Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 4930533I22Rik-201ENSMUST00000176290 2564 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Trim3Q9R1R2 Gm14995-201ENSMUST00000117135 391 ntBASIC4.55□□□□□ -1.68
Trim3Q9R1R2 Gm16089-201ENSMUST00000117679 336 ntBASIC4.55□□□□□ -1.68
Trim3Q9R1R2 Gm12423-201ENSMUST00000118334 135 ntBASIC4.55□□□□□ -1.68
Trim3Q9R1R2 Gm12752-201ENSMUST00000121657 811 ntBASIC4.55□□□□□ -1.68
Trim3Q9R1R2 Gm15530-201ENSMUST00000122206 555 ntBASIC4.55□□□□□ -1.68
Trim3Q9R1R2 Gm13487-201ENSMUST00000122240 864 ntBASIC4.55□□□□□ -1.68
Trim3Q9R1R2 Gm24371-201ENSMUST00000122662 267 ntBASIC4.55□□□□□ -1.68
Trim3Q9R1R2 Mageb6-ps-201ENSMUST00000126612 1032 ntBASIC4.55□□□□□ -1.68
Trim3Q9R1R2 Stx5a-215ENSMUST00000176570 563 ntTSL 2 BASIC4.55□□□□□ -1.68
Trim3Q9R1R2 Trav12-2-201ENSMUST00000180972 426 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Trim3Q9R1R2 Gm28769-201ENSMUST00000190176 615 ntBASIC4.55□□□□□ -1.68
Trim3Q9R1R2 Gm37241-201ENSMUST00000191736 523 ntBASIC4.55□□□□□ -1.68
Trim3Q9R1R2 Gm37884-201ENSMUST00000191857 818 ntBASIC4.55□□□□□ -1.68
Trim3Q9R1R2 Gm18426-201ENSMUST00000191874 973 ntBASIC4.55□□□□□ -1.68
Trim3Q9R1R2 Gm37614-201ENSMUST00000195645 210 ntBASIC4.55□□□□□ -1.68
Trim3Q9R1R2 Gm18867-201ENSMUST00000198022 1179 ntBASIC4.55□□□□□ -1.68
Trim3Q9R1R2 Gm43698-202ENSMUST00000202864 555 ntTSL 3 BASIC4.55□□□□□ -1.68
Trim3Q9R1R2 Gm4290-201ENSMUST00000206897 814 ntBASIC4.55□□□□□ -1.68
Trim3Q9R1R2 Gm45435-201ENSMUST00000211147 475 ntTSL 5 BASIC4.55□□□□□ -1.68
Trim3Q9R1R2 AC142273.1-201ENSMUST00000213723 673 ntBASIC4.55□□□□□ -1.68
Trim3Q9R1R2 AC131720.3-201ENSMUST00000219113 275 ntBASIC4.55□□□□□ -1.68
Trim3Q9R1R2 Fam228b-208ENSMUST00000219898 288 ntAPPRIS ALT2 TSL 3 BASIC4.55□□□□□ -1.68
Trim3Q9R1R2 Gm6171-201ENSMUST00000220760 645 ntBASIC4.55□□□□□ -1.68
Trim3Q9R1R2 AC125190.2-201ENSMUST00000221160 497 ntBASIC4.55□□□□□ -1.68
Trim3Q9R1R2 Gm19189-201ENSMUST00000221689 754 ntBASIC4.55□□□□□ -1.68
Trim3Q9R1R2 AC105407.3-201ENSMUST00000224161 648 ntBASIC4.55□□□□□ -1.68
Trim3Q9R1R2 Olfr482-201ENSMUST00000081184 972 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Trim3Q9R1R2 Mir342-201ENSMUST00000083502 99 ntBASIC4.55□□□□□ -1.68
Trim3Q9R1R2 Csn3-203ENSMUST00000113271 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Trim3Q9R1R2 Neat1-201ENSMUST00000173672 20771 ntBASIC4.55□□□□□ -1.68
Trim3Q9R1R2 Gm42869-201ENSMUST00000199953 2121 ntBASIC4.55□□□□□ -1.68
Trim3Q9R1R2 Gm3526-201ENSMUST00000164544 1750 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Trim3Q9R1R2 Olfr1217-202ENSMUST00000213669 3839 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Trim3Q9R1R2 Vmn1r169-202ENSMUST00000226669 2326 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Trim3Q9R1R2 Gm43010-201ENSMUST00000195993 2878 ntBASIC4.55□□□□□ -1.68
Trim3Q9R1R2 AC149588.1-201ENSMUST00000228274 3745 ntBASIC4.55□□□□□ -1.68
Trim3Q9R1R2 4930435E12Rik-201ENSMUST00000122078 1368 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Trim3Q9R1R2 Macf1-201ENSMUST00000082108 17331 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Trim3Q9R1R2 Gm43668-201ENSMUST00000197014 5342 ntBASIC4.54□□□□□ -1.68
Trim3Q9R1R2 Gm6162-201ENSMUST00000194870 2930 ntBASIC4.54□□□□□ -1.68
Trim3Q9R1R2 AC122382.2-201ENSMUST00000225128 3602 ntBASIC4.54□□□□□ -1.68
Trim3Q9R1R2 Tmco2-201ENSMUST00000106268 719 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Trim3Q9R1R2 Gm11790-201ENSMUST00000119569 455 ntBASIC4.54□□□□□ -1.68
Trim3Q9R1R2 Gm11325-201ENSMUST00000119967 469 ntBASIC4.54□□□□□ -1.68
Trim3Q9R1R2 Gm15390-201ENSMUST00000120323 738 ntBASIC4.54□□□□□ -1.68
Trim3Q9R1R2 0610040B10Rik-201ENSMUST00000160231 501 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Trim3Q9R1R2 Gng2-206ENSMUST00000162425 393 ntAPPRIS P1 TSL 3 BASIC4.54□□□□□ -1.68
Trim3Q9R1R2 Gm16107-201ENSMUST00000162523 862 ntBASIC4.54□□□□□ -1.68
Trim3Q9R1R2 Gm17421-201ENSMUST00000167845 674 ntBASIC4.54□□□□□ -1.68
Trim3Q9R1R2 Gm20389-201ENSMUST00000174217 1006 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Trim3Q9R1R2 Mir3090-201ENSMUST00000175597 87 ntBASIC4.54□□□□□ -1.68
Trim3Q9R1R2 Cox6b2-202ENSMUST00000182048 465 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Trim3Q9R1R2 Gm28118-201ENSMUST00000185957 294 ntBASIC4.54□□□□□ -1.68
Trim3Q9R1R2 Gm29556-201ENSMUST00000187591 696 ntBASIC4.54□□□□□ -1.68
Trim3Q9R1R2 Gm43631-201ENSMUST00000202011 369 ntBASIC4.54□□□□□ -1.68
Trim3Q9R1R2 Gm19617-201ENSMUST00000202977 308 ntBASIC4.54□□□□□ -1.68
Trim3Q9R1R2 Gm43922-201ENSMUST00000205071 328 ntBASIC4.54□□□□□ -1.68
Trim3Q9R1R2 Gm45083-201ENSMUST00000205216 712 ntTSL 3 BASIC4.54□□□□□ -1.68
Trim3Q9R1R2 Gm30606-201ENSMUST00000212801 847 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Trim3Q9R1R2 Gm7822-201ENSMUST00000222433 581 ntBASIC4.54□□□□□ -1.68
Trim3Q9R1R2 AC159263.3-201ENSMUST00000223434 460 ntBASIC4.54□□□□□ -1.68
Trim3Q9R1R2 Prl7a1-203ENSMUST00000224852 1283 ntBASIC4.54□□□□□ -1.68
Trim3Q9R1R2 AC154840.1-201ENSMUST00000225216 408 ntBASIC4.54□□□□□ -1.68
Trim3Q9R1R2 AC124549.1-201ENSMUST00000225912 333 ntBASIC4.54□□□□□ -1.68
Trim3Q9R1R2 Prl7a1-201ENSMUST00000006659 940 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
Trim3Q9R1R2 Vmn1r214-201ENSMUST00000074252 1227 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Trim3Q9R1R2 Mir17-201ENSMUST00000083574 84 ntBASIC4.54□□□□□ -1.68
Trim3Q9R1R2 n-R5s27-201ENSMUST00000093699 119 ntBASIC4.54□□□□□ -1.68
Trim3Q9R1R2 Olfr1277-201ENSMUST00000099619 962 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Trim3Q9R1R2 Chek1-205ENSMUST00000173963 1509 ntTSL 5 BASIC4.54□□□□□ -1.68
Trim3Q9R1R2 Olfr1290-204ENSMUST00000217611 2729 ntAPPRIS P1 TSL 3 BASIC4.54□□□□□ -1.68
Trim3Q9R1R2 Olfr1300-ps1-201ENSMUST00000208175 2235 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Trim3Q9R1R2 Gm29098-201ENSMUST00000186104 1498 ntTSL 5 BASIC4.54□□□□□ -1.68
Trim3Q9R1R2 Gm28130-201ENSMUST00000186321 1498 ntTSL 5 BASIC4.54□□□□□ -1.68
Trim3Q9R1R2 Gm28089-202ENSMUST00000187266 1498 ntTSL 5 BASIC4.54□□□□□ -1.68
Trim3Q9R1R2 Gm29204-202ENSMUST00000187384 1498 ntTSL 5 BASIC4.54□□□□□ -1.68
Trim3Q9R1R2 Gm28753-201ENSMUST00000187804 1498 ntTSL 5 BASIC4.54□□□□□ -1.68
Trim3Q9R1R2 Gm28518-203ENSMUST00000188788 1498 ntTSL 5 BASIC4.54□□□□□ -1.68
Trim3Q9R1R2 Gm28488-203ENSMUST00000188792 1498 ntTSL 5 BASIC4.54□□□□□ -1.68
Trim3Q9R1R2 Gm29131-202ENSMUST00000189485 1498 ntTSL 5 BASIC4.54□□□□□ -1.68
Trim3Q9R1R2 Gm28284-202ENSMUST00000190221 1498 ntTSL 5 BASIC4.54□□□□□ -1.68
Trim3Q9R1R2 Gm28764-203ENSMUST00000191194 1498 ntTSL 5 BASIC4.54□□□□□ -1.68
Trim3Q9R1R2 Olfr1501-203ENSMUST00000215350 4395 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Trim3Q9R1R2 Olfr410-203ENSMUST00000214490 5075 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Trim3Q9R1R2 Mbnl1-219ENSMUST00000194201 4319 ntTSL 5 BASIC4.54□□□□□ -1.68
Trim3Q9R1R2 Olfr1178-202ENSMUST00000214040 6480 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Trim3Q9R1R2 Gm45322-201ENSMUST00000211642 1361 ntBASIC4.53□□□□□ -1.68
Trim3Q9R1R2 Gm37562-201ENSMUST00000194763 4328 ntBASIC4.53□□□□□ -1.68
Trim3Q9R1R2 Olfr1341-202ENSMUST00000214131 4300 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Trim3Q9R1R2 2700016F22Rik-201ENSMUST00000181556 3605 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Trim3Q9R1R2 Skint4-201ENSMUST00000069769 3367 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
Trim3Q9R1R2 Gm21244-202ENSMUST00000189201 3115 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Trim3Q9R1R2 Cfhr1-201ENSMUST00000023965 1793 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Trim3Q9R1R2 Oxr1-202ENSMUST00000090095 4156 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Trim3Q9R1R2 Olfr291-202ENSMUST00000217039 3471 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
Trim3Q9R1R2 Gpr21-201ENSMUST00000065441 3619 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Trim3Q9R1R2 Olfr328-202ENSMUST00000108824 1199 ntAPPRIS P1 TSL 3 BASIC4.53□□□□□ -1.68
Trim3Q9R1R2 Gm12638-201ENSMUST00000119531 298 ntBASIC4.53□□□□□ -1.68
Trim3Q9R1R2 Tnfaip8-203ENSMUST00000126666 906 ntTSL 2 BASIC4.53□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 65.5 ms