228139 3227 ntAPPRIS ALT2 BASIC5.7□□□□□ -1.5
Scaf4Q6PFF0 Oog4-202ENSMUST00000073641 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Scaf4Q6PFF0 Rapgef6-201ENSMUST00000094536 3372 ntTSL 5 BASIC5.7□□□□□ -1.5
Scaf4Q6PFF0 Mir804-201ENSMUST00000103251 95 ntBASIC5.7□□□□□ -1.5
Scaf4Q6PFF0 Igkv6-23-201ENSMUST00000103386 369 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Scaf4Q6PFF0 Gm15140-201ENSMUST00000112565 984 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
Scaf4Q6PFF0 Gm7146-201ENSMUST00000116079 739 ntBASIC5.7□□□□□ -1.5
Scaf4Q6PFF0 Gm14756-201ENSMUST00000116395 240 ntBASIC5.7□□□□□ -1.5
Scaf4Q6PFF0 Hspe1-ps5-201ENSMUST00000118080 297 ntBASIC5.7□□□□□ -1.5
Scaf4Q6PFF0 Gm16445-201ENSMUST00000120399 714 ntBASIC5.7□□□□□ -1.5
Scaf4Q6PFF0 Gm5646-201ENSMUST00000120568 714 ntBASIC5.7□□□□□ -1.5
Scaf4Q6PFF0 Gm11609-201ENSMUST00000121926 793 ntBASIC5.7□□□□□ -1.5
Scaf4Q6PFF0 Gm22478-201ENSMUST00000122570 154 ntBASIC5.7□□□□□ -1.5
Scaf4Q6PFF0 4930519F16Rik-202ENSMUST00000127012 685 ntTSL 3 BASIC5.7□□□□□ -1.5
Scaf4Q6PFF0 Gm10057-201ENSMUST00000144098 984 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
Scaf4Q6PFF0 Gm16079-201ENSMUST00000149065 578 ntTSL 3 BASIC5.7□□□□□ -1.5
Scaf4Q6PFF0 Gm25904-201ENSMUST00000158491 143 ntBASIC5.7□□□□□ -1.5
Scaf4Q6PFF0 Gm15647-201ENSMUST00000160178 691 ntTSL 3 BASIC5.7□□□□□ -1.5
Scaf4Q6PFF0 Gm17142-201ENSMUST00000164933 645 ntBASIC5.7□□□□□ -1.5
Scaf4Q6PFF0 Cd200r3-210ENSMUST00000171779 1223 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Scaf4Q6PFF0 Kcnj13-202ENSMUST00000174179 261 ntTSL 5 BASIC5.7□□□□□ -1.5
Scaf4Q6PFF0 Gm24300-201ENSMUST00000177809 109 ntBASIC5.7□□□□□ -1.5
Scaf4Q6PFF0 4921511M17Rik-201ENSMUST00000177994 984 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
Scaf4Q6PFF0 Gm15143-201ENSMUST00000178180 714 ntBASIC5.7□□□□□ -1.5
Scaf4Q6PFF0 Samt1-201ENSMUST00000178342 984 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
Scaf4Q6PFF0 Samt1-202ENSMUST00000178698 834 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Scaf4Q6PFF0 Gm24017-201ENSMUST00000178726 109 ntBASIC5.7□□□□□ -1.5
Scaf4Q6PFF0 Gm6900-201ENSMUST00000178971 342 ntBASIC5.7□□□□□ -1.5
Scaf4Q6PFF0 4921511M17Rik-202ENSMUST00000179369 834 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Scaf4Q6PFF0 Gm23952-201ENSMUST00000179380 109 ntBASIC5.7□□□□□ -1.5
Scaf4Q6PFF0 Gm25284-201ENSMUST00000180345 141 ntBASIC5.7□□□□□ -1.5
Scaf4Q6PFF0 Mdrl-201ENSMUST00000180483 1020 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Scaf4Q6PFF0 4930519F16Rik-206ENSMUST00000183292 800 ntBASIC5.7□□□□□ -1.5
Scaf4Q6PFF0 Mir7093-201ENSMUST00000184195 101 ntBASIC5.7□□□□□ -1.5
Scaf4Q6PFF0 Scgb1b17-201ENSMUST00000187081 417 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Scaf4Q6PFF0 Scgb1b10-201ENSMUST00000187257 417 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Scaf4Q6PFF0 Scgb1b15-201ENSMUST00000189118 417 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Scaf4Q6PFF0 Gm29490-201ENSMUST00000190923 342 ntBASIC5.7□□□□□ -1.5
Scaf4Q6PFF0 Rps27a-ps1-201ENSMUST00000191424 463 ntBASIC5.7□□□□□ -1.5
Scaf4Q6PFF0 Gm38353-201ENSMUST00000192351 617 ntTSL 3 BASIC5.7□□□□□ -1.5
Scaf4Q6PFF0 Mark1-ps1-201ENSMUST00000198516 717 ntBASIC5.7□□□□□ -1.5
Scaf4Q6PFF0 Gm36793-201ENSMUST00000199211 922 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Scaf4Q6PFF0 Gm42896-201ENSMUST00000201249 1113 ntBASIC5.7□□□□□ -1.5
Scaf4Q6PFF0 Gm44254-201ENSMUST00000204184 322 ntBASIC5.7□□□□□ -1.5
Scaf4Q6PFF0 Gm5735-201ENSMUST00000207053 167 ntBASIC5.7□□□□□ -1.5
Scaf4Q6PFF0 Gm34350-201ENSMUST00000208898 481 ntTSL 5 BASIC5.7□□□□□ -1.5
Scaf4Q6PFF0 AC091522.1-201ENSMUST00000213934 850 ntTSL 5 BASIC5.7□□□□□ -1.5
Scaf4Q6PFF0 Noxred1-201ENSMUST00000021423 1101 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Scaf4Q6PFF0 Gm19219-201ENSMUST00000215863 724 ntBASIC5.7□□□□□ -1.5
Scaf4Q6PFF0 Gm18113-201ENSMUST00000220630 303 ntBASIC5.7□□□□□ -1.5
Scaf4Q6PFF0 Zfand4-204ENSMUST00000221069 501 ntTSL 3 BASIC5.7□□□□□ -1.5
Scaf4Q6PFF0 CR974485.1-201ENSMUST00000222408 402 ntBASIC5.7□□□□□ -1.5
Scaf4Q6PFF0 AC165092.4-201ENSMUST00000225025 679 ntBASIC5.7□□□□□ -1.5
Scaf4Q6PFF0 AC102575.1-201ENSMUST00000225348 547 ntBASIC5.7□□□□□ -1.5
Scaf4Q6PFF0 Vmn1r27-202ENSMUST00000226666 2969 ntAPPRIS ALT2 BASIC5.7□□□□□ -1.5
Scaf4Q6PFF0 Gstk1-201ENSMUST00000031897 930 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Scaf4Q6PFF0 Klrc3-201ENSMUST00000071149 715 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Scaf4Q6PFF0 Fxyd3-201ENSMUST00000072331 439 ntTSL 2 BASIC5.7□□□□□ -1.5
Scaf4Q6PFF0 Olfr395-201ENSMUST00000072991 939 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Scaf4Q6PFF0 Olfr313-201ENSMUST00000082220 1074 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Scaf4Q6PFF0 Gm26442-201ENSMUST00000082588 153 ntBASIC5.7□□□□□ -1.5
Scaf4Q6PFF0 Gm25512-201ENSMUST00000083863 107 ntBASIC5.7□□□□□ -1.5
Scaf4Q6PFF0 BC061195-201ENSMUST00000088133 577 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Scaf4Q6PFF0 1700003E24Rik-201ENSMUST00000088134 577 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Scaf4Q6PFF0 Obp1a-201ENSMUST00000088201 757 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Scaf4Q6PFF0 Kif20b-203ENSMUST00000223907 5423 ntAPPRIS ALT2 BASIC5.7□□□□□ -1.5
Scaf4Q6PFF0 Epyc-201ENSMUST00000020094 1723 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Scaf4Q6PFF0 Olfr945-202ENSMUST00000216698 1864 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
Scaf4Q6PFF0 A830019L24Rik-202ENSMUST00000198056 3165 ntTSL 3 BASIC5.7□□□□□ -1.5
Scaf4Q6PFF0 Gm38248-201ENSMUST00000193744 5783 ntBASIC5.7□□□□□ -1.5
Scaf4Q6PFF0 Gm13544-201ENSMUST00000131189 2940 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Scaf4Q6PFF0 Gm43900-201ENSMUST00000204868 2669 ntBASIC5.7□□□□□ -1.5
Scaf4Q6PFF0 Dennd4c-204ENSMUST00000142837 5870 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Scaf4Q6PFF0 Olfr668-202ENSMUST00000215359 3613 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Scaf4Q6PFF0 Akap4-202ENSMUST00000115750 3021 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
Scaf4Q6PFF0 Dach2-204ENSMUST00000113380 2894 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Scaf4Q6PFF0 Nsun6-201ENSMUST00000028034 2897 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
Scaf4Q6PFF0 CT030159.1-201ENSMUST00000221580 2261 ntBASIC5.69□□□□□ -1.5
Scaf4Q6PFF0 Trim12a-201ENSMUST00000070943 1531 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Scaf4Q6PFF0 Slfn4-201ENSMUST00000000208 3958 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Scaf4Q6PFF0 Casp8ap2-205ENSMUST00000178925 6557 ntAPPRIS P2 TSL 5 BASIC5.69□□□□□ -1.5
Scaf4Q6PFF0 Gm43466-201ENSMUST00000197836 5214 ntBASIC5.69□□□□□ -1.5
Scaf4Q6PFF0 AC153912.2-201ENSMUST00000215840 2015 ntBASIC5.69□□□□□ -1.5
Scaf4Q6PFF0 Mapk10-212ENSMUST00000170792 7203 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Scaf4Q6PFF0 Gm37846-201ENSMUST00000191840 3774 ntBASIC5.69□□□□□ -1.5
Scaf4Q6PFF0 AI987944-201ENSMUST00000071804 2671 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
Scaf4Q6PFF0 Gm42728-201ENSMUST00000202644 1552 ntBASIC5.69□□□□□ -1.5
Scaf4Q6PFF0 Lypd6-205ENSMUST00000169232 3499 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Scaf4Q6PFF0 Slc9a9-201ENSMUST00000033463 3468 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Scaf4Q6PFF0 Siae-201ENSMUST00000002007 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Scaf4Q6PFF0 Mir449c-201ENSMUST00000102192 109 ntBASIC5.69□□□□□ -1.5
Scaf4Q6PFF0 Igkv4-90-201ENSMUST00000103334 352 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Scaf4Q6PFF0 Ighv5-16-201ENSMUST00000103458 350 ntAPPRIS ALT2 BASIC5.69□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 103.7 ms