Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Gm43605-201ENSMUST00000199663 3426 ntBASIC4.21□□□□□ -1.73
P20040 Gm43654-201ENSMUST00000200664 3417 ntBASIC4.21□□□□□ -1.73
P20040 Gm43312-201ENSMUST00000201655 2466 ntBASIC4.21□□□□□ -1.73
P20040 Gm42559-201ENSMUST00000201811 3532 ntBASIC4.21□□□□□ -1.73
P20040 Acsm3-203ENSMUST00000106527 2557 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
P20040 Gm17131-201ENSMUST00000164420 3846 ntBASIC4.21□□□□□ -1.73
P20040 Gm43130-201ENSMUST00000197721 3907 ntBASIC4.21□□□□□ -1.73
P20040 F13a1-201ENSMUST00000037491 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
P20040 A930017M01Rik-205ENSMUST00000227721 4167 ntBASIC4.21□□□□□ -1.74
P20040 Dync2h1-204ENSMUST00000140466 14264 ntAPPRIS P2 TSL 5 BASIC4.21□□□□□ -1.74
P20040 Olfr1016-203ENSMUST00000217410 2738 ntAPPRIS P1 TSL 3 BASIC4.21□□□□□ -1.74
P20040 Gm8660-201ENSMUST00000105187 918 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
P20040 Gm4177-201ENSMUST00000105196 918 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
P20040 Gm5728-201ENSMUST00000105209 918 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
P20040 Scgb2b3-201ENSMUST00000108090 339 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
P20040 Pigp-201ENSMUST00000113905 758 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
P20040 Rps11-ps3-201ENSMUST00000117608 486 ntBASIC4.21□□□□□ -1.74
P20040 Gm11971-201ENSMUST00000117715 288 ntBASIC4.21□□□□□ -1.74
P20040 Rpl36a-ps4-201ENSMUST00000121019 296 ntBASIC4.21□□□□□ -1.74
P20040 Gm11759-201ENSMUST00000121742 464 ntBASIC4.21□□□□□ -1.74
P20040 Rpl26-ps5-201ENSMUST00000122220 439 ntBASIC4.21□□□□□ -1.74
P20040 Vmn1r94-201ENSMUST00000164526 918 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
P20040 Gm4216-201ENSMUST00000168926 918 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
P20040 Vmn1r142-201ENSMUST00000169697 918 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
P20040 Gm10074-201ENSMUST00000174543 249 ntBASIC4.21□□□□□ -1.74
P20040 Gm26763-201ENSMUST00000180968 1093 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
P20040 2310031A07Rik-201ENSMUST00000181212 990 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
P20040 Gm27036-201ENSMUST00000182465 980 ntBASIC4.21□□□□□ -1.74
P20040 Mir6416-201ENSMUST00000183664 117 ntBASIC4.21□□□□□ -1.74
P20040 1500004A13Rik-206ENSMUST00000184170 576 ntTSL 3 BASIC4.21□□□□□ -1.74
P20040 Mir6398-201ENSMUST00000184541 102 ntBASIC4.21□□□□□ -1.74
P20040 BE692007-201ENSMUST00000186054 954 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
P20040 Gm19206-201ENSMUST00000186401 827 ntBASIC4.21□□□□□ -1.74
P20040 Gm9569-201ENSMUST00000187492 787 ntBASIC4.21□□□□□ -1.74
P20040 Olfr1391-201ENSMUST00000187509 938 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
P20040 Gm19086-201ENSMUST00000190772 665 ntBASIC4.21□□□□□ -1.74
P20040 1700013M08Rik-201ENSMUST00000197709 683 ntTSL 3 BASIC4.21□□□□□ -1.74
P20040 2400006E01Rik-203ENSMUST00000199633 643 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
P20040 Gm43631-201ENSMUST00000202011 369 ntBASIC4.21□□□□□ -1.74
P20040 Gm35216-201ENSMUST00000203777 433 ntTSL 2 BASIC4.21□□□□□ -1.74
P20040 AC131720.3-201ENSMUST00000219113 275 ntBASIC4.21□□□□□ -1.74
P20040 Gm35041-201ENSMUST00000219581 602 ntTSL 3 BASIC4.21□□□□□ -1.74
P20040 AC155236.1-201ENSMUST00000220591 923 ntTSL 5 BASIC4.21□□□□□ -1.74
P20040 Gm7040-201ENSMUST00000223271 443 ntBASIC4.21□□□□□ -1.74
P20040 Erich6b-201ENSMUST00000022579 869 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
P20040 CT009600.2-201ENSMUST00000226638 481 ntBASIC4.21□□□□□ -1.74
P20040 4930583I09Rik-201ENSMUST00000024896 630 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
P20040 Olfr482-201ENSMUST00000081184 972 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
P20040 Fam24a-201ENSMUST00000084505 371 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
P20040 Gm25821-201ENSMUST00000093657 133 ntBASIC4.21□□□□□ -1.74
P20040 Gm3675-201ENSMUST00000175904 1653 ntBASIC4.21□□□□□ -1.74
P20040 Zfp811-201ENSMUST00000080905 1656 ntTSL 5 BASIC4.21□□□□□ -1.74
P20040 Gm14552-201ENSMUST00000126906 2098 ntTSL 5 BASIC4.21□□□□□ -1.74
P20040 Ceacam3-201ENSMUST00000108491 3261 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
P20040 Pcsk2os2-201ENSMUST00000153878 3370 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
P20040 Mbnl1-219ENSMUST00000194201 4319 ntTSL 5 BASIC4.21□□□□□ -1.74
P20040 Tsga10-203ENSMUST00000114902 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
P20040 Cyp3a11-201ENSMUST00000035918 2344 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
P20040 Fbxl13-202ENSMUST00000115234 2143 ntTSL 5 BASIC4.21□□□□□ -1.74
P20040 Serpinb9b-201ENSMUST00000006392 3253 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
P20040 Tcf12-207ENSMUST00000183918 4308 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
P20040 Olfr992-202ENSMUST00000213749 2150 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
P20040 Trpc5os-202ENSMUST00000178233 3515 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
P20040 Ankar-202ENSMUST00000211837 4543 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
P20040 Olfr617-203ENSMUST00000216516 3083 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
P20040 4930503E14Rik-201ENSMUST00000100688 1287 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
P20040 Gm12849-201ENSMUST00000120013 739 ntBASIC4.2□□□□□ -1.74
P20040 Gm12854-201ENSMUST00000128518 297 ntBASIC4.2□□□□□ -1.74
P20040 AI662270-201ENSMUST00000142709 304 ntTSL 2 BASIC4.2□□□□□ -1.74
P20040 Mir1946b-201ENSMUST00000157853 133 ntBASIC4.2□□□□□ -1.74
P20040 Gm25432-201ENSMUST00000158284 66 ntBASIC4.2□□□□□ -1.74
P20040 Gm8362-202ENSMUST00000170673 997 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
P20040 4831440E17Rik-201ENSMUST00000181942 1028 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
P20040 Snhg14-201ENSMUST00000185272 726 ntTSL 5 BASIC4.2□□□□□ -1.74
P20040 Gm5511-201ENSMUST00000189380 802 ntBASIC4.2□□□□□ -1.74
P20040 Gm10421-203ENSMUST00000190266 781 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
P20040 Gm20056-201ENSMUST00000194813 519 ntBASIC4.2□□□□□ -1.74
P20040 Klra14-ps-202ENSMUST00000203601 1104 ntTSL 5 BASIC4.2□□□□□ -1.74
P20040 Gm43919-201ENSMUST00000204303 364 ntBASIC4.2□□□□□ -1.74
P20040 Gm8999-201ENSMUST00000204951 969 ntBASIC4.2□□□□□ -1.74
P20040 Gm4290-201ENSMUST00000206897 814 ntBASIC4.2□□□□□ -1.74
P20040 Gm44779-201ENSMUST00000206937 708 ntBASIC4.2□□□□□ -1.74
P20040 Gm45502-201ENSMUST00000209561 252 ntTSL 3 BASIC4.2□□□□□ -1.74
P20040 Gm45498-201ENSMUST00000210346 283 ntBASIC4.2□□□□□ -1.74
P20040 Olfr1133-202ENSMUST00000217368 993 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
P20040 AC158525.1-201ENSMUST00000223806 576 ntBASIC4.2□□□□□ -1.74
P20040 AC107369.1-201ENSMUST00000227373 860 ntBASIC4.2□□□□□ -1.74
P20040 Gm5215-201ENSMUST00000054380 405 ntBASIC4.2□□□□□ -1.74
P20040 Gm7665-201ENSMUST00000076710 297 ntBASIC4.2□□□□□ -1.74
P20040 Magea3-201ENSMUST00000079867 963 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
P20040 Mir134-201ENSMUST00000083492 71 ntBASIC4.2□□□□□ -1.74
P20040 Olfr612-203ENSMUST00000215663 2473 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
P20040 Vmn1r169-204ENSMUST00000227932 2745 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
P20040 Gm37053-201ENSMUST00000192399 2087 ntBASIC4.2□□□□□ -1.74
P20040 6720489N17Rik-202ENSMUST00000201563 2640 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
P20040 Olfr1311-202ENSMUST00000213602 2631 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
P20040 Cp-203ENSMUST00000108325 3183 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
P20040 Speer5-ps1-201ENSMUST00000169525 1430 ntBASIC4.2□□□□□ -1.74
P20040 Gm44822-201ENSMUST00000208559 6389 ntBASIC4.2□□□□□ -1.74
P20040 Gm2099-202ENSMUST00000223310 3341 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 80.2 ms