Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Xrn1-209ENSMUST00000190665 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
Hmgb3O54879 Olfr715b-202ENSMUST00000215713 3879 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Hmgb3O54879 Gm38307-201ENSMUST00000195630 1840 ntBASIC3.68□□□□□ -1.82
Hmgb3O54879 Rbm41-203ENSMUST00000113007 3691 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Hmgb3O54879 Gm44321-201ENSMUST00000204262 2855 ntBASIC3.68□□□□□ -1.82
Hmgb3O54879 Olfr726-203ENSMUST00000213345 1728 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
Hmgb3O54879 Gm1968-201ENSMUST00000100016 348 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Hmgb3O54879 Gm23274-201ENSMUST00000104056 130 ntBASIC3.68□□□□□ -1.82
Hmgb3O54879 Gm11821-201ENSMUST00000117335 979 ntBASIC3.68□□□□□ -1.82
Hmgb3O54879 Gm15785-201ENSMUST00000119145 694 ntBASIC3.68□□□□□ -1.82
Hmgb3O54879 Gm12231-201ENSMUST00000119447 695 ntBASIC3.68□□□□□ -1.82
Hmgb3O54879 Gm13435-201ENSMUST00000120111 1023 ntBASIC3.68□□□□□ -1.82
Hmgb3O54879 Gm13532-201ENSMUST00000120373 240 ntBASIC3.68□□□□□ -1.82
Hmgb3O54879 Gm15212-201ENSMUST00000122403 466 ntBASIC3.68□□□□□ -1.82
Hmgb3O54879 Gm16189-201ENSMUST00000123707 997 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Hmgb3O54879 Klra13-ps-201ENSMUST00000125813 802 ntBASIC3.68□□□□□ -1.82
Hmgb3O54879 Gm15288-201ENSMUST00000126640 653 ntTSL 3 BASIC3.68□□□□□ -1.82
Hmgb3O54879 Tnfsf13os-202ENSMUST00000144033 578 ntTSL 5 BASIC3.68□□□□□ -1.82
Hmgb3O54879 Gm15819-201ENSMUST00000153089 481 ntTSL 2 BASIC3.68□□□□□ -1.82
Hmgb3O54879 Gm24719-201ENSMUST00000157520 110 ntBASIC3.68□□□□□ -1.82
Hmgb3O54879 Mir1963-201ENSMUST00000158594 59 ntBASIC3.68□□□□□ -1.82
Hmgb3O54879 Vmn1r122-201ENSMUST00000164409 918 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Hmgb3O54879 Vmn1r159-201ENSMUST00000167871 918 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Hmgb3O54879 Mir3572-201ENSMUST00000175549 86 ntBASIC3.68□□□□□ -1.82
Hmgb3O54879 Gm6214-201ENSMUST00000178845 541 ntBASIC3.68□□□□□ -1.82
Hmgb3O54879 Gm27985-201ENSMUST00000185112 378 ntBASIC3.68□□□□□ -1.82
Hmgb3O54879 Skint2-204ENSMUST00000186969 1258 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
Hmgb3O54879 Gm29522-201ENSMUST00000191530 621 ntTSL 5 BASIC3.68□□□□□ -1.82
Hmgb3O54879 Gm43580-201ENSMUST00000202892 284 ntBASIC3.68□□□□□ -1.82
Hmgb3O54879 Clec2g-206ENSMUST00000204259 893 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Hmgb3O54879 1700110I07Rik-201ENSMUST00000205487 726 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Hmgb3O54879 Gm45006-201ENSMUST00000206078 690 ntBASIC3.68□□□□□ -1.82
Hmgb3O54879 Gm8556-201ENSMUST00000210437 664 ntBASIC3.68□□□□□ -1.82
Hmgb3O54879 Gm45874-201ENSMUST00000212423 346 ntBASIC3.68□□□□□ -1.82
Hmgb3O54879 AC151971.3-201ENSMUST00000214694 404 ntBASIC3.68□□□□□ -1.82
Hmgb3O54879 A330049N07Rik-202ENSMUST00000219920 587 ntTSL 5 BASIC3.68□□□□□ -1.82
Hmgb3O54879 AC124687.2-201ENSMUST00000221927 1228 ntTSL 5 BASIC3.68□□□□□ -1.82
Hmgb3O54879 AC156560.3-201ENSMUST00000222978 3841 ntBASIC3.68□□□□□ -1.82
Hmgb3O54879 Gm9512-201ENSMUST00000223112 497 ntBASIC3.68□□□□□ -1.82
Hmgb3O54879 AL807824.1-201ENSMUST00000223151 183 ntBASIC3.68□□□□□ -1.82
Hmgb3O54879 AC140368.1-202ENSMUST00000226131 658 ntBASIC3.68□□□□□ -1.82
Hmgb3O54879 CT030238.1-201ENSMUST00000228393 442 ntBASIC3.68□□□□□ -1.82
Hmgb3O54879 Pramel6-201ENSMUST00000026956 1540 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Hmgb3O54879 Gm7876-202ENSMUST00000171305 1758 ntAPPRIS P5 TSL 5 BASIC3.68□□□□□ -1.82
Hmgb3O54879 Gm13100-201ENSMUST00000117157 1439 ntBASIC3.68□□□□□ -1.82
Hmgb3O54879 Olfr823-202ENSMUST00000213145 1431 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Hmgb3O54879 Gm42717-201ENSMUST00000197309 3463 ntBASIC3.68□□□□□ -1.82
Hmgb3O54879 Olfr716-207ENSMUST00000216871 4062 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Hmgb3O54879 Vmn2r48-201ENSMUST00000165611 2568 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Hmgb3O54879 4930533I22Rik-201ENSMUST00000176290 2564 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Hmgb3O54879 Gm14015-201ENSMUST00000130634 3949 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Hmgb3O54879 Gm35191-201ENSMUST00000200925 2475 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Hmgb3O54879 Gm42455-201ENSMUST00000199761 2736 ntBASIC3.67□□□□□ -1.82
Hmgb3O54879 Olfr109-203ENSMUST00000214938 5550 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Hmgb3O54879 Gm29048-202ENSMUST00000190399 1601 ntTSL 5 BASIC3.67□□□□□ -1.82
Hmgb3O54879 Gm14443-201ENSMUST00000109054 4516 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Hmgb3O54879 Sycp2-201ENSMUST00000081134 5717 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Hmgb3O54879 Defb30-202ENSMUST00000111207 989 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
Hmgb3O54879 Gm11255-201ENSMUST00000120448 1180 ntBASIC3.67□□□□□ -1.82
Hmgb3O54879 Gm12519-201ENSMUST00000134099 693 ntTSL 5 BASIC3.67□□□□□ -1.82
Hmgb3O54879 Gm12259-201ENSMUST00000138391 328 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Hmgb3O54879 Gm24216-201ENSMUST00000158259 117 ntBASIC3.67□□□□□ -1.82
Hmgb3O54879 Obox3-ps8-201ENSMUST00000177182 960 ntBASIC3.67□□□□□ -1.82
Hmgb3O54879 Ap3m1-ps-201ENSMUST00000177652 1258 ntBASIC3.67□□□□□ -1.82
Hmgb3O54879 Gm26693-201ENSMUST00000181318 1021 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Hmgb3O54879 Gm8241-201ENSMUST00000189286 816 ntBASIC3.67□□□□□ -1.82
Hmgb3O54879 7420461P10Rik-203ENSMUST00000193898 545 ntAPPRIS ALT2 TSL 3 BASIC3.67□□□□□ -1.82
Hmgb3O54879 Gm37095-201ENSMUST00000195421 205 ntBASIC3.67□□□□□ -1.82
Hmgb3O54879 Gm43828-201ENSMUST00000196890 639 ntBASIC3.67□□□□□ -1.82
Hmgb3O54879 Gm43418-201ENSMUST00000201334 428 ntBASIC3.67□□□□□ -1.82
Hmgb3O54879 Gm44389-201ENSMUST00000203795 182 ntBASIC3.67□□□□□ -1.82
Hmgb3O54879 Gm45317-201ENSMUST00000210385 223 ntBASIC3.67□□□□□ -1.82
Hmgb3O54879 AC165245.1-201ENSMUST00000214181 636 ntTSL 3 BASIC3.67□□□□□ -1.82
Hmgb3O54879 AC123832.2-201ENSMUST00000215151 129 ntBASIC3.67□□□□□ -1.82
Hmgb3O54879 Olfr628-202ENSMUST00000218266 951 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Hmgb3O54879 Gm35041-201ENSMUST00000219581 602 ntTSL 3 BASIC3.67□□□□□ -1.82
Hmgb3O54879 AC158803.3-201ENSMUST00000220024 211 ntBASIC3.67□□□□□ -1.82
Hmgb3O54879 9530050K03Rik-201ENSMUST00000221663 1299 ntBASIC3.67□□□□□ -1.82
Hmgb3O54879 Gm9202-201ENSMUST00000223036 437 ntBASIC3.67□□□□□ -1.82
Hmgb3O54879 AC154724.1-201ENSMUST00000225782 821 ntBASIC3.67□□□□□ -1.82
Hmgb3O54879 Vmn1r16-201ENSMUST00000227168 912 ntAPPRIS P2 BASIC3.67□□□□□ -1.82
Hmgb3O54879 Ms4a2-201ENSMUST00000025583 1211 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Hmgb3O54879 Olfr1020-201ENSMUST00000055840 1079 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Hmgb3O54879 Tas2r109-201ENSMUST00000067539 951 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Hmgb3O54879 Gm4963-201ENSMUST00000072718 378 ntBASIC3.67□□□□□ -1.82
Hmgb3O54879 n-R5s168-201ENSMUST00000083948 104 ntBASIC3.67□□□□□ -1.82
Hmgb3O54879 Olfr243-201ENSMUST00000098194 951 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Hmgb3O54879 Olfr625-ps1-201ENSMUST00000098195 966 ntAPPRIS P5 BASIC3.67□□□□□ -1.82
Hmgb3O54879 Olfr1200-201ENSMUST00000099811 1011 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Hmgb3O54879 Zfp667-202ENSMUST00000108562 3498 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
Hmgb3O54879 Klhl13-204ENSMUST00000115317 3216 ntAPPRIS ALT1 TSL 5 BASIC3.67□□□□□ -1.82
Hmgb3O54879 Cdr1-201ENSMUST00000166381 2313 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Hmgb3O54879 AC102431.1-201ENSMUST00000223773 1449 ntBASIC3.67□□□□□ -1.82
Hmgb3O54879 Gab3-203ENSMUST00000114109 2093 ntTSL 2 BASIC3.67□□□□□ -1.82
Hmgb3O54879 Gm44567-201ENSMUST00000205645 2631 ntBASIC3.67□□□□□ -1.82
Hmgb3O54879 Olfr870-202ENSMUST00000215984 4091 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Hmgb3O54879 Gm9921-201ENSMUST00000173293 4399 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Hmgb3O54879 Olfr388-ps1-201ENSMUST00000118336 2129 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Hmgb3O54879 Gm42946-201ENSMUST00000196108 2570 ntBASIC3.66□□□□□ -1.82
Hmgb3O54879 Gm44532-201ENSMUST00000207723 2598 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 95.9 ms