Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Vmn2r93-201ENSMUST00000079206 2574 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Scn3aA2ASI5 Amd2-201ENSMUST00000080898 3218 ntAPPRIS P1 BASIC5□□□□□ -1.61
Scn3aA2ASI5 Gm15394-201ENSMUST00000119656 1308 ntBASIC5□□□□□ -1.61
Scn3aA2ASI5 Gm17131-201ENSMUST00000164420 3846 ntBASIC5□□□□□ -1.61
Scn3aA2ASI5 Epha7-201ENSMUST00000029964 6746 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
Scn3aA2ASI5 Gp6-202ENSMUST00000206928 5900 ntAPPRIS P2 TSL 1 (best) BASIC5□□□□□ -1.61
Scn3aA2ASI5 4930421C12Rik-201ENSMUST00000200814 1574 ntBASIC5□□□□□ -1.61
Scn3aA2ASI5 Vmn1r171-205ENSMUST00000226771 2718 ntAPPRIS ALT2 BASIC5□□□□□ -1.61
Scn3aA2ASI5 Gm26655-203ENSMUST00000181095 2078 ntTSL 1 (best) BASIC5□□□□□ -1.61
Scn3aA2ASI5 Gm26680-203ENSMUST00000181701 2078 ntTSL 1 (best) BASIC5□□□□□ -1.61
Scn3aA2ASI5 Gm26630-204ENSMUST00000181759 2078 ntTSL 1 (best) BASIC5□□□□□ -1.61
Scn3aA2ASI5 Gm26650-204ENSMUST00000181881 2078 ntTSL 1 (best) BASIC5□□□□□ -1.61
Scn3aA2ASI5 AC174797.3-203ENSMUST00000225749 2078 ntBASIC5□□□□□ -1.61
Scn3aA2ASI5 Mir879-201ENSMUST00000104703 76 ntBASIC5□□□□□ -1.61
Scn3aA2ASI5 Gm8666-201ENSMUST00000117517 292 ntBASIC5□□□□□ -1.61
Scn3aA2ASI5 Gm11878-201ENSMUST00000117908 400 ntBASIC5□□□□□ -1.61
Scn3aA2ASI5 Gm25290-201ENSMUST00000122796 144 ntBASIC5□□□□□ -1.61
Scn3aA2ASI5 Gm44463-201ENSMUST00000198895 137 ntBASIC5□□□□□ -1.61
Scn3aA2ASI5 Gm43895-201ENSMUST00000203219 855 ntBASIC5□□□□□ -1.61
Scn3aA2ASI5 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC5□□□□□ -1.61
Scn3aA2ASI5 Gm18510-201ENSMUST00000219335 1096 ntBASIC5□□□□□ -1.61
Scn3aA2ASI5 Rps24-205ENSMUST00000223999 525 ntAPPRIS ALT1 BASIC5□□□□□ -1.61
Scn3aA2ASI5 Olfr1277-201ENSMUST00000099619 962 ntAPPRIS P1 BASIC5□□□□□ -1.61
Scn3aA2ASI5 Gm6162-201ENSMUST00000194870 2930 ntBASIC5□□□□□ -1.61
Scn3aA2ASI5 Tfpi2-201ENSMUST00000031674 1530 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Scn3aA2ASI5 Gm43527-201ENSMUST00000198749 3178 ntBASIC5□□□□□ -1.61
Scn3aA2ASI5 Zscan4-ps1-201ENSMUST00000165848 2015 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Scn3aA2ASI5 Cav1-201ENSMUST00000007799 2522 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Scn3aA2ASI5 Olfr753-ps1-203ENSMUST00000208970 2764 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Scn3aA2ASI5 Olfr575-202ENSMUST00000213477 3512 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Scn3aA2ASI5 Cybb-201ENSMUST00000015484 4752 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Scn3aA2ASI5 Olfr698-202ENSMUST00000214306 4006 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Scn3aA2ASI5 AC159188.2-201ENSMUST00000224103 1301 ntBASIC5□□□□□ -1.61
Scn3aA2ASI5 Pot1a-203ENSMUST00000115330 3151 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Scn3aA2ASI5 Vmn1r193-204ENSMUST00000228303 6653 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Scn3aA2ASI5 Gm22758-201ENSMUST00000102275 96 ntBASIC4.99□□□□□ -1.61
Scn3aA2ASI5 Igkv5-45-201ENSMUST00000103366 385 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Scn3aA2ASI5 Gm22986-201ENSMUST00000122753 130 ntBASIC4.99□□□□□ -1.61
Scn3aA2ASI5 Chrna1os-201ENSMUST00000125413 680 ntTSL 3 BASIC4.99□□□□□ -1.61
Scn3aA2ASI5 Gm14710-201ENSMUST00000146082 1066 ntBASIC4.99□□□□□ -1.61
Scn3aA2ASI5 Gm14637-201ENSMUST00000156516 444 ntTSL 2 BASIC4.99□□□□□ -1.61
Scn3aA2ASI5 Gm23905-201ENSMUST00000157568 109 ntBASIC4.99□□□□□ -1.61
Scn3aA2ASI5 Vmn1r166-201ENSMUST00000164045 921 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Scn3aA2ASI5 Gm8453-201ENSMUST00000167253 921 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Scn3aA2ASI5 Gm4498-201ENSMUST00000168580 921 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Scn3aA2ASI5 Vmn1r118-201ENSMUST00000172322 921 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Scn3aA2ASI5 Gm8693-201ENSMUST00000178871 921 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Scn3aA2ASI5 Vmn1r138-201ENSMUST00000179206 921 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Scn3aA2ASI5 Vmn1r131-201ENSMUST00000179390 921 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Scn3aA2ASI5 Vmn1r111-201ENSMUST00000179511 921 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Scn3aA2ASI5 Gm36991-201ENSMUST00000191800 648 ntBASIC4.99□□□□□ -1.61
Scn3aA2ASI5 Clec2g-205ENSMUST00000203405 967 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Scn3aA2ASI5 Gm5876-201ENSMUST00000203735 243 ntBASIC4.99□□□□□ -1.61
Scn3aA2ASI5 Gm44038-201ENSMUST00000203952 889 ntBASIC4.99□□□□□ -1.61
Scn3aA2ASI5 Tpt1-ps4-201ENSMUST00000210908 503 ntBASIC4.99□□□□□ -1.61
Scn3aA2ASI5 AL606513.1-201ENSMUST00000225369 579 ntBASIC4.99□□□□□ -1.61
Scn3aA2ASI5 Abca13-201ENSMUST00000042740 16011 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Scn3aA2ASI5 Cfap61-207ENSMUST00000138774 3308 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Scn3aA2ASI5 Zscan4a-201ENSMUST00000210573 2279 ntBASIC4.99□□□□□ -1.61
Scn3aA2ASI5 Oog1-202ENSMUST00000222112 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
Scn3aA2ASI5 Ccdc66-202ENSMUST00000223689 4262 ntAPPRIS P2 BASIC4.99□□□□□ -1.61
Scn3aA2ASI5 Olfr231-202ENSMUST00000214446 5204 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Scn3aA2ASI5 Olfr310-202ENSMUST00000217724 1400 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Scn3aA2ASI5 Olfr1311-202ENSMUST00000213602 2631 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Scn3aA2ASI5 Olfr1238-203ENSMUST00000217237 5761 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Scn3aA2ASI5 Gm42842-201ENSMUST00000197736 3004 ntBASIC4.99□□□□□ -1.61
Scn3aA2ASI5 Gm37060-201ENSMUST00000194997 2397 ntBASIC4.99□□□□□ -1.61
Scn3aA2ASI5 Tnrc6b-201ENSMUST00000067689 17332 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Scn3aA2ASI5 Vmn1r213-202ENSMUST00000227573 3515 ntAPPRIS ALT2 BASIC4.99□□□□□ -1.61
Scn3aA2ASI5 Gm14539-201ENSMUST00000117527 174 ntBASIC4.99□□□□□ -1.61
Scn3aA2ASI5 Gm13686-201ENSMUST00000122851 350 ntTSL 3 BASIC4.99□□□□□ -1.61
Scn3aA2ASI5 Gm13174-201ENSMUST00000126141 220 ntTSL 3 BASIC4.99□□□□□ -1.61
Scn3aA2ASI5 Fpr2-202ENSMUST00000149944 883 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Scn3aA2ASI5 4930441J16Rik-201ENSMUST00000153743 516 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Scn3aA2ASI5 Gm44650-201ENSMUST00000206929 194 ntBASIC4.99□□□□□ -1.61
Scn3aA2ASI5 Vmn2r-ps61-201ENSMUST00000207286 889 ntBASIC4.99□□□□□ -1.61
Scn3aA2ASI5 RMST_1.1-204ENSMUST00000217871 699 ntTSL 5 BASIC4.99□□□□□ -1.61
Scn3aA2ASI5 AC133283.1-201ENSMUST00000228443 859 ntBASIC4.99□□□□□ -1.61
Scn3aA2ASI5 Olfr830-201ENSMUST00000078861 948 ntAPPRIS P2 BASIC4.99□□□□□ -1.61
Scn3aA2ASI5 Gm26535-201ENSMUST00000181602 2600 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Scn3aA2ASI5 Gm6558-201ENSMUST00000191934 1973 ntBASIC4.99□□□□□ -1.61
Scn3aA2ASI5 Gm38081-201ENSMUST00000192680 1645 ntBASIC4.98□□□□□ -1.61
Scn3aA2ASI5 Zfp935-201ENSMUST00000076195 1631 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Scn3aA2ASI5 Dcun1d1-212ENSMUST00000198389 3020 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Scn3aA2ASI5 Agbl1-201ENSMUST00000026854 3452 ntAPPRIS ALT2 TSL 2 BASIC4.98□□□□□ -1.61
Scn3aA2ASI5 Cdh7-209ENSMUST00000172005 3353 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Scn3aA2ASI5 Olfr293-202ENSMUST00000214401 2852 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Scn3aA2ASI5 Vmn2r26-201ENSMUST00000032238 2568 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Scn3aA2ASI5 St18-213ENSMUST00000163727 5604 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Scn3aA2ASI5 Vmn1r35-202ENSMUST00000227346 1854 ntBASIC4.98□□□□□ -1.61
Scn3aA2ASI5 Olfr827-202ENSMUST00000213568 8457 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Scn3aA2ASI5 Gm43059-201ENSMUST00000202437 1388 ntBASIC4.98□□□□□ -1.61
Scn3aA2ASI5 Gm12252-201ENSMUST00000119517 219 ntBASIC4.98□□□□□ -1.61
Scn3aA2ASI5 Gm25264-201ENSMUST00000158519 117 ntBASIC4.98□□□□□ -1.61
Scn3aA2ASI5 Gm3191-201ENSMUST00000167139 346 ntBASIC4.98□□□□□ -1.61
Scn3aA2ASI5 Gm8890-202ENSMUST00000177727 465 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
Scn3aA2ASI5 Gm28786-201ENSMUST00000187228 172 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Scn3aA2ASI5 Gm28269-201ENSMUST00000189511 559 ntAPPRIS P1 TSL 3 BASIC4.98□□□□□ -1.61
Scn3aA2ASI5 Gm37560-201ENSMUST00000194289 1000 ntBASIC4.98□□□□□ -1.61
Scn3aA2ASI5 Trbv11-201ENSMUST00000194354 260 ntBASIC4.98□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 89.5 ms