Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Nxf2-203ENSMUST00000113189 2375 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
Traf1P39428 Nlrp1b-203ENSMUST00000108515 4131 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Traf1P39428 Vmn1r217-202ENSMUST00000227110 9888 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Traf1P39428 Mdn1-201ENSMUST00000071642 17970 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
Traf1P39428 Gm2099-202ENSMUST00000223310 3341 ntBASIC5.68□□□□□ -1.5
Traf1P39428 Usp46-201ENSMUST00000068058 4557 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Traf1P39428 Olfr1057-202ENSMUST00000217435 3249 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Traf1P39428 Ccr9-204ENSMUST00000168910 2888 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Traf1P39428 Trappc1-203ENSMUST00000102602 751 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
Traf1P39428 Igkv1-35-201ENSMUST00000103374 359 ntAPPRIS ALT2 BASIC5.68□□□□□ -1.5
Traf1P39428 Gm22778-201ENSMUST00000104090 128 ntBASIC5.68□□□□□ -1.5
Traf1P39428 Gm14711-201ENSMUST00000117056 217 ntBASIC5.68□□□□□ -1.5
Traf1P39428 Gm16463-201ENSMUST00000120527 721 ntBASIC5.68□□□□□ -1.5
Traf1P39428 Defa-ps14-201ENSMUST00000121373 418 ntBASIC5.68□□□□□ -1.5
Traf1P39428 Gm14095-201ENSMUST00000134264 516 ntTSL 3 BASIC5.68□□□□□ -1.5
Traf1P39428 Gm16321-201ENSMUST00000155184 574 ntTSL 3 BASIC5.68□□□□□ -1.5
Traf1P39428 Gm12707-201ENSMUST00000155789 489 ntTSL 3 BASIC5.68□□□□□ -1.5
Traf1P39428 Gm24217-201ENSMUST00000158260 133 ntBASIC5.68□□□□□ -1.5
Traf1P39428 Gm24664-201ENSMUST00000158939 100 ntBASIC5.68□□□□□ -1.5
Traf1P39428 Kcne1-202ENSMUST00000166707 601 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Traf1P39428 Svs4-201ENSMUST00000017142 731 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Traf1P39428 Vdac2-208ENSMUST00000172727 1291 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
Traf1P39428 Obox3-ps8-201ENSMUST00000177182 960 ntBASIC5.68□□□□□ -1.5
Traf1P39428 Mrgprc1-ps-201ENSMUST00000185552 952 ntBASIC5.68□□□□□ -1.5
Traf1P39428 Gm28859-201ENSMUST00000186650 616 ntBASIC5.68□□□□□ -1.5
Traf1P39428 Gm38334-201ENSMUST00000195060 313 ntBASIC5.68□□□□□ -1.5
Traf1P39428 Gm37815-201ENSMUST00000195665 411 ntTSL 5 BASIC5.68□□□□□ -1.5
Traf1P39428 Gm2762-205ENSMUST00000202366 356 ntTSL 3 BASIC5.68□□□□□ -1.5
Traf1P39428 Gm44232-201ENSMUST00000204537 225 ntBASIC5.68□□□□□ -1.5
Traf1P39428 Gm8999-201ENSMUST00000204951 969 ntBASIC5.68□□□□□ -1.5
Traf1P39428 Gm45269-201ENSMUST00000210359 282 ntBASIC5.68□□□□□ -1.5
Traf1P39428 AC121986.1-201ENSMUST00000218588 781 ntBASIC5.68□□□□□ -1.5
Traf1P39428 Gm36423-204ENSMUST00000222446 541 ntTSL 2 BASIC5.68□□□□□ -1.5
Traf1P39428 AC130536.1-201ENSMUST00000224425 271 ntBASIC5.68□□□□□ -1.5
Traf1P39428 CT009600.2-201ENSMUST00000226638 481 ntBASIC5.68□□□□□ -1.5
Traf1P39428 AC139294.1-201ENSMUST00000226708 571 ntBASIC5.68□□□□□ -1.5
Traf1P39428 AC140209.1-204ENSMUST00000226736 739 ntBASIC5.68□□□□□ -1.5
Traf1P39428 Gm22826-201ENSMUST00000083774 165 ntBASIC5.68□□□□□ -1.5
Traf1P39428 Vmn1r55-201ENSMUST00000098844 1284 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Traf1P39428 Tfpi-205ENSMUST00000111717 2962 ntTSL 5 BASIC5.68□□□□□ -1.5
Traf1P39428 Pramef25-201ENSMUST00000105766 1684 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Traf1P39428 Gm43130-201ENSMUST00000197721 3907 ntBASIC5.68□□□□□ -1.5
Traf1P39428 Capn6-201ENSMUST00000087316 3561 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Traf1P39428 Fat1-206ENSMUST00000215588 13938 ntTSL 5 BASIC5.68□□□□□ -1.5
Traf1P39428 2700099C18Rik-204ENSMUST00000183133 1333 ntBASIC5.68□□□□□ -1.5
Traf1P39428 Olfr1252-203ENSMUST00000216203 3243 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
Traf1P39428 A930017M01Rik-205ENSMUST00000227721 4167 ntBASIC5.68□□□□□ -1.5
Traf1P39428 Ank2-207ENSMUST00000182064 12413 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
Traf1P39428 Olfr124-202ENSMUST00000215168 4497 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Traf1P39428 Gm14014-201ENSMUST00000156718 2717 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Traf1P39428 Olfr123-203ENSMUST00000216051 2716 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Traf1P39428 Macc1-205ENSMUST00000222784 4710 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Traf1P39428 Olfr126-202ENSMUST00000213844 1958 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Traf1P39428 Vmn2r-ps128-201ENSMUST00000176367 2570 ntBASIC5.67□□□□□ -1.5
Traf1P39428 Olfr1348-207ENSMUST00000209029 2696 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Traf1P39428 AC152414.1-201ENSMUST00000218784 2287 ntTSL 5 BASIC5.67□□□□□ -1.5
Traf1P39428 Pdc-202ENSMUST00000185698 3335 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Traf1P39428 Zfp329-201ENSMUST00000072222 6727 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Traf1P39428 Gm22272-201ENSMUST00000104039 134 ntBASIC5.67□□□□□ -1.5
Traf1P39428 Olfr328-202ENSMUST00000108824 1199 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
Traf1P39428 Gm14995-201ENSMUST00000117135 391 ntBASIC5.67□□□□□ -1.5
Traf1P39428 Olfr1149-ps1-201ENSMUST00000118232 691 ntBASIC5.67□□□□□ -1.5
Traf1P39428 Gm11409-201ENSMUST00000118621 403 ntBASIC5.67□□□□□ -1.5
Traf1P39428 Cmc4-202ENSMUST00000120286 516 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
Traf1P39428 Gm13484-201ENSMUST00000120738 412 ntBASIC5.67□□□□□ -1.5
Traf1P39428 Gm11844-201ENSMUST00000129207 459 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Traf1P39428 Gm26404-201ENSMUST00000158498 109 ntBASIC5.67□□□□□ -1.5
Traf1P39428 Vmn2r-ps64-201ENSMUST00000173690 523 ntBASIC5.67□□□□□ -1.5
Traf1P39428 Tex50-202ENSMUST00000178511 954 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
Traf1P39428 Gm26983-201ENSMUST00000182051 388 ntBASIC5.67□□□□□ -1.5
Traf1P39428 Mir6344-201ENSMUST00000183462 104 ntBASIC5.67□□□□□ -1.5
Traf1P39428 Gm27528-201ENSMUST00000183544 205 ntBASIC5.67□□□□□ -1.5
Traf1P39428 1700121L03Rik-201ENSMUST00000187796 704 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Traf1P39428 Gm33206-201ENSMUST00000193544 454 ntTSL 2 BASIC5.67□□□□□ -1.5
Traf1P39428 Gm38163-201ENSMUST00000194112 482 ntTSL 5 BASIC5.67□□□□□ -1.5
Traf1P39428 Gm43151-201ENSMUST00000201093 657 ntTSL 3 BASIC5.67□□□□□ -1.5
Traf1P39428 Mir670hg-207ENSMUST00000211619 819 ntTSL 5 BASIC5.67□□□□□ -1.5
Traf1P39428 1700025K04Rik-201ENSMUST00000218075 1174 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Traf1P39428 Olfr603-202ENSMUST00000218246 1021 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Traf1P39428 AC123705.4-202ENSMUST00000221602 697 ntTSL 2 BASIC5.67□□□□□ -1.5
Traf1P39428 Erich6b-201ENSMUST00000022579 869 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Traf1P39428 4933400A11Rik-202ENSMUST00000068894 1217 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Traf1P39428 Olfr488-201ENSMUST00000072968 945 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Traf1P39428 Olfr1000-202ENSMUST00000213837 1915 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
Traf1P39428 Serpini1-201ENSMUST00000029423 4091 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Traf1P39428 Ankar-202ENSMUST00000211837 4543 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Traf1P39428 AC120153.1-201ENSMUST00000226502 1311 ntBASIC5.67□□□□□ -1.5
Traf1P39428 Zfp808-204ENSMUST00000221772 1379 ntTSL 5 BASIC5.67□□□□□ -1.5
Traf1P39428 Prame-201ENSMUST00000033786 1395 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Traf1P39428 Rbm41-203ENSMUST00000113007 3691 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Traf1P39428 Gm10436-201ENSMUST00000071580 1883 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Traf1P39428 Serpinb7-201ENSMUST00000086690 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Traf1P39428 AC102431.1-201ENSMUST00000223773 1449 ntBASIC5.66□□□□□ -1.5
Traf1P39428 Vav3-202ENSMUST00000106576 3123 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Traf1P39428 Gm21244-202ENSMUST00000189201 3115 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Traf1P39428 Gm20667-201ENSMUST00000175674 1930 ntBASIC5.66□□□□□ -1.5
Traf1P39428 Gm42955-201ENSMUST00000197355 3393 ntBASIC5.66□□□□□ -1.5
Traf1P39428 Vmn2r89-201ENSMUST00000159611 2942 ntAPPRIS P4 TSL 1 (best) BASIC5.66□□□□□ -1.5
Traf1P39428 Olfr720-203ENSMUST00000216079 4692 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Traf1P39428 Vmn1r202-202ENSMUST00000228020 5441 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms