Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Vmn1r77-201ENSMUST00000164446 921 ntAPPRIS P2 BASIC10.94□□□□□ -0.66
Trim41Q5NCC3 Gm21850-201ENSMUST00000179792 359 ntBASIC10.94□□□□□ -0.66
Trim41Q5NCC3 Gm28149-201ENSMUST00000187102 378 ntBASIC10.94□□□□□ -0.66
Trim41Q5NCC3 Gm28768-201ENSMUST00000189034 378 ntBASIC10.94□□□□□ -0.66
Trim41Q5NCC3 Gm44768-201ENSMUST00000205719 393 ntBASIC10.94□□□□□ -0.66
Trim41Q5NCC3 AC116319.2-201ENSMUST00000228159 984 ntBASIC10.94□□□□□ -0.66
Trim41Q5NCC3 Mir133b-201ENSMUST00000083546 119 ntBASIC10.94□□□□□ -0.66
Trim41Q5NCC3 Fam183b-202ENSMUST00000094156 567 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trim41Q5NCC3 AC158537.1-201ENSMUST00000224637 1711 ntBASIC10.94□□□□□ -0.66
Trim41Q5NCC3 Il15ra-213ENSMUST00000135341 1545 ntTSL 3 BASIC10.94□□□□□ -0.66
Trim41Q5NCC3 1700097M23Rik-201ENSMUST00000204079 1522 ntBASIC10.94□□□□□ -0.66
Trim41Q5NCC3 Homer1-203ENSMUST00000080127 3052 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trim41Q5NCC3 2610021A01Rik-201ENSMUST00000163475 4004 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trim41Q5NCC3 Gm44956-201ENSMUST00000208277 2887 ntTSL 5 BASIC10.93□□□□□ -0.66
Trim41Q5NCC3 Fam160a1-201ENSMUST00000094148 4280 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Trim41Q5NCC3 Gm10309-201ENSMUST00000095186 2005 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trim41Q5NCC3 Gm12259-201ENSMUST00000138391 328 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trim41Q5NCC3 Gm11376-201ENSMUST00000144541 231 ntTSL 5 BASIC10.93□□□□□ -0.66
Trim41Q5NCC3 Gm22726-201ENSMUST00000158089 179 ntBASIC10.93□□□□□ -0.66
Trim41Q5NCC3 R3hcc1l-202ENSMUST00000160107 950 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
Trim41Q5NCC3 Gm6632-201ENSMUST00000168425 954 ntBASIC10.93□□□□□ -0.66
Trim41Q5NCC3 Vmn1r-ps51-201ENSMUST00000175667 320 ntBASIC10.93□□□□□ -0.66
Trim41Q5NCC3 Ly6a-204ENSMUST00000187994 955 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trim41Q5NCC3 Gm36971-201ENSMUST00000195244 378 ntTSL 5 BASIC10.93□□□□□ -0.66
Trim41Q5NCC3 Iglc3-201ENSMUST00000200235 452 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Trim41Q5NCC3 Gm9560-201ENSMUST00000205012 1201 ntBASIC10.93□□□□□ -0.66
Trim41Q5NCC3 Cyp2b26-ps-201ENSMUST00000206238 1090 ntBASIC10.93□□□□□ -0.66
Trim41Q5NCC3 AC166358.3-201ENSMUST00000221456 181 ntBASIC10.93□□□□□ -0.66
Trim41Q5NCC3 AC125543.4-201ENSMUST00000223385 117 ntBASIC10.93□□□□□ -0.66
Trim41Q5NCC3 U90926-201ENSMUST00000031356 520 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Trim41Q5NCC3 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Trim41Q5NCC3 Rps15a-ps2-201ENSMUST00000087473 393 ntBASIC10.93□□□□□ -0.66
Trim41Q5NCC3 Abca8b-201ENSMUST00000020948 7423 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trim41Q5NCC3 Ctnna3-202ENSMUST00000105440 3682 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trim41Q5NCC3 Tbp-211ENSMUST00000162505 12794 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trim41Q5NCC3 AC130217.2-201ENSMUST00000224009 2990 ntBASIC10.93□□□□□ -0.66
Trim41Q5NCC3 Soat1-207ENSMUST00000189661 8371 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trim41Q5NCC3 Anks4b-201ENSMUST00000033201 3900 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trim41Q5NCC3 AC131747.2-201ENSMUST00000226121 1895 ntBASIC10.93□□□□□ -0.66
Trim41Q5NCC3 BC003331-204ENSMUST00000097547 2851 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Trim41Q5NCC3 Asap1-206ENSMUST00000175799 4237 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Trim41Q5NCC3 B130006D01Rik-201ENSMUST00000100534 3124 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Trim41Q5NCC3 Cyp4a28-ps-201ENSMUST00000121884 1477 ntBASIC10.93□□□□□ -0.66
Trim41Q5NCC3 Pecam1-204ENSMUST00000106796 3441 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trim41Q5NCC3 Unc13b-215ENSMUST00000207569 14754 ntTSL 5 BASIC10.93□□□□□ -0.66
Trim41Q5NCC3 Gm6337-201ENSMUST00000168088 1758 ntAPPRIS P5 TSL 5 BASIC10.93□□□□□ -0.66
Trim41Q5NCC3 D930016D06Rik-202ENSMUST00000181620 3805 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trim41Q5NCC3 Gm42686-201ENSMUST00000199172 4108 ntBASIC10.92□□□□□ -0.66
Trim41Q5NCC3 Phf6-202ENSMUST00000101587 3639 ntTSL 2 BASIC10.92□□□□□ -0.66
Trim41Q5NCC3 Gm26816-201ENSMUST00000180679 2448 ntTSL 5 BASIC10.92□□□□□ -0.66
Trim41Q5NCC3 Obox4-ps35-201ENSMUST00000173825 680 ntTSL 3 BASIC10.92□□□□□ -0.66
Trim41Q5NCC3 Gm24810-201ENSMUST00000175317 70 ntBASIC10.92□□□□□ -0.66
Trim41Q5NCC3 Mir6337-201ENSMUST00000184194 105 ntBASIC10.92□□□□□ -0.66
Trim41Q5NCC3 Gm29183-201ENSMUST00000188600 790 ntTSL 5 BASIC10.92□□□□□ -0.66
Trim41Q5NCC3 Cyp2b27-ps-201ENSMUST00000205582 1279 ntBASIC10.92□□□□□ -0.66
Trim41Q5NCC3 Ceacam-ps1-202ENSMUST00000206683 630 ntBASIC10.92□□□□□ -0.66
Trim41Q5NCC3 Nat1-202ENSMUST00000212171 1208 ntAPPRIS ALT1 TSL 5 BASIC10.92□□□□□ -0.66
Trim41Q5NCC3 AC154816.1-201ENSMUST00000222688 634 ntTSL 3 BASIC10.92□□□□□ -0.66
Trim41Q5NCC3 Fhl5-201ENSMUST00000029922 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trim41Q5NCC3 Olfr906-201ENSMUST00000045493 936 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Trim41Q5NCC3 Olfr1369-ps1-201ENSMUST00000079050 954 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Trim41Q5NCC3 Unc80-206ENSMUST00000212557 9777 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Trim41Q5NCC3 Olfr655-203ENSMUST00000215538 2012 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Trim41Q5NCC3 Psg16-202ENSMUST00000118367 2282 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trim41Q5NCC3 Olfr303-205ENSMUST00000216409 4106 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Trim41Q5NCC3 Gm44045-201ENSMUST00000204906 2520 ntBASIC10.92□□□□□ -0.66
Trim41Q5NCC3 Olfr874-202ENSMUST00000216982 2632 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Trim41Q5NCC3 Sdr16c6-201ENSMUST00000095151 1834 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Trim41Q5NCC3 Ank3-215ENSMUST00000182269 4411 ntTSL 5 BASIC10.91□□□□□ -0.66
Trim41Q5NCC3 Hao2-201ENSMUST00000029464 2049 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trim41Q5NCC3 Gm20559-202ENSMUST00000201831 2993 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trim41Q5NCC3 Pnpla8-202ENSMUST00000122902 2728 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trim41Q5NCC3 Gm14912-201ENSMUST00000120166 1773 ntBASIC10.91□□□□□ -0.66
Trim41Q5NCC3 Gm43921-201ENSMUST00000204296 1792 ntBASIC10.91□□□□□ -0.66
Trim41Q5NCC3 Nudcd1-206ENSMUST00000227843 5077 ntAPPRIS P2 BASIC10.91□□□□□ -0.66
Trim41Q5NCC3 Cenpc1-201ENSMUST00000031170 3192 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trim41Q5NCC3 Mllt10-202ENSMUST00000114669 3865 ntTSL 5 BASIC10.91□□□□□ -0.66
Trim41Q5NCC3 Gm12891-201ENSMUST00000119358 240 ntBASIC10.91□□□□□ -0.66
Trim41Q5NCC3 Gm16074-201ENSMUST00000119524 444 ntBASIC10.91□□□□□ -0.66
Trim41Q5NCC3 Gm15168-201ENSMUST00000121057 316 ntBASIC10.91□□□□□ -0.66
Trim41Q5NCC3 Gm25427-201ENSMUST00000157605 103 ntBASIC10.91□□□□□ -0.66
Trim41Q5NCC3 Gm26579-201ENSMUST00000181656 918 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trim41Q5NCC3 Gm36159-201ENSMUST00000206737 549 ntTSL 3 BASIC10.91□□□□□ -0.66
Trim41Q5NCC3 AC069561.3-201ENSMUST00000217321 114 ntBASIC10.91□□□□□ -0.66
Trim41Q5NCC3 AC160863.1-201ENSMUST00000218412 317 ntBASIC10.91□□□□□ -0.66
Trim41Q5NCC3 BC048502-201ENSMUST00000065978 718 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trim41Q5NCC3 Gm26225-201ENSMUST00000082508 135 ntBASIC10.91□□□□□ -0.66
Trim41Q5NCC3 Gm43864-201ENSMUST00000204452 4028 ntBASIC10.91□□□□□ -0.66
Trim41Q5NCC3 Gm29194-201ENSMUST00000189250 2167 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trim41Q5NCC3 Gm15475-201ENSMUST00000137673 3757 ntTSL 2 BASIC10.91□□□□□ -0.66
Trim41Q5NCC3 Asb4-201ENSMUST00000043294 3286 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trim41Q5NCC3 Olfr15-202ENSMUST00000214238 6135 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Trim41Q5NCC3 Gm38412-201ENSMUST00000199205 3895 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trim41Q5NCC3 CT025619.1-201ENSMUST00000214294 2331 ntTSL 5 BASIC10.91□□□□□ -0.66
Trim41Q5NCC3 Dram2-201ENSMUST00000029507 1891 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trim41Q5NCC3 Zfp955a-201ENSMUST00000008830 1638 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trim41Q5NCC3 Fbxw22-201ENSMUST00000080626 1835 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trim41Q5NCC3 Pum2-216ENSMUST00000178015 5874 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Trim41Q5NCC3 Gm45843-201ENSMUST00000212317 4597 ntTSL 5 BASIC10.91□□□□□ -0.66
Trim41Q5NCC3 Zfp934-209ENSMUST00000222746 2206 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 92.6 ms