Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Olfr1178-202ENSMUST00000214040 6480 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Lire1P11260 Gm42552-201ENSMUST00000196754 4497 ntBASIC4.98□□□□□ -1.61
Lire1P11260 Gm20631-201ENSMUST00000177239 5697 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Lire1P11260 Olfr1271-202ENSMUST00000216383 6613 ntAPPRIS P1 TSL 3 BASIC4.98□□□□□ -1.61
Lire1P11260 Gm29112-201ENSMUST00000188962 3487 ntBASIC4.98□□□□□ -1.61
Lire1P11260 Vmn2r-ps128-201ENSMUST00000176367 2570 ntBASIC4.98□□□□□ -1.61
Lire1P11260 Dnah3-201ENSMUST00000046993 12252 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
Lire1P11260 Cfh-206ENSMUST00000192880 3746 ntTSL 5 BASIC4.98□□□□□ -1.61
Lire1P11260 Gm13084-202ENSMUST00000105769 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
Lire1P11260 Gm12067-201ENSMUST00000119755 1148 ntBASIC4.98□□□□□ -1.61
Lire1P11260 Gm11742-201ENSMUST00000119903 233 ntBASIC4.98□□□□□ -1.61
Lire1P11260 Rpl36a-ps4-201ENSMUST00000121019 296 ntBASIC4.98□□□□□ -1.61
Lire1P11260 Gm11677-201ENSMUST00000121349 977 ntBASIC4.98□□□□□ -1.61
Lire1P11260 Gm12732-201ENSMUST00000121688 180 ntBASIC4.98□□□□□ -1.61
Lire1P11260 Gm5123-201ENSMUST00000121905 837 ntBASIC4.98□□□□□ -1.61
Lire1P11260 Gm14228-201ENSMUST00000131908 798 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Lire1P11260 Gm12226-201ENSMUST00000144172 876 ntBASIC4.98□□□□□ -1.61
Lire1P11260 Gm5755-201ENSMUST00000152394 837 ntBASIC4.98□□□□□ -1.61
Lire1P11260 Gm26069-201ENSMUST00000157497 277 ntBASIC4.98□□□□□ -1.61
Lire1P11260 Gm17472-201ENSMUST00000167638 352 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Lire1P11260 Gm22355-201ENSMUST00000175531 96 ntBASIC4.98□□□□□ -1.61
Lire1P11260 Gm26318-201ENSMUST00000176507 96 ntBASIC4.98□□□□□ -1.61
Lire1P11260 Rp31-ps19-201ENSMUST00000180929 353 ntBASIC4.98□□□□□ -1.61
Lire1P11260 Gm5946-201ENSMUST00000182340 970 ntBASIC4.98□□□□□ -1.61
Lire1P11260 Mir6344-201ENSMUST00000183462 104 ntBASIC4.98□□□□□ -1.61
Lire1P11260 Gm28429-201ENSMUST00000188521 363 ntBASIC4.98□□□□□ -1.61
Lire1P11260 Galntl6-205ENSMUST00000188531 1056 ntTSL 5 BASIC4.98□□□□□ -1.61
Lire1P11260 Gm28701-201ENSMUST00000189778 1010 ntTSL 5 BASIC4.98□□□□□ -1.61
Lire1P11260 Gm38330-201ENSMUST00000192743 959 ntBASIC4.98□□□□□ -1.61
Lire1P11260 Gm37184-201ENSMUST00000194720 650 ntTSL 3 BASIC4.98□□□□□ -1.61
Lire1P11260 Gm45870-201ENSMUST00000211269 601 ntBASIC4.98□□□□□ -1.61
Lire1P11260 Gm29521-203ENSMUST00000216148 805 ntTSL 5 BASIC4.98□□□□□ -1.61
Lire1P11260 Olfr1115-204ENSMUST00000217196 2109 ntAPPRIS P1 TSL 3 BASIC4.98□□□□□ -1.61
Lire1P11260 Gm18904-201ENSMUST00000218756 329 ntBASIC4.98□□□□□ -1.61
Lire1P11260 Gm4263-201ENSMUST00000220693 1101 ntBASIC4.98□□□□□ -1.61
Lire1P11260 Eif1-ps2-201ENSMUST00000221990 339 ntBASIC4.98□□□□□ -1.61
Lire1P11260 AC123534.1-201ENSMUST00000224060 656 ntBASIC4.98□□□□□ -1.61
Lire1P11260 2310061N02Rik-201ENSMUST00000050882 794 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Lire1P11260 1110012L19Rik-201ENSMUST00000053981 1094 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Lire1P11260 Olfr808-201ENSMUST00000060636 939 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Lire1P11260 Olfr1458-201ENSMUST00000076729 906 ntAPPRIS ALT2 BASIC4.98□□□□□ -1.61
Lire1P11260 Vmn1r13-201ENSMUST00000078885 903 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Lire1P11260 Vmn1r27-201ENSMUST00000095862 912 ntAPPRIS P2 BASIC4.98□□□□□ -1.61
Lire1P11260 Olfr704-202ENSMUST00000098141 948 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Lire1P11260 Olfr1249-201ENSMUST00000099769 957 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Lire1P11260 Slco1a1-202ENSMUST00000168119 3904 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
Lire1P11260 Gm44689-201ENSMUST00000208786 1372 ntTSL 5 BASIC4.98□□□□□ -1.61
Lire1P11260 Olfr1279-203ENSMUST00000216697 3385 ntAPPRIS ALT1 TSL 5 BASIC4.98□□□□□ -1.61
Lire1P11260 Gm21854-202ENSMUST00000190391 1480 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Lire1P11260 Slc19a3-203ENSMUST00000164473 1550 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Lire1P11260 Vmn1r89-204ENSMUST00000227239 1992 ntAPPRIS P2 BASIC4.98□□□□□ -1.61
Lire1P11260 Neat1-201ENSMUST00000173672 20771 ntBASIC4.98□□□□□ -1.61
Lire1P11260 B230206I08Rik-201ENSMUST00000207479 3191 ntBASIC4.98□□□□□ -1.61
Lire1P11260 Olfr616-203ENSMUST00000217293 1627 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Lire1P11260 A230107N01Rik-201ENSMUST00000180894 2348 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Lire1P11260 Gm5724-201ENSMUST00000148411 2449 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Lire1P11260 Il12rb2-202ENSMUST00000117441 2600 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Lire1P11260 Gm26814-201ENSMUST00000181178 4149 ntBASIC4.97□□□□□ -1.61
Lire1P11260 Olfr1274-ps-202ENSMUST00000216111 3395 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Lire1P11260 Fam111a-201ENSMUST00000025595 3267 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
Lire1P11260 Olfr518-202ENSMUST00000217803 2994 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Lire1P11260 Vmn1r34-202ENSMUST00000226262 2952 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Lire1P11260 Gm36951-201ENSMUST00000193840 2687 ntBASIC4.97□□□□□ -1.61
Lire1P11260 Gm38243-201ENSMUST00000194737 1567 ntBASIC4.97□□□□□ -1.61
Lire1P11260 Gm24715-201ENSMUST00000102377 95 ntBASIC4.97□□□□□ -1.61
Lire1P11260 Gm15933-201ENSMUST00000117215 616 ntBASIC4.97□□□□□ -1.61
Lire1P11260 Gm13681-201ENSMUST00000117925 210 ntBASIC4.97□□□□□ -1.61
Lire1P11260 Gm14582-201ENSMUST00000141697 1189 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Lire1P11260 Gm15200-201ENSMUST00000149950 410 ntTSL 2 BASIC4.97□□□□□ -1.61
Lire1P11260 Gm26187-201ENSMUST00000157693 101 ntBASIC4.97□□□□□ -1.61
Lire1P11260 Gm23965-201ENSMUST00000157969 142 ntBASIC4.97□□□□□ -1.61
Lire1P11260 Gm23774-201ENSMUST00000158990 131 ntBASIC4.97□□□□□ -1.61
Lire1P11260 Gm16146-201ENSMUST00000160306 439 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Lire1P11260 Gm17159-201ENSMUST00000169043 482 ntBASIC4.97□□□□□ -1.61
Lire1P11260 Gm18800-202ENSMUST00000188688 1105 ntBASIC4.97□□□□□ -1.61
Lire1P11260 Gm33093-201ENSMUST00000197751 790 ntTSL 5 BASIC4.97□□□□□ -1.61
Lire1P11260 1700016F12Rik-201ENSMUST00000198159 655 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Lire1P11260 Gm43786-201ENSMUST00000201722 524 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Lire1P11260 Gm44261-201ENSMUST00000203337 209 ntBASIC4.97□□□□□ -1.61
Lire1P11260 Gm19065-202ENSMUST00000203910 1165 ntBASIC4.97□□□□□ -1.61
Lire1P11260 Gm6261-201ENSMUST00000204707 760 ntBASIC4.97□□□□□ -1.61
Lire1P11260 Gm44876-201ENSMUST00000205394 670 ntTSL 3 BASIC4.97□□□□□ -1.61
Lire1P11260 Gm19921-201ENSMUST00000210505 703 ntBASIC4.97□□□□□ -1.61
Lire1P11260 Rab7-ps1-201ENSMUST00000213253 622 ntBASIC4.97□□□□□ -1.61
Lire1P11260 Olfr153-201ENSMUST00000217113 1258 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Lire1P11260 AC158803.2-201ENSMUST00000219452 679 ntBASIC4.97□□□□□ -1.61
Lire1P11260 AC155922.1-201ENSMUST00000220100 373 ntBASIC4.97□□□□□ -1.61
Lire1P11260 Zfand4-204ENSMUST00000221069 501 ntTSL 3 BASIC4.97□□□□□ -1.61
Lire1P11260 Clec2d-201ENSMUST00000032260 1213 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Lire1P11260 Olfr209-201ENSMUST00000055868 918 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Lire1P11260 Hamp-201ENSMUST00000062620 410 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Lire1P11260 Olfr248-201ENSMUST00000075329 1010 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Lire1P11260 Vmn1r216-201ENSMUST00000080253 1059 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Lire1P11260 Ccl8-201ENSMUST00000009329 511 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Lire1P11260 Gm43166-201ENSMUST00000202871 4379 ntTSL 5 BASIC4.97□□□□□ -1.61
Lire1P11260 Ankar-203ENSMUST00000212573 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
Lire1P11260 Olfr644-202ENSMUST00000213184 3572 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Lire1P11260 Slco6d1-202ENSMUST00000160796 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
Lire1P11260 Olfr1493-ps1-202ENSMUST00000208667 1828 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Lire1P11260 Pnpla8-204ENSMUST00000143771 2974 ntTSL 5 BASIC4.97□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 144.9 ms