Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 1700017N19Rik-210ENSMUST00000218464 1597 ntTSL 5 BASIC5.42□□□□□ -1.54
Smc1aQ9CU62 Olfr699-203ENSMUST00000216307 4193 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Smc1aQ9CU62 Olfr50-202ENSMUST00000216753 4531 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Smc1aQ9CU62 Gm10521-201ENSMUST00000097466 2574 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Smc1aQ9CU62 Zfp143-201ENSMUST00000084727 3003 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Smc1aQ9CU62 Olfr1049-202ENSMUST00000216185 1471 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Smc1aQ9CU62 Olfr372-202ENSMUST00000215324 3542 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Smc1aQ9CU62 Olfr1297-202ENSMUST00000213398 6998 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
Smc1aQ9CU62 Gm2004-201ENSMUST00000109049 1749 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Smc1aQ9CU62 Gm14419-202ENSMUST00000126358 1749 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Smc1aQ9CU62 Gm43784-201ENSMUST00000202922 2436 ntBASIC5.41□□□□□ -1.54
Smc1aQ9CU62 Gm22468-201ENSMUST00000116680 120 ntBASIC5.41□□□□□ -1.54
Smc1aQ9CU62 Gm26248-201ENSMUST00000116700 121 ntBASIC5.41□□□□□ -1.54
Smc1aQ9CU62 Gm26137-201ENSMUST00000116701 121 ntBASIC5.41□□□□□ -1.54
Smc1aQ9CU62 Gm26190-201ENSMUST00000116704 121 ntBASIC5.41□□□□□ -1.54
Smc1aQ9CU62 Gm24617-201ENSMUST00000116705 121 ntBASIC5.41□□□□□ -1.54
Smc1aQ9CU62 Gm25778-201ENSMUST00000116713 121 ntBASIC5.41□□□□□ -1.54
Smc1aQ9CU62 Gm25774-201ENSMUST00000116717 121 ntBASIC5.41□□□□□ -1.54
Smc1aQ9CU62 Gm22102-201ENSMUST00000116730 121 ntBASIC5.41□□□□□ -1.54
Smc1aQ9CU62 Gm23177-201ENSMUST00000116784 121 ntBASIC5.41□□□□□ -1.54
Smc1aQ9CU62 Gm24193-201ENSMUST00000116801 121 ntBASIC5.41□□□□□ -1.54
Smc1aQ9CU62 Gm24744-201ENSMUST00000116833 121 ntBASIC5.41□□□□□ -1.54
Smc1aQ9CU62 Gm24427-201ENSMUST00000116896 121 ntBASIC5.41□□□□□ -1.54
Smc1aQ9CU62 Gm22346-201ENSMUST00000116918 121 ntBASIC5.41□□□□□ -1.54
Smc1aQ9CU62 Gm23606-201ENSMUST00000116938 121 ntBASIC5.41□□□□□ -1.54
Smc1aQ9CU62 Gm22029-201ENSMUST00000116940 121 ntBASIC5.41□□□□□ -1.54
Smc1aQ9CU62 Gm26298-201ENSMUST00000116956 121 ntBASIC5.41□□□□□ -1.54
Smc1aQ9CU62 Gm23844-201ENSMUST00000116959 121 ntBASIC5.41□□□□□ -1.54
Smc1aQ9CU62 Gm24484-201ENSMUST00000117009 121 ntBASIC5.41□□□□□ -1.54
Smc1aQ9CU62 Gm25347-201ENSMUST00000117026 121 ntBASIC5.41□□□□□ -1.54
Smc1aQ9CU62 Gm22112-201ENSMUST00000117032 121 ntBASIC5.41□□□□□ -1.54
Smc1aQ9CU62 Gm11510-201ENSMUST00000120278 347 ntBASIC5.41□□□□□ -1.54
Smc1aQ9CU62 Tnfaip8-203ENSMUST00000126666 906 ntTSL 2 BASIC5.41□□□□□ -1.54
Smc1aQ9CU62 Gm11844-201ENSMUST00000129207 459 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Smc1aQ9CU62 1810065E05Rik-201ENSMUST00000013797 926 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Smc1aQ9CU62 Gm13180-201ENSMUST00000141222 440 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Smc1aQ9CU62 Gm24690-201ENSMUST00000157759 97 ntBASIC5.41□□□□□ -1.54
Smc1aQ9CU62 Gm24188-201ENSMUST00000157980 108 ntBASIC5.41□□□□□ -1.54
Smc1aQ9CU62 Gm25907-201ENSMUST00000158486 125 ntBASIC5.41□□□□□ -1.54
Smc1aQ9CU62 Gm26404-201ENSMUST00000158498 109 ntBASIC5.41□□□□□ -1.54
Smc1aQ9CU62 B230216N24Rik-204ENSMUST00000161661 719 ntTSL 2 BASIC5.41□□□□□ -1.54
Smc1aQ9CU62 Vmn1r116-201ENSMUST00000164288 924 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Smc1aQ9CU62 Vmn1r152-201ENSMUST00000168326 924 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Smc1aQ9CU62 Vmn1r95-201ENSMUST00000168984 924 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Smc1aQ9CU62 Vmn1r104-201ENSMUST00000169689 924 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Smc1aQ9CU62 Vmn1r155-201ENSMUST00000177632 924 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Smc1aQ9CU62 Vmn1r148-201ENSMUST00000177774 924 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Smc1aQ9CU62 Vmn1r100-201ENSMUST00000177815 924 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Smc1aQ9CU62 Vmn1r137-201ENSMUST00000177884 924 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Smc1aQ9CU62 Vmn1r130-201ENSMUST00000177936 924 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Smc1aQ9CU62 Gm22991-201ENSMUST00000178126 121 ntBASIC5.41□□□□□ -1.54
Smc1aQ9CU62 Gm25754-201ENSMUST00000178653 121 ntBASIC5.41□□□□□ -1.54
Smc1aQ9CU62 Gm22419-201ENSMUST00000178780 121 ntBASIC5.41□□□□□ -1.54
Smc1aQ9CU62 Gm24802-201ENSMUST00000178897 121 ntBASIC5.41□□□□□ -1.54
Smc1aQ9CU62 Gm25208-201ENSMUST00000178964 121 ntBASIC5.41□□□□□ -1.54
Smc1aQ9CU62 Vmn1r107-201ENSMUST00000179079 924 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Smc1aQ9CU62 Gm24567-201ENSMUST00000179294 121 ntBASIC5.41□□□□□ -1.54
Smc1aQ9CU62 Vmn1r165-201ENSMUST00000179594 924 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Smc1aQ9CU62 Gm23943-201ENSMUST00000179712 121 ntBASIC5.41□□□□□ -1.54
Smc1aQ9CU62 Gm25228-201ENSMUST00000180121 121 ntBASIC5.41□□□□□ -1.54
Smc1aQ9CU62 Gm23304-201ENSMUST00000180209 121 ntBASIC5.41□□□□□ -1.54
Smc1aQ9CU62 Gm18828-202ENSMUST00000181035 310 ntBASIC5.41□□□□□ -1.54
Smc1aQ9CU62 Gm26683-201ENSMUST00000181737 470 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Smc1aQ9CU62 Gm5285-201ENSMUST00000193089 666 ntBASIC5.41□□□□□ -1.54
Smc1aQ9CU62 Minpp1-ps-201ENSMUST00000203344 946 ntBASIC5.41□□□□□ -1.54
Smc1aQ9CU62 Gm45910-201ENSMUST00000212493 1003 ntBASIC5.41□□□□□ -1.54
Smc1aQ9CU62 AC164624.1-201ENSMUST00000219148 1025 ntTSL 5 BASIC5.41□□□□□ -1.54
Smc1aQ9CU62 Gm34983-201ENSMUST00000219484 396 ntTSL 3 BASIC5.41□□□□□ -1.54
Smc1aQ9CU62 Gm4057-201ENSMUST00000221407 368 ntBASIC5.41□□□□□ -1.54
Smc1aQ9CU62 AL589742.1-201ENSMUST00000226034 349 ntBASIC5.41□□□□□ -1.54
Smc1aQ9CU62 Olfr827-201ENSMUST00000058123 1058 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Smc1aQ9CU62 Gm6195-201ENSMUST00000063059 357 ntBASIC5.41□□□□□ -1.54
Smc1aQ9CU62 Olfr547-201ENSMUST00000098229 936 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Smc1aQ9CU62 Vmn1r125-201ENSMUST00000098739 924 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Smc1aQ9CU62 Gm18189-201ENSMUST00000218153 1951 ntBASIC5.41□□□□□ -1.54
Smc1aQ9CU62 Vmn1r39-203ENSMUST00000227285 2245 ntAPPRIS ALT2 BASIC5.41□□□□□ -1.54
Smc1aQ9CU62 4932411N23Rik-201ENSMUST00000081074 3407 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Smc1aQ9CU62 Ogt-201ENSMUST00000044475 5384 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
Smc1aQ9CU62 Elavl4-204ENSMUST00000106598 3997 ntAPPRIS ALT1 TSL 5 BASIC5.41□□□□□ -1.54
Smc1aQ9CU62 AC151904.4-201ENSMUST00000219868 1319 ntBASIC5.41□□□□□ -1.54
Smc1aQ9CU62 Ptprd-203ENSMUST00000098005 4542 ntTSL 5 BASIC5.41□□□□□ -1.54
Smc1aQ9CU62 Olfr59-201ENSMUST00000143976 3088 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
Smc1aQ9CU62 Gm37562-201ENSMUST00000194763 4328 ntBASIC5.41□□□□□ -1.54
Smc1aQ9CU62 Olfr1312-203ENSMUST00000213961 5345 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Smc1aQ9CU62 Ccr9-204ENSMUST00000168910 2888 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Smc1aQ9CU62 Sirpb1a-201ENSMUST00000099201 1419 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
Smc1aQ9CU62 Gm15592-201ENSMUST00000143135 1707 ntTSL 3 BASIC5.4□□□□□ -1.54
Smc1aQ9CU62 F13a1-201ENSMUST00000037491 3952 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Smc1aQ9CU62 Zfp874b-201ENSMUST00000019572 3744 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.54
Smc1aQ9CU62 Trim12c-201ENSMUST00000059037 3740 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Smc1aQ9CU62 Cyp4a31-201ENSMUST00000030480 2396 ntTSL 2 BASIC5.4□□□□□ -1.54
Smc1aQ9CU62 Gm34885-201ENSMUST00000217440 4070 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Smc1aQ9CU62 Vmn1r32-202ENSMUST00000227014 2661 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Smc1aQ9CU62 Mir92b-201ENSMUST00000102300 83 ntBASIC5.4□□□□□ -1.54
Smc1aQ9CU62 Iglv2-201ENSMUST00000103752 348 ntAPPRIS ALT2 BASIC5.4□□□□□ -1.54
Smc1aQ9CU62 Gm13491-201ENSMUST00000118267 235 ntBASIC5.4□□□□□ -1.54
Smc1aQ9CU62 Gm11584-201ENSMUST00000120636 325 ntBASIC5.4□□□□□ -1.54
Smc1aQ9CU62 4930405D11Rik-201ENSMUST00000132218 568 ntTSL 3 BASIC5.4□□□□□ -1.54
Smc1aQ9CU62 Gm15905-201ENSMUST00000137042 298 ntBASIC5.4□□□□□ -1.54
Smc1aQ9CU62 Gm15687-201ENSMUST00000141440 269 ntTSL 3 BASIC5.4□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 109.2 ms