Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm37345-201ENSMUST00000193062 3138 ntBASIC4.53□□□□□ -1.68
Lima1Q9ERG0 Vmn2r-ps120-201ENSMUST00000176341 2409 ntBASIC4.53□□□□□ -1.68
Lima1Q9ERG0 Gm36529-201ENSMUST00000222495 1529 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Lima1Q9ERG0 Olfr995-202ENSMUST00000216933 1706 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Lima1Q9ERG0 Defb30-202ENSMUST00000111207 989 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
Lima1Q9ERG0 Gm12062-201ENSMUST00000117533 259 ntBASIC4.53□□□□□ -1.68
Lima1Q9ERG0 Gm14706-201ENSMUST00000117744 255 ntBASIC4.53□□□□□ -1.68
Lima1Q9ERG0 Gm11346-201ENSMUST00000118346 704 ntBASIC4.53□□□□□ -1.68
Lima1Q9ERG0 Gm12808-201ENSMUST00000120597 404 ntBASIC4.53□□□□□ -1.68
Lima1Q9ERG0 Gm11894-201ENSMUST00000121579 328 ntBASIC4.53□□□□□ -1.68
Lima1Q9ERG0 Gm12609-201ENSMUST00000129908 610 ntTSL 2 BASIC4.53□□□□□ -1.68
Lima1Q9ERG0 Gm26153-201ENSMUST00000157433 127 ntBASIC4.53□□□□□ -1.68
Lima1Q9ERG0 Gm22940-201ENSMUST00000158560 155 ntBASIC4.53□□□□□ -1.68
Lima1Q9ERG0 Gm15795-201ENSMUST00000160969 553 ntBASIC4.53□□□□□ -1.68
Lima1Q9ERG0 Rab26os-201ENSMUST00000176215 477 ntBASIC4.53□□□□□ -1.68
Lima1Q9ERG0 1500004A13Rik-206ENSMUST00000184170 576 ntTSL 3 BASIC4.53□□□□□ -1.68
Lima1Q9ERG0 Olfr1391-201ENSMUST00000187509 938 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Lima1Q9ERG0 Gm43342-201ENSMUST00000201027 924 ntTSL 3 BASIC4.53□□□□□ -1.68
Lima1Q9ERG0 AC122464.1-201ENSMUST00000202789 770 ntBASIC4.53□□□□□ -1.68
Lima1Q9ERG0 Kap-202ENSMUST00000203168 464 ntAPPRIS ALT2 TSL 3 BASIC4.53□□□□□ -1.68
Lima1Q9ERG0 AC145731.1-201ENSMUST00000214083 344 ntTSL 5 BASIC4.53□□□□□ -1.68
Lima1Q9ERG0 AC174776.1-201ENSMUST00000221509 405 ntBASIC4.53□□□□□ -1.68
Lima1Q9ERG0 AC174776.2-201ENSMUST00000222561 405 ntBASIC4.53□□□□□ -1.68
Lima1Q9ERG0 AC139294.1-201ENSMUST00000226708 571 ntBASIC4.53□□□□□ -1.68
Lima1Q9ERG0 Ccl11-201ENSMUST00000000342 1082 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Lima1Q9ERG0 Meig1-201ENSMUST00000064685 706 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Lima1Q9ERG0 Olfr1202-201ENSMUST00000072057 930 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Lima1Q9ERG0 Gm25140-201ENSMUST00000083254 140 ntBASIC4.53□□□□□ -1.68
Lima1Q9ERG0 Mir504-201ENSMUST00000093602 79 ntBASIC4.53□□□□□ -1.68
Lima1Q9ERG0 Trpc5os-201ENSMUST00000155206 3585 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Lima1Q9ERG0 Ckap5-204ENSMUST00000111338 6665 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Lima1Q9ERG0 Olfr391-ps-201ENSMUST00000214485 2080 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
Lima1Q9ERG0 Gm45223-201ENSMUST00000207037 5138 ntBASIC4.53□□□□□ -1.68
Lima1Q9ERG0 Gm20139-202ENSMUST00000216041 3888 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Lima1Q9ERG0 Zfp808-201ENSMUST00000099449 2571 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Lima1Q9ERG0 Rab30-201ENSMUST00000032879 9456 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Lima1Q9ERG0 Gm14806-201ENSMUST00000116606 2110 ntBASIC4.52□□□□□ -1.69
Lima1Q9ERG0 Pramel5-201ENSMUST00000035757 2147 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Lima1Q9ERG0 Neat1-201ENSMUST00000173672 20771 ntBASIC4.52□□□□□ -1.69
Lima1Q9ERG0 AC156025.1-201ENSMUST00000223597 3551 ntBASIC4.52□□□□□ -1.69
Lima1Q9ERG0 Gm28488-203ENSMUST00000188792 1498 ntTSL 5 BASIC4.52□□□□□ -1.69
Lima1Q9ERG0 Gm42615-201ENSMUST00000197704 1820 ntBASIC4.52□□□□□ -1.69
Lima1Q9ERG0 Trappc1-203ENSMUST00000102602 751 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
Lima1Q9ERG0 Igkv6-15-201ENSMUST00000103393 347 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Lima1Q9ERG0 Macrod2-203ENSMUST00000110061 887 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Lima1Q9ERG0 Gm8145-201ENSMUST00000118220 745 ntBASIC4.52□□□□□ -1.69
Lima1Q9ERG0 Rpl23a-ps14-201ENSMUST00000118777 424 ntBASIC4.52□□□□□ -1.69
Lima1Q9ERG0 Rps18-ps2-201ENSMUST00000119493 398 ntBASIC4.52□□□□□ -1.69
Lima1Q9ERG0 Olfr1274-ps-201ENSMUST00000120681 1035 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Lima1Q9ERG0 Gm14784-201ENSMUST00000121604 663 ntBASIC4.52□□□□□ -1.69
Lima1Q9ERG0 2210408F21Rik-202ENSMUST00000124811 384 ntTSL 2 BASIC4.52□□□□□ -1.69
Lima1Q9ERG0 Ctla2b-202ENSMUST00000171347 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
Lima1Q9ERG0 Nutf2-ps2-201ENSMUST00000179225 384 ntBASIC4.52□□□□□ -1.69
Lima1Q9ERG0 Gm28083-201ENSMUST00000186533 538 ntTSL 5 BASIC4.52□□□□□ -1.69
Lima1Q9ERG0 4930540E01Rik-201ENSMUST00000192569 1146 ntBASIC4.52□□□□□ -1.69
Lima1Q9ERG0 Gm37881-201ENSMUST00000193001 421 ntBASIC4.52□□□□□ -1.69
Lima1Q9ERG0 Gm43344-201ENSMUST00000198723 1229 ntBASIC4.52□□□□□ -1.69
Lima1Q9ERG0 Gm43925-201ENSMUST00000203498 206 ntBASIC4.52□□□□□ -1.69
Lima1Q9ERG0 Snhg1-205ENSMUST00000205825 495 ntTSL 3 BASIC4.52□□□□□ -1.69
Lima1Q9ERG0 Gm18127-201ENSMUST00000208479 725 ntBASIC4.52□□□□□ -1.69
Lima1Q9ERG0 Gm45086-201ENSMUST00000209052 462 ntTSL 5 BASIC4.52□□□□□ -1.69
Lima1Q9ERG0 Gm30676-201ENSMUST00000214000 1165 ntTSL 5 BASIC4.52□□□□□ -1.69
Lima1Q9ERG0 Olfr27-201ENSMUST00000214052 1076 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
Lima1Q9ERG0 Gm7439-201ENSMUST00000214053 835 ntBASIC4.52□□□□□ -1.69
Lima1Q9ERG0 Gm6562-201ENSMUST00000221903 464 ntBASIC4.52□□□□□ -1.69
Lima1Q9ERG0 AC131745.2-201ENSMUST00000225736 565 ntBASIC4.52□□□□□ -1.69
Lima1Q9ERG0 Vmn1r214-201ENSMUST00000074252 1227 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Lima1Q9ERG0 AC102431.1-201ENSMUST00000223773 1449 ntBASIC4.52□□□□□ -1.69
Lima1Q9ERG0 Zfp101-204ENSMUST00000174512 3743 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Lima1Q9ERG0 Gm37397-201ENSMUST00000194579 2842 ntBASIC4.52□□□□□ -1.69
Lima1Q9ERG0 Gm13712-201ENSMUST00000117484 2295 ntBASIC4.52□□□□□ -1.69
Lima1Q9ERG0 Gm28168-201ENSMUST00000191265 2630 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Lima1Q9ERG0 C430019N01Rik-201ENSMUST00000199517 1567 ntBASIC4.52□□□□□ -1.69
Lima1Q9ERG0 Scel-201ENSMUST00000095576 2424 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
Lima1Q9ERG0 Gm44283-201ENSMUST00000204461 3950 ntBASIC4.52□□□□□ -1.69
Lima1Q9ERG0 Gm10330-201ENSMUST00000072014 1354 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Lima1Q9ERG0 2610002M06Rik-201ENSMUST00000120722 5842 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Lima1Q9ERG0 Cep290-206ENSMUST00000219765 7985 ntTSL 5 BASIC4.51□□□□□ -1.69
Lima1Q9ERG0 Adgrg2-201ENSMUST00000112398 3418 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
Lima1Q9ERG0 Gm29048-202ENSMUST00000190399 1601 ntTSL 5 BASIC4.51□□□□□ -1.69
Lima1Q9ERG0 Slfn8-202ENSMUST00000092838 3529 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Lima1Q9ERG0 Gm37412-201ENSMUST00000194866 4321 ntBASIC4.51□□□□□ -1.69
Lima1Q9ERG0 Gm13386-201ENSMUST00000117677 124 ntBASIC4.51□□□□□ -1.69
Lima1Q9ERG0 Gm16179-201ENSMUST00000120685 373 ntBASIC4.51□□□□□ -1.69
Lima1Q9ERG0 Gm15267-201ENSMUST00000120888 464 ntBASIC4.51□□□□□ -1.69
Lima1Q9ERG0 Gm16189-201ENSMUST00000123707 997 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Lima1Q9ERG0 A630023P12Rik-204ENSMUST00000142879 524 ntTSL 3 BASIC4.51□□□□□ -1.69
Lima1Q9ERG0 Gm16365-204ENSMUST00000143877 779 ntTSL 2 BASIC4.51□□□□□ -1.69
Lima1Q9ERG0 Gm22968-201ENSMUST00000157955 118 ntBASIC4.51□□□□□ -1.69
Lima1Q9ERG0 Dnaja1-ps-201ENSMUST00000162103 642 ntBASIC4.51□□□□□ -1.69
Lima1Q9ERG0 Mir6344-201ENSMUST00000183462 104 ntBASIC4.51□□□□□ -1.69
Lima1Q9ERG0 Gm29596-201ENSMUST00000185710 385 ntBASIC4.51□□□□□ -1.69
Lima1Q9ERG0 Gm3145-201ENSMUST00000188584 220 ntBASIC4.51□□□□□ -1.69
Lima1Q9ERG0 Gm5511-201ENSMUST00000189380 802 ntBASIC4.51□□□□□ -1.69
Lima1Q9ERG0 Gm35216-201ENSMUST00000203777 433 ntTSL 2 BASIC4.51□□□□□ -1.69
Lima1Q9ERG0 Gm45200-201ENSMUST00000207434 919 ntBASIC4.51□□□□□ -1.69
Lima1Q9ERG0 AC166263.1-201ENSMUST00000218586 238 ntBASIC4.51□□□□□ -1.69
Lima1Q9ERG0 AC131100.2-201ENSMUST00000227701 998 ntBASIC4.51□□□□□ -1.69
Lima1Q9ERG0 AC146601.1-201ENSMUST00000227910 905 ntBASIC4.51□□□□□ -1.69
Lima1Q9ERG0 Olfr493-201ENSMUST00000080106 945 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 90.9 ms