Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Gm19170-201ENSMUST00000212440 1084 ntBASIC5.04□□□□□ -1.6
Chmp6P0C0A3 AC153897.1-201ENSMUST00000213510 470 ntTSL 3 BASIC5.04□□□□□ -1.6
Chmp6P0C0A3 AC154296.3-201ENSMUST00000214427 712 ntBASIC5.04□□□□□ -1.6
Chmp6P0C0A3 AC166902.1-201ENSMUST00000216653 517 ntBASIC5.04□□□□□ -1.6
Chmp6P0C0A3 AC123064.2-201ENSMUST00000217758 193 ntBASIC5.04□□□□□ -1.6
Chmp6P0C0A3 Gm8264-201ENSMUST00000217801 465 ntBASIC5.04□□□□□ -1.6
Chmp6P0C0A3 Gm8158-201ENSMUST00000219220 465 ntBASIC5.04□□□□□ -1.6
Chmp6P0C0A3 Gm8112-201ENSMUST00000219637 465 ntBASIC5.04□□□□□ -1.6
Chmp6P0C0A3 AC163721.1-201ENSMUST00000222669 394 ntTSL 3 BASIC5.04□□□□□ -1.6
Chmp6P0C0A3 AC164116.1-201ENSMUST00000225810 622 ntBASIC5.04□□□□□ -1.6
Chmp6P0C0A3 Glipr1l1-201ENSMUST00000073617 896 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Chmp6P0C0A3 Olfr1505-201ENSMUST00000081520 1103 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Chmp6P0C0A3 Xlr4b-203ENSMUST00000081827 1077 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Chmp6P0C0A3 Gm23300-201ENSMUST00000082712 125 ntBASIC5.04□□□□□ -1.6
Chmp6P0C0A3 Olfr143-201ENSMUST00000093865 942 ntAPPRIS P2 BASIC5.04□□□□□ -1.6
Chmp6P0C0A3 Olfr501-ps1-201ENSMUST00000094105 946 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Chmp6P0C0A3 Gm156-201ENSMUST00000095409 682 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Chmp6P0C0A3 Gm45853-201ENSMUST00000212310 3171 ntBASIC5.04□□□□□ -1.6
Chmp6P0C0A3 BC003331-204ENSMUST00000097547 2851 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
Chmp6P0C0A3 Casp4-201ENSMUST00000027012 1435 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Chmp6P0C0A3 Fnbp1l-203ENSMUST00000162947 1830 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Chmp6P0C0A3 Prr11-201ENSMUST00000051395 3824 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Chmp6P0C0A3 Gm42704-201ENSMUST00000196875 1778 ntBASIC5.04□□□□□ -1.6
Chmp6P0C0A3 AC126439.1-201ENSMUST00000226772 2104 ntBASIC5.03□□□□□ -1.6
Chmp6P0C0A3 Olfr393-202ENSMUST00000213365 4048 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Chmp6P0C0A3 Brcc3-202ENSMUST00000114074 2473 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
Chmp6P0C0A3 Olfr726-205ENSMUST00000215278 1324 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
Chmp6P0C0A3 Gm37115-201ENSMUST00000193750 2849 ntBASIC5.03□□□□□ -1.6
Chmp6P0C0A3 Gm43313-201ENSMUST00000201398 2235 ntBASIC5.03□□□□□ -1.6
Chmp6P0C0A3 Olfr1331-203ENSMUST00000216589 3139 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
Chmp6P0C0A3 Dnah3-201ENSMUST00000046993 12252 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
Chmp6P0C0A3 Lrrc4c-201ENSMUST00000059049 3492 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Chmp6P0C0A3 Gm12520-201ENSMUST00000117493 316 ntBASIC5.03□□□□□ -1.6
Chmp6P0C0A3 Gm12760-201ENSMUST00000117861 482 ntBASIC5.03□□□□□ -1.6
Chmp6P0C0A3 Gm24382-201ENSMUST00000122698 107 ntBASIC5.03□□□□□ -1.6
Chmp6P0C0A3 Gm25655-201ENSMUST00000158465 290 ntBASIC5.03□□□□□ -1.6
Chmp6P0C0A3 Mir7022-201ENSMUST00000183749 61 ntBASIC5.03□□□□□ -1.6
Chmp6P0C0A3 Gm19206-201ENSMUST00000186401 827 ntBASIC5.03□□□□□ -1.6
Chmp6P0C0A3 Skint2-204ENSMUST00000186969 1258 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
Chmp6P0C0A3 Gm3145-201ENSMUST00000188584 220 ntBASIC5.03□□□□□ -1.6
Chmp6P0C0A3 Gm36998-201ENSMUST00000193205 704 ntBASIC5.03□□□□□ -1.6
Chmp6P0C0A3 Gm37070-201ENSMUST00000193272 460 ntBASIC5.03□□□□□ -1.6
Chmp6P0C0A3 AC136146.1-201ENSMUST00000196180 91 ntBASIC5.03□□□□□ -1.6
Chmp6P0C0A3 Gm44523-201ENSMUST00000205616 417 ntBASIC5.03□□□□□ -1.6
Chmp6P0C0A3 Gm44738-201ENSMUST00000206393 371 ntTSL 2 BASIC5.03□□□□□ -1.6
Chmp6P0C0A3 Gm44603-201ENSMUST00000206820 367 ntBASIC5.03□□□□□ -1.6
Chmp6P0C0A3 Gm19096-201ENSMUST00000209705 766 ntBASIC5.03□□□□□ -1.6
Chmp6P0C0A3 Gm19201-201ENSMUST00000210127 778 ntBASIC5.03□□□□□ -1.6
Chmp6P0C0A3 Gm45910-201ENSMUST00000212493 1003 ntBASIC5.03□□□□□ -1.6
Chmp6P0C0A3 RMST_1.1-204ENSMUST00000217871 699 ntTSL 5 BASIC5.03□□□□□ -1.6
Chmp6P0C0A3 1700025K04Rik-201ENSMUST00000218075 1174 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Chmp6P0C0A3 AC153870.1-201ENSMUST00000219599 560 ntBASIC5.03□□□□□ -1.6
Chmp6P0C0A3 Aoah-202ENSMUST00000221982 919 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Chmp6P0C0A3 AC096628.1-201ENSMUST00000226060 641 ntBASIC5.03□□□□□ -1.6
Chmp6P0C0A3 Gm16415-201ENSMUST00000080097 489 ntBASIC5.03□□□□□ -1.6
Chmp6P0C0A3 Gm10916-201ENSMUST00000080330 483 ntBASIC5.03□□□□□ -1.6
Chmp6P0C0A3 Olfr1188-201ENSMUST00000090701 968 ntAPPRIS P2 BASIC5.03□□□□□ -1.6
Chmp6P0C0A3 Olfr806-201ENSMUST00000095245 942 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Chmp6P0C0A3 Clca4c-ps-201ENSMUST00000098551 712 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Chmp6P0C0A3 Cmah-202ENSMUST00000110391 9789 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Chmp6P0C0A3 AC187103.2-201ENSMUST00000223605 1617 ntBASIC5.03□□□□□ -1.6
Chmp6P0C0A3 Vmn2r3-201ENSMUST00000170244 2670 ntAPPRIS P2 TSL 5 BASIC5.03□□□□□ -1.6
Chmp6P0C0A3 Sirpb1a-201ENSMUST00000099201 1419 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
Chmp6P0C0A3 Gm42842-201ENSMUST00000197736 3004 ntBASIC5.03□□□□□ -1.6
Chmp6P0C0A3 Pak3-204ENSMUST00000112865 8484 ntAPPRIS P3 TSL 5 BASIC5.03□□□□□ -1.6
Chmp6P0C0A3 Gm37053-201ENSMUST00000192399 2087 ntBASIC5.03□□□□□ -1.6
Chmp6P0C0A3 Vmn1r39-203ENSMUST00000227285 2245 ntAPPRIS ALT2 BASIC5.03□□□□□ -1.6
Chmp6P0C0A3 Nxf2-203ENSMUST00000113189 2375 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
Chmp6P0C0A3 Gm43188-201ENSMUST00000200180 2160 ntBASIC5.02□□□□□ -1.61
Chmp6P0C0A3 Olfr1484-203ENSMUST00000215567 3699 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Chmp6P0C0A3 Gm2123-201ENSMUST00000221476 2836 ntBASIC5.02□□□□□ -1.61
Chmp6P0C0A3 2700099C18Rik-204ENSMUST00000183133 1333 ntBASIC5.02□□□□□ -1.61
Chmp6P0C0A3 Rabgap1-202ENSMUST00000066055 4247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Chmp6P0C0A3 Fgd4-206ENSMUST00000161861 8342 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Chmp6P0C0A3 Ptgs2-201ENSMUST00000035065 4453 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Chmp6P0C0A3 Pigp-201ENSMUST00000113905 758 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Chmp6P0C0A3 Gm10241-201ENSMUST00000117664 286 ntBASIC5.02□□□□□ -1.61
Chmp6P0C0A3 Gm9085-201ENSMUST00000119994 1072 ntBASIC5.02□□□□□ -1.61
Chmp6P0C0A3 Gm13232-201ENSMUST00000121816 632 ntBASIC5.02□□□□□ -1.61
Chmp6P0C0A3 Gm12127-201ENSMUST00000123278 706 ntTSL 3 BASIC5.02□□□□□ -1.61
Chmp6P0C0A3 Gm13330-201ENSMUST00000136400 388 ntTSL 5 BASIC5.02□□□□□ -1.61
Chmp6P0C0A3 Gm16060-201ENSMUST00000153140 478 ntBASIC5.02□□□□□ -1.61
Chmp6P0C0A3 Gm16434-202ENSMUST00000177712 618 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
Chmp6P0C0A3 Gm3453-202ENSMUST00000178308 618 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
Chmp6P0C0A3 Gm6676-202ENSMUST00000178376 618 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
Chmp6P0C0A3 Gm3127-203ENSMUST00000178386 618 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
Chmp6P0C0A3 Gm3187-201ENSMUST00000178429 618 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
Chmp6P0C0A3 Gm3685-202ENSMUST00000179199 618 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
Chmp6P0C0A3 Gm28083-201ENSMUST00000186533 538 ntTSL 5 BASIC5.02□□□□□ -1.61
Chmp6P0C0A3 Hmgn3-205ENSMUST00000187193 855 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
Chmp6P0C0A3 Gm42720-201ENSMUST00000196813 300 ntBASIC5.02□□□□□ -1.61
Chmp6P0C0A3 AC153729.2-201ENSMUST00000215166 560 ntTSL 3 BASIC5.02□□□□□ -1.61
Chmp6P0C0A3 AC109180.1-201ENSMUST00000218676 398 ntBASIC5.02□□□□□ -1.61
Chmp6P0C0A3 AC165164.1-202ENSMUST00000219324 649 ntTSL 3 BASIC5.02□□□□□ -1.61
Chmp6P0C0A3 Olfr968-201ENSMUST00000075928 1027 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Chmp6P0C0A3 Hdx-202ENSMUST00000113422 9534 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Chmp6P0C0A3 Gm17101-201ENSMUST00000169520 1588 ntBASIC5.02□□□□□ -1.61
Chmp6P0C0A3 Dram2-201ENSMUST00000029507 1891 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Chmp6P0C0A3 Cyp3a11-201ENSMUST00000035918 2344 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Chmp6P0C0A3 Zfp426-201ENSMUST00000080386 2417 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 105.5 ms