Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm25103-201ENSMUST00000122671 318 ntBASIC4.45□□□□□ -1.7
Cdc40Q9DC48 Gm3757-201ENSMUST00000125878 675 ntBASIC4.45□□□□□ -1.7
Cdc40Q9DC48 Gm14003-201ENSMUST00000130919 313 ntTSL 3 BASIC4.45□□□□□ -1.7
Cdc40Q9DC48 1810065E05Rik-201ENSMUST00000013797 926 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Cdc40Q9DC48 Gm25278-201ENSMUST00000157267 120 ntBASIC4.45□□□□□ -1.7
Cdc40Q9DC48 Gm25271-201ENSMUST00000157273 290 ntBASIC4.45□□□□□ -1.7
Cdc40Q9DC48 Trbv10-201ENSMUST00000168322 289 ntBASIC4.45□□□□□ -1.7
Cdc40Q9DC48 Prl5a1-201ENSMUST00000017208 1061 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Cdc40Q9DC48 Gm16430-202ENSMUST00000178145 703 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Cdc40Q9DC48 Spin2-ps6-201ENSMUST00000178459 525 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Cdc40Q9DC48 Gm16405-202ENSMUST00000180150 703 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Cdc40Q9DC48 Rian-217ENSMUST00000183266 687 ntTSL 3 BASIC4.45□□□□□ -1.7
Cdc40Q9DC48 Gm9320-201ENSMUST00000184151 473 ntBASIC4.45□□□□□ -1.7
Cdc40Q9DC48 Gm28129-201ENSMUST00000186273 537 ntTSL 5 BASIC4.45□□□□□ -1.7
Cdc40Q9DC48 Gm29475-201ENSMUST00000190767 312 ntBASIC4.45□□□□□ -1.7
Cdc40Q9DC48 Gm38166-201ENSMUST00000191660 471 ntBASIC4.45□□□□□ -1.7
Cdc40Q9DC48 Gm18843-201ENSMUST00000194982 719 ntBASIC4.45□□□□□ -1.7
Cdc40Q9DC48 Rnu3a-202ENSMUST00000196710 213 ntBASIC4.45□□□□□ -1.7
Cdc40Q9DC48 AC153897.1-201ENSMUST00000213510 470 ntTSL 3 BASIC4.45□□□□□ -1.7
Cdc40Q9DC48 AC109180.1-201ENSMUST00000218676 398 ntBASIC4.45□□□□□ -1.7
Cdc40Q9DC48 CT030030.1-201ENSMUST00000218809 152 ntBASIC4.45□□□□□ -1.7
Cdc40Q9DC48 9530050K03Rik-201ENSMUST00000221663 1299 ntBASIC4.45□□□□□ -1.7
Cdc40Q9DC48 AC131117.2-203ENSMUST00000225886 950 ntBASIC4.45□□□□□ -1.7
Cdc40Q9DC48 CT025548.1-201ENSMUST00000227459 257 ntBASIC4.45□□□□□ -1.7
Cdc40Q9DC48 Spata19-201ENSMUST00000034473 697 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
Cdc40Q9DC48 Rnu3a-201ENSMUST00000083936 214 ntBASIC4.45□□□□□ -1.7
Cdc40Q9DC48 4930567H17Rik-201ENSMUST00000092405 840 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Cdc40Q9DC48 Olfr143-201ENSMUST00000093865 942 ntAPPRIS P2 BASIC4.45□□□□□ -1.7
Cdc40Q9DC48 A730046J19Rik-201ENSMUST00000135687 4707 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Cdc40Q9DC48 Pde1a-204ENSMUST00000102653 2439 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Cdc40Q9DC48 Vmn2r-ps123-201ENSMUST00000176763 2410 ntBASIC4.45□□□□□ -1.7
Cdc40Q9DC48 Gm18189-201ENSMUST00000218153 1951 ntBASIC4.45□□□□□ -1.7
Cdc40Q9DC48 Olfr183-203ENSMUST00000213465 2200 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Cdc40Q9DC48 Olfr183-205ENSMUST00000214916 2249 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Cdc40Q9DC48 Zfp329-202ENSMUST00000108546 2577 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Cdc40Q9DC48 Msr1-202ENSMUST00000170091 3636 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Cdc40Q9DC48 Olfr1000-203ENSMUST00000216571 2028 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Cdc40Q9DC48 Ms4a7-201ENSMUST00000025574 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
Cdc40Q9DC48 Olfr887-202ENSMUST00000212502 6281 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Cdc40Q9DC48 Adam7-201ENSMUST00000022640 3469 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Cdc40Q9DC48 Gm28832-201ENSMUST00000188603 1498 ntTSL 5 BASIC4.44□□□□□ -1.7
Cdc40Q9DC48 Acsm3-204ENSMUST00000106528 2755 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Cdc40Q9DC48 Gm43185-201ENSMUST00000197507 2775 ntBASIC4.44□□□□□ -1.7
Cdc40Q9DC48 Vmn1r43-205ENSMUST00000228709 12646 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Cdc40Q9DC48 Zfp808-204ENSMUST00000221772 1379 ntTSL 5 BASIC4.44□□□□□ -1.7
Cdc40Q9DC48 1700061I17Rik-201ENSMUST00000029642 1962 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Cdc40Q9DC48 Iglv2-201ENSMUST00000103752 348 ntAPPRIS ALT2 BASIC4.44□□□□□ -1.7
Cdc40Q9DC48 Casp8ap2-202ENSMUST00000108178 1189 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
Cdc40Q9DC48 Gm11633-201ENSMUST00000118176 444 ntBASIC4.44□□□□□ -1.7
Cdc40Q9DC48 Olfr1149-ps1-201ENSMUST00000118232 691 ntBASIC4.44□□□□□ -1.7
Cdc40Q9DC48 Gm12237-201ENSMUST00000120158 470 ntBASIC4.44□□□□□ -1.7
Cdc40Q9DC48 Gm12288-201ENSMUST00000121054 1282 ntBASIC4.44□□□□□ -1.7
Cdc40Q9DC48 Ccdc34os-201ENSMUST00000123633 979 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Cdc40Q9DC48 Gm22084-201ENSMUST00000157585 105 ntBASIC4.44□□□□□ -1.7
Cdc40Q9DC48 Gm25665-201ENSMUST00000157695 110 ntBASIC4.44□□□□□ -1.7
Cdc40Q9DC48 Gm8374-201ENSMUST00000163826 672 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Cdc40Q9DC48 Gm7976-201ENSMUST00000181507 1242 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Cdc40Q9DC48 Gm19585-201ENSMUST00000186007 587 ntTSL 2 BASIC4.44□□□□□ -1.7
Cdc40Q9DC48 Gm28975-201ENSMUST00000186412 686 ntBASIC4.44□□□□□ -1.7
Cdc40Q9DC48 Gm28097-201ENSMUST00000187333 366 ntBASIC4.44□□□□□ -1.7
Cdc40Q9DC48 Gm29538-201ENSMUST00000190783 471 ntTSL 2 BASIC4.44□□□□□ -1.7
Cdc40Q9DC48 Rps27a-ps1-201ENSMUST00000191424 463 ntBASIC4.44□□□□□ -1.7
Cdc40Q9DC48 Ralyl-205ENSMUST00000192209 662 ntTSL 3 BASIC4.44□□□□□ -1.7
Cdc40Q9DC48 Gm36638-201ENSMUST00000193295 400 ntBASIC4.44□□□□□ -1.7
Cdc40Q9DC48 Gm38163-201ENSMUST00000194112 482 ntTSL 5 BASIC4.44□□□□□ -1.7
Cdc40Q9DC48 Gm9238-201ENSMUST00000196181 329 ntBASIC4.44□□□□□ -1.7
Cdc40Q9DC48 Gm30043-201ENSMUST00000196689 733 ntTSL 2 BASIC4.44□□□□□ -1.7
Cdc40Q9DC48 8030487O14Rik-201ENSMUST00000200244 903 ntBASIC4.44□□□□□ -1.7
Cdc40Q9DC48 Gm43309-201ENSMUST00000200837 458 ntBASIC4.44□□□□□ -1.7
Cdc40Q9DC48 Gm34583-202ENSMUST00000202537 451 ntTSL 2 BASIC4.44□□□□□ -1.7
Cdc40Q9DC48 Fxyd1-210ENSMUST00000206012 501 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Cdc40Q9DC48 Gm19096-201ENSMUST00000209705 766 ntBASIC4.44□□□□□ -1.7
Cdc40Q9DC48 Gm45261-201ENSMUST00000211023 594 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Cdc40Q9DC48 Gm31786-202ENSMUST00000212428 676 ntTSL 3 BASIC4.44□□□□□ -1.7
Cdc40Q9DC48 CAAA01216754.4-201ENSMUST00000216416 802 ntTSL 5 BASIC4.44□□□□□ -1.7
Cdc40Q9DC48 Aoah-202ENSMUST00000221982 919 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Cdc40Q9DC48 AC154709.1-201ENSMUST00000222304 446 ntTSL 3 BASIC4.44□□□□□ -1.7
Cdc40Q9DC48 Pglyrp3-201ENSMUST00000047660 1107 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Cdc40Q9DC48 Mup14-201ENSMUST00000071005 652 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
Cdc40Q9DC48 Gm5458-201ENSMUST00000096121 997 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
Cdc40Q9DC48 Glcci1-203ENSMUST00000161494 3248 ntTSL 2 BASIC4.44□□□□□ -1.7
Cdc40Q9DC48 Vmn1r58-201ENSMUST00000108569 10140 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Cdc40Q9DC48 Gm15170-201ENSMUST00000121593 2023 ntBASIC4.44□□□□□ -1.7
Cdc40Q9DC48 AC127371.2-201ENSMUST00000228108 1933 ntBASIC4.44□□□□□ -1.7
Cdc40Q9DC48 Olfr1348-207ENSMUST00000209029 2696 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Cdc40Q9DC48 AC165106.3-201ENSMUST00000228191 3843 ntBASIC4.44□□□□□ -1.7
Cdc40Q9DC48 Pdc-202ENSMUST00000185698 3335 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Cdc40Q9DC48 AC151904.4-201ENSMUST00000219868 1319 ntBASIC4.44□□□□□ -1.7
Cdc40Q9DC48 Olfr1300-ps1-201ENSMUST00000208175 2235 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Cdc40Q9DC48 Olfr1195-202ENSMUST00000213545 2585 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Cdc40Q9DC48 Gm28964-202ENSMUST00000186771 1502 ntTSL 5 BASIC4.43□□□□□ -1.7
Cdc40Q9DC48 Gm29301-202ENSMUST00000189344 1502 ntTSL 5 BASIC4.43□□□□□ -1.7
Cdc40Q9DC48 Olfr1280-203ENSMUST00000219291 6883 ntAPPRIS P1 TSL 3 BASIC4.43□□□□□ -1.7
Cdc40Q9DC48 Olfr1043-202ENSMUST00000213886 1675 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Cdc40Q9DC48 Gm13321-201ENSMUST00000117101 400 ntBASIC4.43□□□□□ -1.7
Cdc40Q9DC48 Gm12285-201ENSMUST00000117347 233 ntBASIC4.43□□□□□ -1.7
Cdc40Q9DC48 Olfr1159-ps1-201ENSMUST00000117651 913 ntBASIC4.43□□□□□ -1.7
Cdc40Q9DC48 Gm11196-201ENSMUST00000119052 395 ntBASIC4.43□□□□□ -1.7
Cdc40Q9DC48 Gm16189-201ENSMUST00000123707 997 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Cdc40Q9DC48 Gm12249-201ENSMUST00000132323 719 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 70.8 ms