Protein–RNA interactions for Protein: Q6P9L4

Usp49, Ubiquitin carboxyl-terminal hydrolase 49, mousemouse

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp49Q6P9L4 Gm2979-201ENSMUST00000193442 463 ntBASIC5.55□□□□□ -1.52
Usp49Q6P9L4 Gm38163-201ENSMUST00000194112 482 ntTSL 5 BASIC5.55□□□□□ -1.52
Usp49Q6P9L4 Gm37576-201ENSMUST00000194228 372 ntBASIC5.55□□□□□ -1.52
Usp49Q6P9L4 Gm42694-201ENSMUST00000196951 358 ntBASIC5.55□□□□□ -1.52
Usp49Q6P9L4 Gm8891-201ENSMUST00000198546 832 ntBASIC5.55□□□□□ -1.52
Usp49Q6P9L4 Gm32536-201ENSMUST00000205209 445 ntBASIC5.55□□□□□ -1.52
Usp49Q6P9L4 Gm44646-201ENSMUST00000205847 421 ntTSL 2 BASIC5.55□□□□□ -1.52
Usp49Q6P9L4 1700095K22Rik-201ENSMUST00000206808 282 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Usp49Q6P9L4 Sult2a7-202ENSMUST00000209744 792 ntTSL 5 BASIC5.55□□□□□ -1.52
Usp49Q6P9L4 AC142273.1-201ENSMUST00000213723 673 ntBASIC5.55□□□□□ -1.52
Usp49Q6P9L4 Gm16381-201ENSMUST00000220528 503 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Usp49Q6P9L4 Gm4057-201ENSMUST00000221407 368 ntBASIC5.55□□□□□ -1.52
Usp49Q6P9L4 Tmem209-211ENSMUST00000222934 1212 ntTSL 5 BASIC5.55□□□□□ -1.52
Usp49Q6P9L4 Gm2001-201ENSMUST00000223236 503 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Usp49Q6P9L4 AC154239.2-201ENSMUST00000227859 233 ntBASIC5.55□□□□□ -1.52
Usp49Q6P9L4 Olfr68-201ENSMUST00000072513 948 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Usp49Q6P9L4 Gm24871-201ENSMUST00000083099 116 ntBASIC5.55□□□□□ -1.52
Usp49Q6P9L4 n-R5s3-201ENSMUST00000083879 112 ntBASIC5.55□□□□□ -1.52
Usp49Q6P9L4 Rnu5g-201ENSMUST00000093721 116 ntBASIC5.55□□□□□ -1.52
Usp49Q6P9L4 Gm7697-201ENSMUST00000201500 2507 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Usp49Q6P9L4 Vmn2r89-202ENSMUST00000159734 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Usp49Q6P9L4 Olfr828-202ENSMUST00000215380 1689 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
Usp49Q6P9L4 Epha7-203ENSMUST00000108191 6615 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Usp49Q6P9L4 Gm13212-203ENSMUST00000119718 2498 ntTSL 5 BASIC5.55□□□□□ -1.52
Usp49Q6P9L4 Dctn4-201ENSMUST00000025505 3738 ntAPPRIS P2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Usp49Q6P9L4 Gm20667-201ENSMUST00000175674 1930 ntBASIC5.54□□□□□ -1.52
Usp49Q6P9L4 Gm38248-201ENSMUST00000193744 5783 ntBASIC5.54□□□□□ -1.52
Usp49Q6P9L4 Ifit2-201ENSMUST00000102826 3818 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Usp49Q6P9L4 Gm43654-201ENSMUST00000200664 3417 ntBASIC5.54□□□□□ -1.52
Usp49Q6P9L4 AC124556.1-201ENSMUST00000218256 1319 ntBASIC5.54□□□□□ -1.52
Usp49Q6P9L4 Vmn1r57-202ENSMUST00000227798 2409 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Usp49Q6P9L4 Pof1b-201ENSMUST00000039887 3886 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Usp49Q6P9L4 Cyp4a31-201ENSMUST00000030480 2396 ntTSL 2 BASIC5.54□□□□□ -1.52
Usp49Q6P9L4 Gm25647-201ENSMUST00000101832 78 ntBASIC5.54□□□□□ -1.52
Usp49Q6P9L4 Gm25823-201ENSMUST00000101995 78 ntBASIC5.54□□□□□ -1.52
Usp49Q6P9L4 Mir706-201ENSMUST00000102262 84 ntBASIC5.54□□□□□ -1.52
Usp49Q6P9L4 Trav16d-dv11-201ENSMUST00000103606 353 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Usp49Q6P9L4 n-R5s82-201ENSMUST00000104213 109 ntBASIC5.54□□□□□ -1.52
Usp49Q6P9L4 Mup2-202ENSMUST00000107490 761 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
Usp49Q6P9L4 Gm3020-201ENSMUST00000112801 450 ntTSL 5 BASIC5.54□□□□□ -1.52
Usp49Q6P9L4 Gm11387-201ENSMUST00000120266 772 ntBASIC5.54□□□□□ -1.52
Usp49Q6P9L4 Gm14065-201ENSMUST00000120848 585 ntBASIC5.54□□□□□ -1.52
Usp49Q6P9L4 Gm12444-201ENSMUST00000121512 877 ntBASIC5.54□□□□□ -1.52
Usp49Q6P9L4 Gm11656-201ENSMUST00000137462 395 ntTSL 5 BASIC5.54□□□□□ -1.52
Usp49Q6P9L4 4930515L19Rik-201ENSMUST00000152352 769 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Usp49Q6P9L4 Smdt1-202ENSMUST00000159054 294 ntTSL 5 BASIC5.54□□□□□ -1.52
Usp49Q6P9L4 Hsd11b1-203ENSMUST00000160929 1256 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Usp49Q6P9L4 Taf1d-202ENSMUST00000164079 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Usp49Q6P9L4 I0C0044D17Rik-202ENSMUST00000168045 510 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Usp49Q6P9L4 Gm17202-201ENSMUST00000171723 951 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Usp49Q6P9L4 Vmn1r173-201ENSMUST00000174055 942 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Usp49Q6P9L4 Vmn1r-ps58-201ENSMUST00000174460 840 ntBASIC5.54□□□□□ -1.52
Usp49Q6P9L4 Vmn2r-ps118-201ENSMUST00000176785 908 ntBASIC5.54□□□□□ -1.52
Usp49Q6P9L4 Gm24220-201ENSMUST00000177753 79 ntBASIC5.54□□□□□ -1.52
Usp49Q6P9L4 Gm25988-201ENSMUST00000177759 79 ntBASIC5.54□□□□□ -1.52
Usp49Q6P9L4 Gm23471-201ENSMUST00000177886 79 ntBASIC5.54□□□□□ -1.52
Usp49Q6P9L4 Gm26488-201ENSMUST00000178225 79 ntBASIC5.54□□□□□ -1.52
Usp49Q6P9L4 Gm21959-201ENSMUST00000178439 452 ntBASIC5.54□□□□□ -1.52
Usp49Q6P9L4 Gm23449-201ENSMUST00000179208 79 ntBASIC5.54□□□□□ -1.52
Usp49Q6P9L4 Gm25221-201ENSMUST00000180051 79 ntBASIC5.54□□□□□ -1.52
Usp49Q6P9L4 Rps19-ps12-201ENSMUST00000181937 430 ntBASIC5.54□□□□□ -1.52
Usp49Q6P9L4 Mir7031-201ENSMUST00000183860 65 ntBASIC5.54□□□□□ -1.52
Usp49Q6P9L4 Gm18802-201ENSMUST00000186270 888 ntBASIC5.54□□□□□ -1.52
Usp49Q6P9L4 Gm20954-201ENSMUST00000189078 644 ntBASIC5.54□□□□□ -1.52
Usp49Q6P9L4 Gm37241-201ENSMUST00000191736 523 ntBASIC5.54□□□□□ -1.52
Usp49Q6P9L4 Ighv1-21-1-201ENSMUST00000195790 351 ntBASIC5.54□□□□□ -1.52
Usp49Q6P9L4 Gtpbp4-ps7-201ENSMUST00000197059 297 ntBASIC5.54□□□□□ -1.52
Usp49Q6P9L4 Gm5309-201ENSMUST00000197416 677 ntBASIC5.54□□□□□ -1.52
Usp49Q6P9L4 Gm5995-201ENSMUST00000204107 1273 ntBASIC5.54□□□□□ -1.52
Usp49Q6P9L4 Gm18598-201ENSMUST00000207724 597 ntBASIC5.54□□□□□ -1.52
Usp49Q6P9L4 Gm5373-201ENSMUST00000212113 1050 ntBASIC5.54□□□□□ -1.52
Usp49Q6P9L4 Olfr950-ps1-201ENSMUST00000213804 878 ntBASIC5.54□□□□□ -1.52
Usp49Q6P9L4 CT486006.1-201ENSMUST00000216797 227 ntTSL 5 BASIC5.54□□□□□ -1.52
Usp49Q6P9L4 Vmn2r-ps92-201ENSMUST00000220242 388 ntBASIC5.54□□□□□ -1.52
Usp49Q6P9L4 AC167977.2-201ENSMUST00000225676 682 ntBASIC5.54□□□□□ -1.52
Usp49Q6P9L4 Gm15421-201ENSMUST00000051985 443 ntTSL 3 BASIC5.54□□□□□ -1.52
Usp49Q6P9L4 Mup13-201ENSMUST00000072678 925 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
Usp49Q6P9L4 Gm16415-201ENSMUST00000080097 489 ntBASIC5.54□□□□□ -1.52
Usp49Q6P9L4 Mir342-201ENSMUST00000083502 99 ntBASIC5.54□□□□□ -1.52
Usp49Q6P9L4 Olfr894-201ENSMUST00000093866 949 ntAPPRIS P2 BASIC5.54□□□□□ -1.52
Usp49Q6P9L4 Mup15-201ENSMUST00000095049 925 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
Usp49Q6P9L4 Olfr1135-201ENSMUST00000099853 933 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Usp49Q6P9L4 Fap-201ENSMUST00000000402 2187 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
Usp49Q6P9L4 Olfr351-203ENSMUST00000215137 2856 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Usp49Q6P9L4 Olfr620-201ENSMUST00000052152 3157 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Usp49Q6P9L4 Zfp62-202ENSMUST00000109197 4029 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Usp49Q6P9L4 Gm16421-201ENSMUST00000117616 1557 ntBASIC5.54□□□□□ -1.52
Usp49Q6P9L4 Vmn1r71-210ENSMUST00000228561 4747 ntAPPRIS ALT2 BASIC5.54□□□□□ -1.52
Usp49Q6P9L4 Olfr145-201ENSMUST00000086062 6796 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Usp49Q6P9L4 Olfr965-203ENSMUST00000215164 1722 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Usp49Q6P9L4 Zbtb20-204ENSMUST00000114694 26901 ntAPPRIS P3 TSL 5 BASIC5.54□□□□□ -1.52
Usp49Q6P9L4 Rgs7-207ENSMUST00000195324 2209 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
Usp49Q6P9L4 Satl1-201ENSMUST00000026601 2412 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Usp49Q6P9L4 Olfr506-202ENSMUST00000209296 3228 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
Usp49Q6P9L4 Slco1a1-201ENSMUST00000042119 3395 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Usp49Q6P9L4 Olfr1383-202ENSMUST00000204706 4168 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
Usp49Q6P9L4 Olfr1085-203ENSMUST00000214566 5129 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Usp49Q6P9L4 Gm11550-201ENSMUST00000118210 699 ntBASIC5.53□□□□□ -1.52
Usp49Q6P9L4 Gm14082-201ENSMUST00000118582 801 ntBASIC5.53□□□□□ -1.52
Usp49Q6P9L4 Gm11409-201ENSMUST00000118621 403 ntBASIC5.53□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 75.2 ms