Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Gm10441-201ENSMUST00000200950 1546 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Ccdc28bQ8CEG5 Gm12051-201ENSMUST00000147771 1341 ntTSL 5 BASIC4.72□□□□□ -1.65
Ccdc28bQ8CEG5 Gm38505-201ENSMUST00000174005 1326 ntTSL 5 BASIC4.72□□□□□ -1.65
Ccdc28bQ8CEG5 Gm42436-201ENSMUST00000198804 3656 ntBASIC4.71□□□□□ -1.65
Ccdc28bQ8CEG5 Gm13477-201ENSMUST00000121620 2687 ntBASIC4.71□□□□□ -1.65
Ccdc28bQ8CEG5 Zfp329-201ENSMUST00000072222 6727 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
Ccdc28bQ8CEG5 Gm42455-201ENSMUST00000199761 2736 ntBASIC4.71□□□□□ -1.66
Ccdc28bQ8CEG5 Gm20515-201ENSMUST00000174440 4824 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Ccdc28bQ8CEG5 Dmd-201ENSMUST00000113991 4438 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Ccdc28bQ8CEG5 Gm22374-201ENSMUST00000104583 132 ntBASIC4.71□□□□□ -1.66
Ccdc28bQ8CEG5 Bpifc-202ENSMUST00000105304 451 ntTSL 5 BASIC4.71□□□□□ -1.66
Ccdc28bQ8CEG5 Znrd1-201ENSMUST00000113669 742 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Ccdc28bQ8CEG5 Gm11349-201ENSMUST00000122209 1116 ntBASIC4.71□□□□□ -1.66
Ccdc28bQ8CEG5 n-R5s45-201ENSMUST00000122592 110 ntBASIC4.71□□□□□ -1.66
Ccdc28bQ8CEG5 Klra13-ps-201ENSMUST00000125813 802 ntBASIC4.71□□□□□ -1.66
Ccdc28bQ8CEG5 Gm13528-201ENSMUST00000139288 410 ntTSL 2 BASIC4.71□□□□□ -1.66
Ccdc28bQ8CEG5 Mrgprb9-ps-201ENSMUST00000188739 892 ntBASIC4.71□□□□□ -1.66
Ccdc28bQ8CEG5 Gm7721-201ENSMUST00000200446 546 ntBASIC4.71□□□□□ -1.66
Ccdc28bQ8CEG5 C430039J01Rik-201ENSMUST00000205973 957 ntBASIC4.71□□□□□ -1.66
Ccdc28bQ8CEG5 4930405J17Rik-201ENSMUST00000214323 620 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Ccdc28bQ8CEG5 Gm21089-201ENSMUST00000215843 325 ntBASIC4.71□□□□□ -1.66
Ccdc28bQ8CEG5 AC126439.1-201ENSMUST00000226772 2104 ntBASIC4.71□□□□□ -1.66
Ccdc28bQ8CEG5 Vmn1r39-202ENSMUST00000226783 918 ntAPPRIS P2 BASIC4.71□□□□□ -1.66
Ccdc28bQ8CEG5 Hypm-201ENSMUST00000044987 581 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Ccdc28bQ8CEG5 Olfr209-201ENSMUST00000055868 918 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Ccdc28bQ8CEG5 Olfr803-201ENSMUST00000056736 927 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Ccdc28bQ8CEG5 Olfr911-ps1-201ENSMUST00000074987 940 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Ccdc28bQ8CEG5 Olfr884-201ENSMUST00000077732 930 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Ccdc28bQ8CEG5 Fam24a-201ENSMUST00000084505 371 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Ccdc28bQ8CEG5 Gm25099-201ENSMUST00000093716 116 ntBASIC4.71□□□□□ -1.66
Ccdc28bQ8CEG5 Kynu-202ENSMUST00000050511 2778 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Ccdc28bQ8CEG5 Olfr780-202ENSMUST00000215503 2910 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Ccdc28bQ8CEG5 Psg20-201ENSMUST00000076677 1428 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
Ccdc28bQ8CEG5 5330434G04Rik-202ENSMUST00000136406 3545 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Ccdc28bQ8CEG5 Gm830-201ENSMUST00000142458 3502 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Ccdc28bQ8CEG5 Fbxw28-204ENSMUST00000200156 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
Ccdc28bQ8CEG5 Dnah7c-204ENSMUST00000189749 12207 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Ccdc28bQ8CEG5 Gm28969-205ENSMUST00000186757 1581 ntTSL 5 BASIC4.7□□□□□ -1.66
Ccdc28bQ8CEG5 Gm28990-204ENSMUST00000189255 1581 ntTSL 5 BASIC4.7□□□□□ -1.66
Ccdc28bQ8CEG5 Gm28677-209ENSMUST00000190010 1581 ntTSL 5 BASIC4.7□□□□□ -1.66
Ccdc28bQ8CEG5 Olfr491-202ENSMUST00000209545 1944 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Ccdc28bQ8CEG5 Gm37690-202ENSMUST00000192684 1497 ntTSL 5 BASIC4.7□□□□□ -1.66
Ccdc28bQ8CEG5 Fgf7-202ENSMUST00000110442 2287 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Ccdc28bQ8CEG5 Olfr59-201ENSMUST00000143976 3088 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
Ccdc28bQ8CEG5 Gm44567-201ENSMUST00000205645 2631 ntBASIC4.7□□□□□ -1.66
Ccdc28bQ8CEG5 Cldn34b4-201ENSMUST00000101419 1103 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Ccdc28bQ8CEG5 Gm25419-201ENSMUST00000104215 191 ntBASIC4.7□□□□□ -1.66
Ccdc28bQ8CEG5 Olfr328-202ENSMUST00000108824 1199 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
Ccdc28bQ8CEG5 Gm11032-201ENSMUST00000109941 102 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Ccdc28bQ8CEG5 Gm14304-201ENSMUST00000117272 446 ntBASIC4.7□□□□□ -1.66
Ccdc28bQ8CEG5 Gm11877-201ENSMUST00000118921 852 ntBASIC4.7□□□□□ -1.66
Ccdc28bQ8CEG5 Gm16179-201ENSMUST00000120685 373 ntBASIC4.7□□□□□ -1.66
Ccdc28bQ8CEG5 Gm25047-201ENSMUST00000122667 104 ntBASIC4.7□□□□□ -1.66
Ccdc28bQ8CEG5 Gm25806-201ENSMUST00000122782 122 ntBASIC4.7□□□□□ -1.66
Ccdc28bQ8CEG5 Gm12082-201ENSMUST00000138164 600 ntTSL 3 BASIC4.7□□□□□ -1.66
Ccdc28bQ8CEG5 Gm14102-201ENSMUST00000147678 464 ntTSL 2 BASIC4.7□□□□□ -1.66
Ccdc28bQ8CEG5 Gm16096-202ENSMUST00000149386 819 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Ccdc28bQ8CEG5 Gm13062-201ENSMUST00000151337 562 ntTSL 3 BASIC4.7□□□□□ -1.66
Ccdc28bQ8CEG5 Mir1970-201ENSMUST00000157839 104 ntBASIC4.7□□□□□ -1.66
Ccdc28bQ8CEG5 Gm26086-201ENSMUST00000157902 263 ntBASIC4.7□□□□□ -1.66
Ccdc28bQ8CEG5 Gm26355-201ENSMUST00000158220 105 ntBASIC4.7□□□□□ -1.66
Ccdc28bQ8CEG5 Runx2os3-201ENSMUST00000160203 738 ntTSL 3 BASIC4.7□□□□□ -1.66
Ccdc28bQ8CEG5 0610040B10Rik-201ENSMUST00000160231 501 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Ccdc28bQ8CEG5 4933417A18Rik-201ENSMUST00000160279 1045 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Ccdc28bQ8CEG5 Gm6055-201ENSMUST00000180532 378 ntBASIC4.7□□□□□ -1.66
Ccdc28bQ8CEG5 Mir6416-201ENSMUST00000183664 117 ntBASIC4.7□□□□□ -1.66
Ccdc28bQ8CEG5 Gm28967-201ENSMUST00000187351 281 ntBASIC4.7□□□□□ -1.66
Ccdc28bQ8CEG5 Gm29186-201ENSMUST00000189178 660 ntTSL 2 BASIC4.7□□□□□ -1.66
Ccdc28bQ8CEG5 1700074H08Rik-201ENSMUST00000189831 555 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Ccdc28bQ8CEG5 Gm28996-201ENSMUST00000190316 721 ntBASIC4.7□□□□□ -1.66
Ccdc28bQ8CEG5 Gm37884-201ENSMUST00000191857 818 ntBASIC4.7□□□□□ -1.66
Ccdc28bQ8CEG5 Gm42619-201ENSMUST00000197564 1136 ntBASIC4.7□□□□□ -1.66
Ccdc28bQ8CEG5 Gm43501-201ENSMUST00000202513 107 ntBASIC4.7□□□□□ -1.66
Ccdc28bQ8CEG5 Gm43028-201ENSMUST00000202561 481 ntBASIC4.7□□□□□ -1.66
Ccdc28bQ8CEG5 Gm19617-201ENSMUST00000202977 308 ntBASIC4.7□□□□□ -1.66
Ccdc28bQ8CEG5 Gm4763-202ENSMUST00000205376 807 ntTSL 3 BASIC4.7□□□□□ -1.66
Ccdc28bQ8CEG5 Olfr181-203ENSMUST00000205742 1104 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Ccdc28bQ8CEG5 Snhg1-211ENSMUST00000206155 605 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Ccdc28bQ8CEG5 AC112956.1-201ENSMUST00000213563 492 ntBASIC4.7□□□□□ -1.66
Ccdc28bQ8CEG5 AC140409.4-201ENSMUST00000215757 538 ntBASIC4.7□□□□□ -1.66
Ccdc28bQ8CEG5 4930401A07Rik-202ENSMUST00000216155 360 ntTSL 2 BASIC4.7□□□□□ -1.66
Ccdc28bQ8CEG5 AC160413.1-201ENSMUST00000217909 932 ntTSL 5 BASIC4.7□□□□□ -1.66
Ccdc28bQ8CEG5 Olfr151-202ENSMUST00000221099 929 ntBASIC4.7□□□□□ -1.66
Ccdc28bQ8CEG5 Gm7240-202ENSMUST00000221961 353 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Ccdc28bQ8CEG5 AC135377.1-201ENSMUST00000223692 463 ntBASIC4.7□□□□□ -1.66
Ccdc28bQ8CEG5 AC122034.1-201ENSMUST00000227641 595 ntBASIC4.7□□□□□ -1.66
Ccdc28bQ8CEG5 Rnase12-202ENSMUST00000227764 673 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Ccdc28bQ8CEG5 Vmn1r33-201ENSMUST00000079678 1036 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Ccdc28bQ8CEG5 Gm24166-201ENSMUST00000082724 135 ntBASIC4.7□□□□□ -1.66
Ccdc28bQ8CEG5 Gm23972-201ENSMUST00000083322 165 ntBASIC4.7□□□□□ -1.66
Ccdc28bQ8CEG5 n-R5s182-201ENSMUST00000083889 107 ntBASIC4.7□□□□□ -1.66
Ccdc28bQ8CEG5 Rnase12-201ENSMUST00000089798 545 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Ccdc28bQ8CEG5 Gm14305-202ENSMUST00000108981 1646 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
Ccdc28bQ8CEG5 Olfr1283-202ENSMUST00000204064 1625 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Ccdc28bQ8CEG5 Zfp808-201ENSMUST00000099449 2571 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Ccdc28bQ8CEG5 Gm37749-201ENSMUST00000193917 1899 ntBASIC4.7□□□□□ -1.66
Ccdc28bQ8CEG5 Ctsj-202ENSMUST00000224224 1421 ntAPPRIS ALT2 BASIC4.7□□□□□ -1.66
Ccdc28bQ8CEG5 Fscb-201ENSMUST00000059833 3361 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Ccdc28bQ8CEG5 C430019N01Rik-201ENSMUST00000199517 1567 ntBASIC4.7□□□□□ -1.66
Ccdc28bQ8CEG5 Olfr646-202ENSMUST00000214099 3778 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 87.5 ms