Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Far2-202ENSMUST00000111607 3395 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Cdx2P43241 Cdh7-209ENSMUST00000172005 3353 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Cdx2P43241 Gm37115-201ENSMUST00000193750 2849 ntBASIC4.45□□□□□ -1.7
Cdx2P43241 Prl-202ENSMUST00000110369 895 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
Cdx2P43241 Gm13321-201ENSMUST00000117101 400 ntBASIC4.45□□□□□ -1.7
Cdx2P43241 Gm16180-201ENSMUST00000128662 312 ntTSL 3 BASIC4.45□□□□□ -1.7
Cdx2P43241 Gm12259-201ENSMUST00000138391 328 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Cdx2P43241 Gm14637-201ENSMUST00000156516 444 ntTSL 2 BASIC4.45□□□□□ -1.7
Cdx2P43241 Gm25224-201ENSMUST00000158195 68 ntBASIC4.45□□□□□ -1.7
Cdx2P43241 Gm17133-201ENSMUST00000170636 289 ntTSL 3 BASIC4.45□□□□□ -1.7
Cdx2P43241 Gm29538-201ENSMUST00000190783 471 ntTSL 2 BASIC4.45□□□□□ -1.7
Cdx2P43241 Gm42991-201ENSMUST00000196468 3837 ntBASIC4.45□□□□□ -1.7
Cdx2P43241 Gm45004-201ENSMUST00000205302 465 ntTSL 2 BASIC4.45□□□□□ -1.7
Cdx2P43241 Olfr529-ps1-201ENSMUST00000211097 928 ntBASIC4.45□□□□□ -1.7
Cdx2P43241 Gm19170-201ENSMUST00000212440 1084 ntBASIC4.45□□□□□ -1.7
Cdx2P43241 AC171206.1-201ENSMUST00000213612 213 ntBASIC4.45□□□□□ -1.7
Cdx2P43241 Calml4-203ENSMUST00000213643 710 ntTSL 2 BASIC4.45□□□□□ -1.7
Cdx2P43241 1700054O05Rik-201ENSMUST00000214107 555 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Cdx2P43241 9430031K09Rik-201ENSMUST00000222913 925 ntBASIC4.45□□□□□ -1.7
Cdx2P43241 AL589742.1-201ENSMUST00000226034 349 ntBASIC4.45□□□□□ -1.7
Cdx2P43241 AC156790.5-201ENSMUST00000227075 231 ntBASIC4.45□□□□□ -1.7
Cdx2P43241 Gm5689-201ENSMUST00000041389 294 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Cdx2P43241 Capza3-201ENSMUST00000043797 1222 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Cdx2P43241 Olfr1166-201ENSMUST00000099833 1628 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Cdx2P43241 Klhl28-203ENSMUST00000222508 6459 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Cdx2P43241 D030025E07Rik-203ENSMUST00000197413 2346 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Cdx2P43241 Gm37749-201ENSMUST00000193917 1899 ntBASIC4.45□□□□□ -1.7
Cdx2P43241 Vmn1r43-204ENSMUST00000226983 12805 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Cdx2P43241 AC149588.1-201ENSMUST00000228274 3745 ntBASIC4.45□□□□□ -1.7
Cdx2P43241 Fbxl13-202ENSMUST00000115234 2143 ntTSL 5 BASIC4.45□□□□□ -1.7
Cdx2P43241 Olfr1191-ps1-201ENSMUST00000120598 4677 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Cdx2P43241 Vmn1r71-204ENSMUST00000227702 5034 ntAPPRIS P2 BASIC4.45□□□□□ -1.7
Cdx2P43241 Gm38407-202ENSMUST00000219221 2391 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Cdx2P43241 AC144772.1-201ENSMUST00000226372 2398 ntBASIC4.45□□□□□ -1.7
Cdx2P43241 Gm37010-201ENSMUST00000194539 1704 ntBASIC4.44□□□□□ -1.7
Cdx2P43241 Glb1l3-201ENSMUST00000034448 2468 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
Cdx2P43241 Lipm-201ENSMUST00000025685 2701 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Cdx2P43241 Ifit2-201ENSMUST00000102826 3818 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Cdx2P43241 Mir292-201ENSMUST00000104847 82 ntBASIC4.44□□□□□ -1.7
Cdx2P43241 Cav1-203ENSMUST00000115454 613 ntTSL 2 BASIC4.44□□□□□ -1.7
Cdx2P43241 Gm12985-201ENSMUST00000118376 183 ntBASIC4.44□□□□□ -1.7
Cdx2P43241 Gm15385-201ENSMUST00000118725 667 ntBASIC4.44□□□□□ -1.7
Cdx2P43241 Olfr1035-ps1-201ENSMUST00000120109 966 ntBASIC4.44□□□□□ -1.7
Cdx2P43241 Gm11506-201ENSMUST00000122414 470 ntBASIC4.44□□□□□ -1.7
Cdx2P43241 4933403O08Rik-201ENSMUST00000132037 999 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
Cdx2P43241 Gm28064-201ENSMUST00000185639 858 ntBASIC4.44□□□□□ -1.7
Cdx2P43241 Gm42999-201ENSMUST00000198049 786 ntBASIC4.44□□□□□ -1.7
Cdx2P43241 Hcfc1r1-ps2-201ENSMUST00000199379 339 ntBASIC4.44□□□□□ -1.7
Cdx2P43241 Gm4734-201ENSMUST00000200117 777 ntBASIC4.44□□□□□ -1.7
Cdx2P43241 Sult1c2-ps1-201ENSMUST00000200231 164 ntBASIC4.44□□□□□ -1.7
Cdx2P43241 Gm43151-201ENSMUST00000201093 657 ntTSL 3 BASIC4.44□□□□□ -1.7
Cdx2P43241 Gm45604-201ENSMUST00000209665 550 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Cdx2P43241 AC154788.1-201ENSMUST00000225003 340 ntBASIC4.44□□□□□ -1.7
Cdx2P43241 Ear-ps9-202ENSMUST00000226796 245 ntBASIC4.44□□□□□ -1.7
Cdx2P43241 Fam183b-201ENSMUST00000060581 493 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Cdx2P43241 n-R5s168-201ENSMUST00000083948 104 ntBASIC4.44□□□□□ -1.7
Cdx2P43241 Olfr944-203ENSMUST00000215306 1523 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Cdx2P43241 Zscan4-ps3-201ENSMUST00000210559 2277 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Cdx2P43241 4930467D21Rik-201ENSMUST00000180634 2530 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Cdx2P43241 Rnf213-202ENSMUST00000131035 16716 ntAPPRIS P5 TSL 5 BASIC4.44□□□□□ -1.7
Cdx2P43241 Gm29536-201ENSMUST00000189296 3283 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Cdx2P43241 Zfp62-202ENSMUST00000109197 4029 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Cdx2P43241 Muc15-202ENSMUST00000111016 3421 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Cdx2P43241 Gm5346-201ENSMUST00000056023 2326 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Cdx2P43241 Vmn2r-ps42-201ENSMUST00000174123 2083 ntBASIC4.44□□□□□ -1.7
Cdx2P43241 Fastkd2-201ENSMUST00000027103 4486 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Cdx2P43241 AC159188.2-201ENSMUST00000224103 1301 ntBASIC4.44□□□□□ -1.7
Cdx2P43241 Gm6645-201ENSMUST00000118505 2726 ntBASIC4.44□□□□□ -1.7
Cdx2P43241 Cdh7-208ENSMUST00000146282 4776 ntTSL 3 BASIC4.44□□□□□ -1.7
Cdx2P43241 Gm45697-201ENSMUST00000212893 2876 ntBASIC4.43□□□□□ -1.7
Cdx2P43241 Samd3-202ENSMUST00000164660 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
Cdx2P43241 Samd3-203ENSMUST00000218301 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
Cdx2P43241 Olfr410-203ENSMUST00000214490 5075 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Cdx2P43241 Olfr1173-201ENSMUST00000099830 2268 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Cdx2P43241 Zp3r-201ENSMUST00000039862 2042 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
Cdx2P43241 Xist-201ENSMUST00000127786 17769 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Cdx2P43241 Ino80d-205ENSMUST00000165066 13529 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Cdx2P43241 Olfr344-202ENSMUST00000215879 7675 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Cdx2P43241 Zfp758-203ENSMUST00000121315 2860 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
Cdx2P43241 Gm23709-201ENSMUST00000104364 130 ntBASIC4.43□□□□□ -1.7
Cdx2P43241 Tmsb15b1-201ENSMUST00000113071 439 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
Cdx2P43241 Gm11698-201ENSMUST00000117948 455 ntBASIC4.43□□□□□ -1.7
Cdx2P43241 Gm15745-201ENSMUST00000119807 115 ntBASIC4.43□□□□□ -1.7
Cdx2P43241 Gm12893-201ENSMUST00000121732 275 ntBASIC4.43□□□□□ -1.7
Cdx2P43241 Pdcl2-202ENSMUST00000122213 1049 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Cdx2P43241 Gm15290-201ENSMUST00000132880 577 ntTSL 3 BASIC4.43□□□□□ -1.7
Cdx2P43241 Gm15346-201ENSMUST00000143638 475 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Cdx2P43241 4930517O19Rik-202ENSMUST00000145018 571 ntTSL 3 BASIC4.43□□□□□ -1.7
Cdx2P43241 Gm16558-201ENSMUST00000163015 532 ntBASIC4.43□□□□□ -1.7
Cdx2P43241 Gm27266-201ENSMUST00000184521 123 ntBASIC4.43□□□□□ -1.7
Cdx2P43241 Gm17916-202ENSMUST00000187634 1187 ntBASIC4.43□□□□□ -1.7
Cdx2P43241 Gm28702-201ENSMUST00000188276 253 ntTSL 5 BASIC4.43□□□□□ -1.7
Cdx2P43241 Il20-202ENSMUST00000188581 465 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Cdx2P43241 Gm43093-201ENSMUST00000202439 1213 ntBASIC4.43□□□□□ -1.7
Cdx2P43241 Gm44009-201ENSMUST00000203539 521 ntTSL 5 BASIC4.43□□□□□ -1.7
Cdx2P43241 AC174459.2-201ENSMUST00000226036 160 ntBASIC4.43□□□□□ -1.7
Cdx2P43241 AC129935.1-201ENSMUST00000226302 873 ntBASIC4.43□□□□□ -1.7
Cdx2P43241 BC028528-202ENSMUST00000090476 809 ntAPPRIS P3 TSL 2 BASIC4.43□□□□□ -1.7
Cdx2P43241 Gm3383-202ENSMUST00000112758 1813 ntAPPRIS P5 TSL 5 BASIC4.43□□□□□ -1.7
Cdx2P43241 Gm3194-202ENSMUST00000180867 1813 ntAPPRIS P5 TSL 5 BASIC4.43□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 103.3 ms