Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Gm14410-202ENSMUST00000133301 1113 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
Cstf1Q99LC2 Gm24961-201ENSMUST00000157918 184 ntBASIC4.86□□□□□ -1.63
Cstf1Q99LC2 Vmn1r-ps77-201ENSMUST00000174184 921 ntBASIC4.86□□□□□ -1.63
Cstf1Q99LC2 Vmn1r-ps75-201ENSMUST00000174316 920 ntBASIC4.86□□□□□ -1.63
Cstf1Q99LC2 Gm16456-201ENSMUST00000174431 920 ntBASIC4.86□□□□□ -1.63
Cstf1Q99LC2 Gm11007-201ENSMUST00000177700 195 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Cstf1Q99LC2 Gm2007-201ENSMUST00000177981 195 ntTSL 5 BASIC4.86□□□□□ -1.63
Cstf1Q99LC2 Gm2004-203ENSMUST00000179349 195 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Cstf1Q99LC2 9130024F11Rik-203ENSMUST00000187858 447 ntTSL 2 BASIC4.86□□□□□ -1.63
Cstf1Q99LC2 Gm43717-201ENSMUST00000198684 310 ntBASIC4.86□□□□□ -1.63
Cstf1Q99LC2 Gm43645-201ENSMUST00000200129 341 ntTSL 2 BASIC4.86□□□□□ -1.63
Cstf1Q99LC2 Gm44009-201ENSMUST00000203539 521 ntTSL 5 BASIC4.86□□□□□ -1.63
Cstf1Q99LC2 Gm44876-201ENSMUST00000205394 670 ntTSL 3 BASIC4.86□□□□□ -1.63
Cstf1Q99LC2 Gm45007-201ENSMUST00000206237 366 ntBASIC4.86□□□□□ -1.63
Cstf1Q99LC2 Gm45052-201ENSMUST00000206457 405 ntTSL 2 BASIC4.86□□□□□ -1.63
Cstf1Q99LC2 Gm32916-203ENSMUST00000208033 789 ntTSL 5 BASIC4.86□□□□□ -1.63
Cstf1Q99LC2 Gm45272-202ENSMUST00000209875 502 ntTSL 3 BASIC4.86□□□□□ -1.63
Cstf1Q99LC2 Gm21112-201ENSMUST00000212224 578 ntBASIC4.86□□□□□ -1.63
Cstf1Q99LC2 Gm7760-201ENSMUST00000212265 578 ntBASIC4.86□□□□□ -1.63
Cstf1Q99LC2 Gm31786-202ENSMUST00000212428 676 ntTSL 3 BASIC4.86□□□□□ -1.63
Cstf1Q99LC2 Gm7807-201ENSMUST00000212475 578 ntBASIC4.86□□□□□ -1.63
Cstf1Q99LC2 Gm5750-201ENSMUST00000218711 801 ntBASIC4.86□□□□□ -1.63
Cstf1Q99LC2 AC156790.5-201ENSMUST00000227075 231 ntBASIC4.86□□□□□ -1.63
Cstf1Q99LC2 Ms4a2-201ENSMUST00000025583 1211 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Cstf1Q99LC2 Olfr957-201ENSMUST00000051653 936 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Cstf1Q99LC2 Gm43085-201ENSMUST00000202859 3132 ntBASIC4.86□□□□□ -1.63
Cstf1Q99LC2 Olfr1224-ps1-204ENSMUST00000216833 2294 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Cstf1Q99LC2 Tgif1-202ENSMUST00000118283 1388 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Cstf1Q99LC2 Emcn-201ENSMUST00000119475 1357 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
Cstf1Q99LC2 Gm30332-201ENSMUST00000204221 2345 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Cstf1Q99LC2 Gm43024-201ENSMUST00000196770 4352 ntBASIC4.86□□□□□ -1.63
Cstf1Q99LC2 Axdnd1-211ENSMUST00000213088 3561 ntAPPRIS P2 TSL 5 BASIC4.86□□□□□ -1.63
Cstf1Q99LC2 Capn6-201ENSMUST00000087316 3561 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Cstf1Q99LC2 Vmn1r217-202ENSMUST00000227110 9888 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Cstf1Q99LC2 Nfatc3-202ENSMUST00000211991 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
Cstf1Q99LC2 Arpp19-203ENSMUST00000166549 1747 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Cstf1Q99LC2 AC154573.1-201ENSMUST00000225913 4659 ntBASIC4.85□□□□□ -1.63
Cstf1Q99LC2 Olfr1308-202ENSMUST00000207560 2093 ntAPPRIS P1 TSL 3 BASIC4.85□□□□□ -1.63
Cstf1Q99LC2 Olfr1300-ps1-201ENSMUST00000208175 2235 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Cstf1Q99LC2 Gm44624-201ENSMUST00000208700 2278 ntBASIC4.85□□□□□ -1.63
Cstf1Q99LC2 Zfp426-201ENSMUST00000080386 2417 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
Cstf1Q99LC2 9630010A21Rik-201ENSMUST00000192348 2703 ntBASIC4.85□□□□□ -1.63
Cstf1Q99LC2 Gm24235-201ENSMUST00000104319 129 ntBASIC4.85□□□□□ -1.63
Cstf1Q99LC2 Gm14854-201ENSMUST00000117758 841 ntBASIC4.85□□□□□ -1.63
Cstf1Q99LC2 Gm12994-201ENSMUST00000119601 447 ntBASIC4.85□□□□□ -1.63
Cstf1Q99LC2 Gm12288-201ENSMUST00000121054 1282 ntBASIC4.85□□□□□ -1.63
Cstf1Q99LC2 Gm4912-201ENSMUST00000122212 1044 ntBASIC4.85□□□□□ -1.63
Cstf1Q99LC2 Rpl26-ps5-201ENSMUST00000122220 439 ntBASIC4.85□□□□□ -1.63
Cstf1Q99LC2 Gm11418-201ENSMUST00000156193 626 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Cstf1Q99LC2 Gm24745-201ENSMUST00000157840 85 ntBASIC4.85□□□□□ -1.63
Cstf1Q99LC2 Gm25861-201ENSMUST00000158251 109 ntBASIC4.85□□□□□ -1.63
Cstf1Q99LC2 4930570N18Rik-201ENSMUST00000159273 332 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Cstf1Q99LC2 Gm16055-201ENSMUST00000161366 626 ntTSL 2 BASIC4.85□□□□□ -1.63
Cstf1Q99LC2 Gm26871-204ENSMUST00000181310 523 ntTSL 3 BASIC4.85□□□□□ -1.63
Cstf1Q99LC2 Gm28967-201ENSMUST00000187351 281 ntBASIC4.85□□□□□ -1.63
Cstf1Q99LC2 1700084F23Rik-205ENSMUST00000191362 743 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Cstf1Q99LC2 Gm8823-201ENSMUST00000193158 433 ntBASIC4.85□□□□□ -1.63
Cstf1Q99LC2 Gm32554-201ENSMUST00000196310 970 ntTSL 5 BASIC4.85□□□□□ -1.63
Cstf1Q99LC2 Gm33962-202ENSMUST00000205195 630 ntTSL 5 BASIC4.85□□□□□ -1.63
Cstf1Q99LC2 Abca15-204ENSMUST00000207220 567 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Cstf1Q99LC2 Olfr712-ps1-201ENSMUST00000207690 950 ntBASIC4.85□□□□□ -1.63
Cstf1Q99LC2 Gm44690-201ENSMUST00000207984 382 ntBASIC4.85□□□□□ -1.63
Cstf1Q99LC2 Ormdl2-202ENSMUST00000217685 666 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Cstf1Q99LC2 AC132433.1-201ENSMUST00000221553 1101 ntBASIC4.85□□□□□ -1.63
Cstf1Q99LC2 Olfr699-201ENSMUST00000065024 951 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Cstf1Q99LC2 Olfr310-201ENSMUST00000081918 1082 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Cstf1Q99LC2 Gm23928-201ENSMUST00000082469 145 ntBASIC4.85□□□□□ -1.63
Cstf1Q99LC2 Gm26330-201ENSMUST00000082817 104 ntBASIC4.85□□□□□ -1.63
Cstf1Q99LC2 Olfr726-205ENSMUST00000215278 1324 ntAPPRIS P1 TSL 3 BASIC4.85□□□□□ -1.63
Cstf1Q99LC2 Nlgn1-202ENSMUST00000108308 4272 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
Cstf1Q99LC2 Gm21778-202ENSMUST00000185926 1482 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Cstf1Q99LC2 AC154184.1-201ENSMUST00000224375 1620 ntBASIC4.85□□□□□ -1.63
Cstf1Q99LC2 Vmn1r35-205ENSMUST00000227961 1789 ntBASIC4.85□□□□□ -1.63
Cstf1Q99LC2 Olfr819-202ENSMUST00000216322 3930 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
Cstf1Q99LC2 Apob-202ENSMUST00000037811 13934 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Cstf1Q99LC2 Acer3-201ENSMUST00000033020 11340 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Cstf1Q99LC2 Vmn1r173-202ENSMUST00000226233 9416 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Cstf1Q99LC2 Gm29112-201ENSMUST00000188962 3487 ntBASIC4.84□□□□□ -1.63
Cstf1Q99LC2 Havcr2-201ENSMUST00000020668 2721 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Cstf1Q99LC2 Zfp352-201ENSMUST00000080541 1656 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Cstf1Q99LC2 Pax6os1-202ENSMUST00000149133 1464 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Cstf1Q99LC2 Hormad1-204ENSMUST00000171191 1437 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
Cstf1Q99LC2 BB019430-202ENSMUST00000218015 1320 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Cstf1Q99LC2 Trbv20-201ENSMUST00000103277 335 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Cstf1Q99LC2 Igkv6-32-201ENSMUST00000103377 366 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Cstf1Q99LC2 Cetn2-202ENSMUST00000114550 1124 ntTSL 3 BASIC4.84□□□□□ -1.63
Cstf1Q99LC2 Gm12427-201ENSMUST00000117719 302 ntBASIC4.84□□□□□ -1.63
Cstf1Q99LC2 Gm14985-201ENSMUST00000118693 786 ntBASIC4.84□□□□□ -1.63
Cstf1Q99LC2 Gm14369-201ENSMUST00000121355 285 ntBASIC4.84□□□□□ -1.63
Cstf1Q99LC2 Gm20673-201ENSMUST00000177167 430 ntBASIC4.84□□□□□ -1.63
Cstf1Q99LC2 Gm27153-201ENSMUST00000184492 407 ntTSL 2 BASIC4.84□□□□□ -1.63
Cstf1Q99LC2 Gm3259-205ENSMUST00000185432 1077 ntTSL 3 BASIC4.84□□□□□ -1.63
Cstf1Q99LC2 Gm28660-201ENSMUST00000186496 253 ntBASIC4.84□□□□□ -1.63
Cstf1Q99LC2 Gm28786-201ENSMUST00000187228 172 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Cstf1Q99LC2 Trbv27-201ENSMUST00000193711 277 ntBASIC4.84□□□□□ -1.63
Cstf1Q99LC2 Gm37030-201ENSMUST00000194254 295 ntBASIC4.84□□□□□ -1.63
Cstf1Q99LC2 Gm19057-201ENSMUST00000194329 1197 ntBASIC4.84□□□□□ -1.63
Cstf1Q99LC2 Gm38221-201ENSMUST00000195146 365 ntBASIC4.84□□□□□ -1.63
Cstf1Q99LC2 Gm30043-201ENSMUST00000196689 733 ntTSL 2 BASIC4.84□□□□□ -1.63
Cstf1Q99LC2 Gm19131-201ENSMUST00000203408 789 ntBASIC4.84□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 69.7 ms