Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Gm6853-202ENSMUST00000211360 4375 ntTSL 5 BASIC6.91□□□□□ -1.3
Cux1P53564 Macf1-202ENSMUST00000084301 23398 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
Cux1P53564 Gm37212-201ENSMUST00000192582 3650 ntBASIC6.91□□□□□ -1.3
Cux1P53564 Clca4b-201ENSMUST00000098549 2997 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Cux1P53564 Epha7-201ENSMUST00000029964 6746 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
Cux1P53564 AC120375.2-201ENSMUST00000226532 1853 ntBASIC6.91□□□□□ -1.3
Cux1P53564 Stag2-203ENSMUST00000115073 6171 ntTSL 5 BASIC6.91□□□□□ -1.3
Cux1P53564 Gm43011-201ENSMUST00000197897 4433 ntBASIC6.91□□□□□ -1.3
Cux1P53564 Gm3115-201ENSMUST00000166928 1797 ntAPPRIS P5 TSL 5 BASIC6.91□□□□□ -1.3
Cux1P53564 Lpp-203ENSMUST00000115314 14854 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Cux1P53564 Gm14539-201ENSMUST00000117527 174 ntBASIC6.91□□□□□ -1.3
Cux1P53564 Chrna1os-201ENSMUST00000125413 680 ntTSL 3 BASIC6.91□□□□□ -1.3
Cux1P53564 Gm25714-201ENSMUST00000158626 296 ntBASIC6.91□□□□□ -1.3
Cux1P53564 Gm6214-201ENSMUST00000178845 541 ntBASIC6.91□□□□□ -1.3
Cux1P53564 Gm37030-201ENSMUST00000194254 295 ntBASIC6.91□□□□□ -1.3
Cux1P53564 Clec2g-205ENSMUST00000203405 967 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Cux1P53564 Olfr151-201ENSMUST00000211893 1128 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Cux1P53564 AC113031.3-201ENSMUST00000226552 190 ntBASIC6.91□□□□□ -1.3
Cux1P53564 Olfr218-201ENSMUST00000057548 942 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Cux1P53564 Olfr986-201ENSMUST00000062229 1016 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Cux1P53564 Olfr996-201ENSMUST00000077075 1068 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Cux1P53564 4930567H17Rik-201ENSMUST00000092405 840 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Cux1P53564 Gm7173-201ENSMUST00000101410 2832 ntAPPRIS P4 TSL 5 BASIC6.91□□□□□ -1.3
Cux1P53564 Nlrp1b-203ENSMUST00000108515 4131 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
Cux1P53564 Gm43527-201ENSMUST00000198749 3178 ntBASIC6.9□□□□□ -1.3
Cux1P53564 Rgs17-204ENSMUST00000131996 8107 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Cux1P53564 Ifi213-201ENSMUST00000097462 2680 ntAPPRIS P2 TSL 1 (best) BASIC6.9□□□□□ -1.3
Cux1P53564 Gcc2-208ENSMUST00000162860 6400 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.3
Cux1P53564 Stk38l-201ENSMUST00000001675 4550 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Cux1P53564 Vmn1r52-202ENSMUST00000226520 3125 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
Cux1P53564 C920009B18Rik-202ENSMUST00000181223 4535 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Cux1P53564 Btbd35f2-201ENSMUST00000179991 1949 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
Cux1P53564 Ccdc66-201ENSMUST00000050480 2457 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
Cux1P53564 Gm12486-201ENSMUST00000120887 541 ntBASIC6.9□□□□□ -1.31
Cux1P53564 Airn-203ENSMUST00000159791 485 ntTSL 3 BASIC6.9□□□□□ -1.31
Cux1P53564 Gm9245-201ENSMUST00000200528 983 ntBASIC6.9□□□□□ -1.31
Cux1P53564 Gm39302-201ENSMUST00000215184 636 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
Cux1P53564 Gm18891-201ENSMUST00000216734 1087 ntBASIC6.9□□□□□ -1.31
Cux1P53564 1700112M02Rik-201ENSMUST00000221719 348 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
Cux1P53564 Olfr1490-201ENSMUST00000080162 951 ntAPPRIS P2 BASIC6.9□□□□□ -1.31
Cux1P53564 AC153144.1-201ENSMUST00000221759 3139 ntBASIC6.9□□□□□ -1.31
Cux1P53564 Elavl2-208ENSMUST00000107120 4191 ntTSL 5 BASIC6.9□□□□□ -1.31
Cux1P53564 Gm43577-201ENSMUST00000197090 3344 ntBASIC6.9□□□□□ -1.31
Cux1P53564 Olfr1328-202ENSMUST00000215312 5038 ntAPPRIS ALT1 TSL 5 BASIC6.89□□□□□ -1.31
Cux1P53564 Spef2-204ENSMUST00000160236 5313 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
Cux1P53564 Gm2123-201ENSMUST00000221476 2836 ntBASIC6.89□□□□□ -1.31
Cux1P53564 Gm29325-201ENSMUST00000190705 2528 ntBASIC6.89□□□□□ -1.31
Cux1P53564 Trav10-201ENSMUST00000103583 406 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Cux1P53564 Gm24581-201ENSMUST00000103962 133 ntBASIC6.89□□□□□ -1.31
Cux1P53564 Gm10936-201ENSMUST00000105264 252 ntBASIC6.89□□□□□ -1.31
Cux1P53564 Ighv5-8-201ENSMUST00000166255 278 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Cux1P53564 Gm23816-201ENSMUST00000179617 132 ntBASIC6.89□□□□□ -1.31
Cux1P53564 1700128A07Rik-201ENSMUST00000186311 860 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Cux1P53564 CT030242.2-201ENSMUST00000221588 148 ntBASIC6.89□□□□□ -1.31
Cux1P53564 AC154241.1-201ENSMUST00000223952 356 ntBASIC6.89□□□□□ -1.31
Cux1P53564 Hypm-201ENSMUST00000044987 581 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Cux1P53564 Olfr338-202ENSMUST00000091006 921 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Cux1P53564 Zbtb38-212ENSMUST00000152594 7406 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
Cux1P53564 Gm42611-201ENSMUST00000199446 3407 ntBASIC6.89□□□□□ -1.31
Cux1P53564 Arhgef6-201ENSMUST00000033468 4569 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Cux1P53564 Olfr410-203ENSMUST00000214490 5075 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Cux1P53564 Olfr1281-202ENSMUST00000208176 4905 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
Cux1P53564 Kif20b-203ENSMUST00000223907 5423 ntAPPRIS ALT2 BASIC6.89□□□□□ -1.31
Cux1P53564 Gm14849-201ENSMUST00000122293 2846 ntBASIC6.89□□□□□ -1.31
Cux1P53564 Gm37696-201ENSMUST00000194223 3349 ntBASIC6.88□□□□□ -1.31
Cux1P53564 Gm37733-201ENSMUST00000195478 2962 ntBASIC6.88□□□□□ -1.31
Cux1P53564 Olfr2-205ENSMUST00000214105 5798 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
Cux1P53564 Gm14107-201ENSMUST00000117774 330 ntBASIC6.88□□□□□ -1.31
Cux1P53564 Gm5924-201ENSMUST00000132554 871 ntBASIC6.88□□□□□ -1.31
Cux1P53564 Ugt2a2-202ENSMUST00000144144 929 ntTSL 2 BASIC6.88□□□□□ -1.31
Cux1P53564 Gm27695-201ENSMUST00000184301 91 ntBASIC6.88□□□□□ -1.31
Cux1P53564 Gm19124-201ENSMUST00000191041 832 ntBASIC6.88□□□□□ -1.31
Cux1P53564 Ikzf2-209ENSMUST00000191262 1146 ntTSL 5 BASIC6.88□□□□□ -1.31
Cux1P53564 Gm17811-201ENSMUST00000206193 387 ntBASIC6.88□□□□□ -1.31
Cux1P53564 4930470O06Rik-201ENSMUST00000209438 662 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Cux1P53564 AC123534.1-201ENSMUST00000224060 656 ntBASIC6.88□□□□□ -1.31
Cux1P53564 Resp18-201ENSMUST00000039534 748 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Cux1P53564 Olfr875-201ENSMUST00000080634 1004 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Cux1P53564 Nfib-201ENSMUST00000050872 8770 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Cux1P53564 Olfr1043-202ENSMUST00000213886 1675 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
Cux1P53564 Zfp780b-204ENSMUST00000206685 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Cux1P53564 Gm4070-201ENSMUST00000106766 8795 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Cux1P53564 Gvin1-201ENSMUST00000006667 8795 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Cux1P53564 Ankrd12-201ENSMUST00000038116 8991 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
Cux1P53564 Dennd4c-204ENSMUST00000142837 5870 ntAPPRIS P2 TSL 1 (best) BASIC6.88□□□□□ -1.31
Cux1P53564 Gm43209-201ENSMUST00000198949 1588 ntBASIC6.88□□□□□ -1.31
Cux1P53564 Dync2h1-201ENSMUST00000048417 13972 ntAPPRIS P2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Cux1P53564 Igkv14-111-201ENSMUST00000103320 368 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Cux1P53564 Gm5757-201ENSMUST00000117494 528 ntBASIC6.87□□□□□ -1.31
Cux1P53564 Gm8200-201ENSMUST00000122390 222 ntBASIC6.87□□□□□ -1.31
Cux1P53564 Gm15533-201ENSMUST00000126205 465 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Cux1P53564 Gm3191-201ENSMUST00000167139 346 ntBASIC6.87□□□□□ -1.31
Cux1P53564 Gm17546-201ENSMUST00000168960 733 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Cux1P53564 Vmn1r23-201ENSMUST00000175817 997 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Cux1P53564 Gm4832-202ENSMUST00000183295 375 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Cux1P53564 Gm5885-202ENSMUST00000203357 528 ntBASIC6.87□□□□□ -1.31
Cux1P53564 Gm44032-201ENSMUST00000204841 166 ntBASIC6.87□□□□□ -1.31
Cux1P53564 Il2-201ENSMUST00000029275 1144 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Cux1P53564 A730046J19Rik-201ENSMUST00000135687 4707 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Cux1P53564 Vmn1r189-202ENSMUST00000227357 3245 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 80 ms