Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Kera-201ENSMUST00000105286 2280 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CiitaP79621 Rnf213-201ENSMUST00000093902 16716 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
CiitaP79621 5730408A14Rik-201ENSMUST00000194955 1824 ntBASIC5.32□□□□□ -1.56
CiitaP79621 Gm4541-201ENSMUST00000208901 1848 ntBASIC5.32□□□□□ -1.56
CiitaP79621 Tfec-201ENSMUST00000031533 1787 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CiitaP79621 Olfr390-204ENSMUST00000215161 3740 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
CiitaP79621 Gm15675-201ENSMUST00000130486 3681 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CiitaP79621 Vmn1r184-206ENSMUST00000228145 5888 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CiitaP79621 2700099C18Rik-204ENSMUST00000183133 1333 ntBASIC5.32□□□□□ -1.56
CiitaP79621 Capn6-201ENSMUST00000087316 3561 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CiitaP79621 AC133076.2-201ENSMUST00000227678 3532 ntBASIC5.32□□□□□ -1.56
CiitaP79621 Gm44027-201ENSMUST00000203419 3480 ntBASIC5.32□□□□□ -1.56
CiitaP79621 Ighv1-36-201ENSMUST00000103513 348 ntAPPRIS ALT2 BASIC5.32□□□□□ -1.56
CiitaP79621 Mup6-201ENSMUST00000107517 926 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
CiitaP79621 Rps11-ps5-201ENSMUST00000117302 472 ntBASIC5.32□□□□□ -1.56
CiitaP79621 Olfr1149-ps1-201ENSMUST00000118232 691 ntBASIC5.32□□□□□ -1.56
CiitaP79621 Gm24854-201ENSMUST00000158025 98 ntBASIC5.32□□□□□ -1.56
CiitaP79621 Gm24949-201ENSMUST00000183609 215 ntBASIC5.32□□□□□ -1.56
CiitaP79621 Gm29277-201ENSMUST00000185226 602 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CiitaP79621 Gm29089-201ENSMUST00000186209 602 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CiitaP79621 Gm9569-201ENSMUST00000187492 787 ntBASIC5.32□□□□□ -1.56
CiitaP79621 Gm18426-201ENSMUST00000191874 973 ntBASIC5.32□□□□□ -1.56
CiitaP79621 Gm36983-201ENSMUST00000192280 1102 ntBASIC5.32□□□□□ -1.56
CiitaP79621 Gm32817-201ENSMUST00000210007 689 ntTSL 5 BASIC5.32□□□□□ -1.56
CiitaP79621 1700014L14Rik-201ENSMUST00000211704 481 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CiitaP79621 AC153532.3-201ENSMUST00000218660 3848 ntBASIC5.32□□□□□ -1.56
CiitaP79621 Olfr1153-201ENSMUST00000052300 957 ntBASIC5.32□□□□□ -1.56
CiitaP79621 Olfr855-201ENSMUST00000061693 992 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CiitaP79621 Gm38243-201ENSMUST00000194737 1567 ntBASIC5.32□□□□□ -1.56
CiitaP79621 Gm37607-201ENSMUST00000194925 2623 ntBASIC5.32□□□□□ -1.56
CiitaP79621 Olfr1300-ps1-201ENSMUST00000208175 2235 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CiitaP79621 Olfr506-202ENSMUST00000209296 3228 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
CiitaP79621 Slc10a2-201ENSMUST00000023835 4152 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CiitaP79621 Vmn1r13-202ENSMUST00000226892 5156 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CiitaP79621 AC131068.3-201ENSMUST00000228438 1456 ntBASIC5.32□□□□□ -1.56
CiitaP79621 Cd33-203ENSMUST00000205503 5728 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
CiitaP79621 Vmn1r173-202ENSMUST00000226233 9416 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CiitaP79621 5430403G16Rik-201ENSMUST00000092720 3341 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
CiitaP79621 Gm14991-201ENSMUST00000119913 598 ntBASIC5.31□□□□□ -1.56
CiitaP79621 Gm7350-201ENSMUST00000120964 636 ntBASIC5.31□□□□□ -1.56
CiitaP79621 Gm12001-201ENSMUST00000121727 913 ntBASIC5.31□□□□□ -1.56
CiitaP79621 Gm11844-201ENSMUST00000129207 459 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CiitaP79621 Gm11264-201ENSMUST00000143755 2969 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CiitaP79621 Gm23318-201ENSMUST00000158000 108 ntBASIC5.31□□□□□ -1.56
CiitaP79621 Gm26034-201ENSMUST00000158154 116 ntBASIC5.31□□□□□ -1.56
CiitaP79621 Mir5112-201ENSMUST00000174897 60 ntBASIC5.31□□□□□ -1.56
CiitaP79621 Gm18415-201ENSMUST00000177464 647 ntBASIC5.31□□□□□ -1.56
CiitaP79621 Gm16434-202ENSMUST00000177712 618 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
CiitaP79621 Gm6676-202ENSMUST00000178376 618 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
CiitaP79621 Gm8356-203ENSMUST00000178896 615 ntTSL 5 BASIC5.31□□□□□ -1.56
CiitaP79621 Gm25019-201ENSMUST00000179732 110 ntBASIC5.31□□□□□ -1.56
CiitaP79621 9330185C12Rik-201ENSMUST00000180837 1009 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CiitaP79621 1700121L03Rik-201ENSMUST00000187796 704 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CiitaP79621 B230110G15Rik-201ENSMUST00000190868 772 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CiitaP79621 Gm37682-201ENSMUST00000191776 522 ntBASIC5.31□□□□□ -1.56
CiitaP79621 Rnu3a-202ENSMUST00000196710 213 ntBASIC5.31□□□□□ -1.56
CiitaP79621 Rps27-206ENSMUST00000197361 329 ntTSL 3 BASIC5.31□□□□□ -1.56
CiitaP79621 Gm44259-201ENSMUST00000204996 298 ntBASIC5.31□□□□□ -1.56
CiitaP79621 Gm45096-201ENSMUST00000205833 427 ntTSL 3 BASIC5.31□□□□□ -1.56
CiitaP79621 Gm31510-202ENSMUST00000206795 239 ntTSL 3 BASIC5.31□□□□□ -1.56
CiitaP79621 Gm45037-201ENSMUST00000207475 673 ntTSL 5 BASIC5.31□□□□□ -1.56
CiitaP79621 Gm45305-201ENSMUST00000209799 815 ntTSL 5 BASIC5.31□□□□□ -1.56
CiitaP79621 Gm7128-201ENSMUST00000211639 533 ntBASIC5.31□□□□□ -1.56
CiitaP79621 Gm18997-201ENSMUST00000216353 822 ntBASIC5.31□□□□□ -1.56
CiitaP79621 Gm18043-201ENSMUST00000216741 739 ntBASIC5.31□□□□□ -1.56
CiitaP79621 Gm19181-201ENSMUST00000218891 940 ntBASIC5.31□□□□□ -1.56
CiitaP79621 AC158803.3-201ENSMUST00000220024 211 ntBASIC5.31□□□□□ -1.56
CiitaP79621 Glipr1l1-201ENSMUST00000073617 896 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CiitaP79621 Rnu3a-201ENSMUST00000083936 214 ntBASIC5.31□□□□□ -1.56
CiitaP79621 Nxf2-203ENSMUST00000113189 2375 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
CiitaP79621 Gm45415-201ENSMUST00000209644 2074 ntBASIC5.31□□□□□ -1.56
CiitaP79621 Clec2e-201ENSMUST00000032258 2099 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CiitaP79621 Gm45555-201ENSMUST00000210028 2602 ntBASIC5.31□□□□□ -1.56
CiitaP79621 Vmn1r171-209ENSMUST00000228228 2863 ntAPPRIS ALT2 BASIC5.31□□□□□ -1.56
CiitaP79621 Olfr736-203ENSMUST00000213755 2338 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
CiitaP79621 Olfr617-203ENSMUST00000216516 3083 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
CiitaP79621 Gulp1-206ENSMUST00000162600 2798 ntTSL 5 BASIC5.31□□□□□ -1.56
CiitaP79621 Dsc1-202ENSMUST00000224432 4085 ntAPPRIS ALT2 BASIC5.31□□□□□ -1.56
CiitaP79621 Vmn1r80-206ENSMUST00000228028 6918 ntBASIC5.31□□□□□ -1.56
CiitaP79621 Cyld-204ENSMUST00000209206 4032 ntTSL 5 BASIC5.31□□□□□ -1.56
CiitaP79621 AC102431.1-201ENSMUST00000223773 1449 ntBASIC5.31□□□□□ -1.56
CiitaP79621 Gm29488-201ENSMUST00000191427 2402 ntBASIC5.31□□□□□ -1.56
CiitaP79621 Grik1-203ENSMUST00000114137 2894 ntTSL 5 BASIC5.3□□□□□ -1.56
CiitaP79621 Samd3-202ENSMUST00000164660 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
CiitaP79621 Srsy-201ENSMUST00000179900 1618 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
CiitaP79621 Samd3-203ENSMUST00000218301 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
CiitaP79621 AC112274.1-201ENSMUST00000218957 4274 ntBASIC5.3□□□□□ -1.56
CiitaP79621 C130079G13Rik-201ENSMUST00000049476 2789 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CiitaP79621 Vmn1r189-202ENSMUST00000227357 3245 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
CiitaP79621 Olfr1290-204ENSMUST00000217611 2729 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
CiitaP79621 Vmn1r35-205ENSMUST00000227961 1789 ntBASIC5.3□□□□□ -1.56
CiitaP79621 Gm43462-201ENSMUST00000200265 3648 ntBASIC5.3□□□□□ -1.56
CiitaP79621 Fam107b-205ENSMUST00000115055 515 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
CiitaP79621 Gm12717-201ENSMUST00000118427 983 ntBASIC5.3□□□□□ -1.56
CiitaP79621 Gm15019-201ENSMUST00000120148 434 ntBASIC5.3□□□□□ -1.56
CiitaP79621 Gm15022-201ENSMUST00000122074 746 ntBASIC5.3□□□□□ -1.56
CiitaP79621 Snora81-201ENSMUST00000157310 178 ntBASIC5.3□□□□□ -1.56
CiitaP79621 Gm28503-201ENSMUST00000185966 147 ntBASIC5.3□□□□□ -1.56
CiitaP79621 4930521E06Rik-201ENSMUST00000186732 905 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CiitaP79621 Gm18150-201ENSMUST00000195341 645 ntBASIC5.3□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms