Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Piga-201ENSMUST00000033754 3594 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Ccdc88aQ5SNZ0 Usp29-203ENSMUST00000198068 4420 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Ccdc88aQ5SNZ0 Tmem45a-201ENSMUST00000023435 2701 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Ccdc88aQ5SNZ0 Ryr3-204ENSMUST00000134358 14958 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
Ccdc88aQ5SNZ0 AC153964.1-201ENSMUST00000219677 3142 ntBASIC5.3□□□□□ -1.56
Ccdc88aQ5SNZ0 Gm15675-201ENSMUST00000130486 3681 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Ccdc88aQ5SNZ0 Vmn1r71-210ENSMUST00000228561 4747 ntAPPRIS ALT2 BASIC5.3□□□□□ -1.56
Ccdc88aQ5SNZ0 Zscan4a-201ENSMUST00000210573 2279 ntBASIC5.3□□□□□ -1.56
Ccdc88aQ5SNZ0 Gm25169-201ENSMUST00000104190 129 ntBASIC5.3□□□□□ -1.56
Ccdc88aQ5SNZ0 4930519F16Rik-206ENSMUST00000183292 800 ntBASIC5.3□□□□□ -1.56
Ccdc88aQ5SNZ0 Gm37416-201ENSMUST00000193596 318 ntBASIC5.3□□□□□ -1.56
Ccdc88aQ5SNZ0 Gm43151-201ENSMUST00000201093 657 ntTSL 3 BASIC5.3□□□□□ -1.56
Ccdc88aQ5SNZ0 2900060B14Rik-201ENSMUST00000203191 616 ntBASIC5.3□□□□□ -1.56
Ccdc88aQ5SNZ0 Gm45392-201ENSMUST00000210441 214 ntBASIC5.3□□□□□ -1.56
Ccdc88aQ5SNZ0 AC164437.2-201ENSMUST00000228915 797 ntBASIC5.3□□□□□ -1.56
Ccdc88aQ5SNZ0 Olfr612-203ENSMUST00000215663 2473 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Ccdc88aQ5SNZ0 Gm13477-201ENSMUST00000121620 2687 ntBASIC5.3□□□□□ -1.56
Ccdc88aQ5SNZ0 Ms4a7-201ENSMUST00000025574 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Ccdc88aQ5SNZ0 Olfr726-205ENSMUST00000215278 1324 ntAPPRIS P1 TSL 3 BASIC5.29□□□□□ -1.56
Ccdc88aQ5SNZ0 Gm22269-201ENSMUST00000104002 130 ntBASIC5.29□□□□□ -1.56
Ccdc88aQ5SNZ0 Gm12245-201ENSMUST00000117266 357 ntBASIC5.29□□□□□ -1.56
Ccdc88aQ5SNZ0 Klra4-201ENSMUST00000119096 1245 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Ccdc88aQ5SNZ0 Gm14619-201ENSMUST00000120480 168 ntBASIC5.29□□□□□ -1.56
Ccdc88aQ5SNZ0 Gm15263-201ENSMUST00000121556 642 ntBASIC5.29□□□□□ -1.56
Ccdc88aQ5SNZ0 Gm12041-201ENSMUST00000121606 602 ntBASIC5.29□□□□□ -1.56
Ccdc88aQ5SNZ0 Vmn1r113-201ENSMUST00000168794 894 ntTSL 5 BASIC5.29□□□□□ -1.56
Ccdc88aQ5SNZ0 Mir5134-201ENSMUST00000175529 78 ntBASIC5.29□□□□□ -1.56
Ccdc88aQ5SNZ0 Gm10421-203ENSMUST00000190266 781 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Ccdc88aQ5SNZ0 Gm29793-201ENSMUST00000202874 460 ntBASIC5.29□□□□□ -1.56
Ccdc88aQ5SNZ0 4930503L19Rik-202ENSMUST00000211817 913 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Ccdc88aQ5SNZ0 AC156832.3-201ENSMUST00000215591 435 ntBASIC5.29□□□□□ -1.56
Ccdc88aQ5SNZ0 Gm9616-201ENSMUST00000221154 781 ntBASIC5.29□□□□□ -1.56
Ccdc88aQ5SNZ0 AC133283.1-201ENSMUST00000228443 859 ntBASIC5.29□□□□□ -1.56
Ccdc88aQ5SNZ0 Olfr338-202ENSMUST00000091006 921 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Ccdc88aQ5SNZ0 AC115970.1-201ENSMUST00000218910 1758 ntBASIC5.29□□□□□ -1.56
Ccdc88aQ5SNZ0 Mef2c-202ENSMUST00000163888 6277 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Ccdc88aQ5SNZ0 Vmn1r6-205ENSMUST00000227631 7805 ntAPPRIS ALT2 BASIC5.29□□□□□ -1.56
Ccdc88aQ5SNZ0 Zfp607a-203ENSMUST00000205715 4031 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Ccdc88aQ5SNZ0 Slc28a2-203ENSMUST00000110525 3911 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Ccdc88aQ5SNZ0 Gm26753-201ENSMUST00000181938 2731 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Ccdc88aQ5SNZ0 Gm26760-201ENSMUST00000181901 1604 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Ccdc88aQ5SNZ0 AC159188.2-201ENSMUST00000224103 1301 ntBASIC5.29□□□□□ -1.56
Ccdc88aQ5SNZ0 Cd33-203ENSMUST00000205503 5728 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
Ccdc88aQ5SNZ0 Stk31-202ENSMUST00000163954 2988 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
Ccdc88aQ5SNZ0 Mbnl1-214ENSMUST00000193517 5151 ntAPPRIS ALT1 TSL 5 BASIC5.29□□□□□ -1.56
Ccdc88aQ5SNZ0 AC108802.1-201ENSMUST00000219501 3142 ntBASIC5.29□□□□□ -1.56
Ccdc88aQ5SNZ0 Crebrf-201ENSMUST00000062519 7462 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Ccdc88aQ5SNZ0 Igkv11-125-201ENSMUST00000103311 350 ntAPPRIS ALT2 BASIC5.28□□□□□ -1.56
Ccdc88aQ5SNZ0 Gm13985-201ENSMUST00000154409 621 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Ccdc88aQ5SNZ0 1700058P15Rik-201ENSMUST00000159981 413 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Ccdc88aQ5SNZ0 Ighv5-8-201ENSMUST00000166255 278 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Ccdc88aQ5SNZ0 Gm28784-201ENSMUST00000187817 1011 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Ccdc88aQ5SNZ0 Gm2314-201ENSMUST00000200391 586 ntBASIC5.28□□□□□ -1.56
Ccdc88aQ5SNZ0 Gm45226-201ENSMUST00000206602 288 ntBASIC5.28□□□□□ -1.56
Ccdc88aQ5SNZ0 Gm30409-201ENSMUST00000223302 229 ntTSL 3 BASIC5.28□□□□□ -1.56
Ccdc88aQ5SNZ0 Btbd35f3-201ENSMUST00000140300 1943 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Ccdc88aQ5SNZ0 Btbd35f15-201ENSMUST00000186329 1917 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Ccdc88aQ5SNZ0 Olfr1353-203ENSMUST00000205193 1924 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Ccdc88aQ5SNZ0 Rnf128-202ENSMUST00000113027 2641 ntTSL 5 BASIC5.28□□□□□ -1.56
Ccdc88aQ5SNZ0 Btbd35f7-201ENSMUST00000105007 1960 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Ccdc88aQ5SNZ0 Olfr1115-202ENSMUST00000213513 3604 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Ccdc88aQ5SNZ0 Gm37936-201ENSMUST00000194647 1322 ntBASIC5.28□□□□□ -1.56
Ccdc88aQ5SNZ0 Ndst4-205ENSMUST00000174648 4996 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Ccdc88aQ5SNZ0 Gm23709-201ENSMUST00000104364 130 ntBASIC5.28□□□□□ -1.56
Ccdc88aQ5SNZ0 Gm6071-201ENSMUST00000119561 440 ntBASIC5.28□□□□□ -1.56
Ccdc88aQ5SNZ0 Gm24636-201ENSMUST00000158673 288 ntBASIC5.28□□□□□ -1.56
Ccdc88aQ5SNZ0 Gm27773-201ENSMUST00000184087 78 ntBASIC5.28□□□□□ -1.56
Ccdc88aQ5SNZ0 Gm7299-201ENSMUST00000194441 581 ntBASIC5.28□□□□□ -1.56
Ccdc88aQ5SNZ0 Gm42999-201ENSMUST00000198049 786 ntBASIC5.28□□□□□ -1.56
Ccdc88aQ5SNZ0 Hcfc1r1-ps2-201ENSMUST00000199379 339 ntBASIC5.28□□□□□ -1.56
Ccdc88aQ5SNZ0 4922502N22Rik-201ENSMUST00000204038 1149 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Ccdc88aQ5SNZ0 Gm30954-201ENSMUST00000208715 1210 ntTSL 5 BASIC5.28□□□□□ -1.56
Ccdc88aQ5SNZ0 Gm45574-201ENSMUST00000210921 331 ntBASIC5.28□□□□□ -1.56
Ccdc88aQ5SNZ0 Olfr175-ps1-202ENSMUST00000215069 1201 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Ccdc88aQ5SNZ0 AC161256.1-201ENSMUST00000217312 213 ntBASIC5.28□□□□□ -1.56
Ccdc88aQ5SNZ0 Gm19134-201ENSMUST00000221203 487 ntBASIC5.28□□□□□ -1.56
Ccdc88aQ5SNZ0 AC154592.1-201ENSMUST00000225784 574 ntBASIC5.28□□□□□ -1.56
Ccdc88aQ5SNZ0 Olfr175-ps1-201ENSMUST00000079955 1169 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
Ccdc88aQ5SNZ0 Obp1b-201ENSMUST00000088198 797 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Ccdc88aQ5SNZ0 Olfr1037-202ENSMUST00000213333 1610 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Ccdc88aQ5SNZ0 Olfr653-203ENSMUST00000217466 4786 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Ccdc88aQ5SNZ0 Rgs17-202ENSMUST00000064225 8191 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Ccdc88aQ5SNZ0 Olfr235-204ENSMUST00000214613 2217 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
Ccdc88aQ5SNZ0 Ifi208-202ENSMUST00000169857 1767 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Ccdc88aQ5SNZ0 Gm18066-201ENSMUST00000210904 1774 ntBASIC5.28□□□□□ -1.56
Ccdc88aQ5SNZ0 Gm20826-202ENSMUST00000185348 4605 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Ccdc88aQ5SNZ0 Gm45555-201ENSMUST00000210028 2602 ntBASIC5.27□□□□□ -1.57
Ccdc88aQ5SNZ0 Gm10723-201ENSMUST00000195366 6918 ntBASIC5.27□□□□□ -1.57
Ccdc88aQ5SNZ0 4932411N23Rik-201ENSMUST00000081074 3407 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Ccdc88aQ5SNZ0 Abcb11-201ENSMUST00000102709 5025 ntAPPRIS P2 TSL 5 BASIC5.27□□□□□ -1.57
Ccdc88aQ5SNZ0 Zfp780b-204ENSMUST00000206685 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Ccdc88aQ5SNZ0 Ankrd12-201ENSMUST00000038116 8991 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Ccdc88aQ5SNZ0 Ift80-208ENSMUST00000169064 4064 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Ccdc88aQ5SNZ0 Robo2-203ENSMUST00000117785 8124 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Ccdc88aQ5SNZ0 Gm44567-201ENSMUST00000205645 2631 ntBASIC5.27□□□□□ -1.57
Ccdc88aQ5SNZ0 Vmn1r235-201ENSMUST00000060603 1781 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Ccdc88aQ5SNZ0 Gm15414-201ENSMUST00000155217 440 ntTSL 3 BASIC5.27□□□□□ -1.57
Ccdc88aQ5SNZ0 Gm24239-201ENSMUST00000157791 255 ntBASIC5.27□□□□□ -1.57
Ccdc88aQ5SNZ0 Gm18547-201ENSMUST00000192439 811 ntBASIC5.27□□□□□ -1.57
Ccdc88aQ5SNZ0 Gm37501-201ENSMUST00000192830 691 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 93.3 ms