Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 AC154527.3-201ENSMUST00000225519 989 ntBASIC5.64□□□□□ -1.51
Nup88Q8CEC0 CT030662.2-201ENSMUST00000226942 805 ntBASIC5.64□□□□□ -1.51
Nup88Q8CEC0 BC028528-201ENSMUST00000036360 752 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Nup88Q8CEC0 Pglyrp3-201ENSMUST00000047660 1107 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Nup88Q8CEC0 5430401F13Rik-201ENSMUST00000075020 602 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Nup88Q8CEC0 Gm43654-201ENSMUST00000200664 3417 ntBASIC5.64□□□□□ -1.51
Nup88Q8CEC0 Gm5591-201ENSMUST00000079759 3441 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Nup88Q8CEC0 2700099C18Rik-204ENSMUST00000183133 1333 ntBASIC5.64□□□□□ -1.51
Nup88Q8CEC0 Rnf213-202ENSMUST00000131035 16716 ntAPPRIS P5 TSL 5 BASIC5.64□□□□□ -1.51
Nup88Q8CEC0 Rnf213-201ENSMUST00000093902 16716 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
Nup88Q8CEC0 Brip1-201ENSMUST00000044423 6931 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Nup88Q8CEC0 Olfr481-202ENSMUST00000213601 5247 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Nup88Q8CEC0 Olfr1140-201ENSMUST00000214723 1421 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Nup88Q8CEC0 Adam24-201ENSMUST00000051614 2887 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Nup88Q8CEC0 Olfr495-202ENSMUST00000215215 2460 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Nup88Q8CEC0 Mndal-204ENSMUST00000188804 2026 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Nup88Q8CEC0 Gm10727-201ENSMUST00000197107 1602 ntBASIC5.63□□□□□ -1.51
Nup88Q8CEC0 Gm45644-201ENSMUST00000210255 2740 ntBASIC5.63□□□□□ -1.51
Nup88Q8CEC0 Gm15592-201ENSMUST00000143135 1707 ntTSL 3 BASIC5.63□□□□□ -1.51
Nup88Q8CEC0 Gm42910-201ENSMUST00000198917 2921 ntBASIC5.63□□□□□ -1.51
Nup88Q8CEC0 Gm22657-201ENSMUST00000104197 132 ntBASIC5.63□□□□□ -1.51
Nup88Q8CEC0 Gm26143-201ENSMUST00000104480 108 ntBASIC5.63□□□□□ -1.51
Nup88Q8CEC0 Smim8-202ENSMUST00000108131 892 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
Nup88Q8CEC0 Gm5133-201ENSMUST00000118940 1255 ntBASIC5.63□□□□□ -1.51
Nup88Q8CEC0 Gm12082-201ENSMUST00000138164 600 ntTSL 3 BASIC5.63□□□□□ -1.51
Nup88Q8CEC0 AI662270-201ENSMUST00000142709 304 ntTSL 2 BASIC5.63□□□□□ -1.51
Nup88Q8CEC0 Gm23121-201ENSMUST00000157653 173 ntBASIC5.63□□□□□ -1.51
Nup88Q8CEC0 Gm16213-201ENSMUST00000160076 639 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Nup88Q8CEC0 Olfr762-ps1-201ENSMUST00000172948 927 ntBASIC5.63□□□□□ -1.51
Nup88Q8CEC0 9130024F11Rik-203ENSMUST00000187858 447 ntTSL 2 BASIC5.63□□□□□ -1.51
Nup88Q8CEC0 Gm28957-201ENSMUST00000190174 373 ntBASIC5.63□□□□□ -1.51
Nup88Q8CEC0 4930590L20Rik-201ENSMUST00000193820 553 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Nup88Q8CEC0 Gm37815-201ENSMUST00000195665 411 ntTSL 5 BASIC5.63□□□□□ -1.51
Nup88Q8CEC0 AC136146.1-201ENSMUST00000196180 91 ntBASIC5.63□□□□□ -1.51
Nup88Q8CEC0 Gm32308-201ENSMUST00000203053 280 ntBASIC5.63□□□□□ -1.51
Nup88Q8CEC0 Gm45261-201ENSMUST00000211023 594 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Nup88Q8CEC0 Olfr858-ps1-201ENSMUST00000212591 930 ntBASIC5.63□□□□□ -1.51
Nup88Q8CEC0 AC142273.1-201ENSMUST00000213723 673 ntBASIC5.63□□□□□ -1.51
Nup88Q8CEC0 Gm8911-201ENSMUST00000213986 652 ntBASIC5.63□□□□□ -1.51
Nup88Q8CEC0 4930401A07Rik-202ENSMUST00000216155 360 ntTSL 2 BASIC5.63□□□□□ -1.51
Nup88Q8CEC0 Gm35326-201ENSMUST00000218234 1041 ntTSL 5 BASIC5.63□□□□□ -1.51
Nup88Q8CEC0 AC123534.1-201ENSMUST00000224060 656 ntBASIC5.63□□□□□ -1.51
Nup88Q8CEC0 Olfr509-201ENSMUST00000061690 1075 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Nup88Q8CEC0 Gm16415-201ENSMUST00000080097 489 ntBASIC5.63□□□□□ -1.51
Nup88Q8CEC0 Olfr1505-201ENSMUST00000081520 1103 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Nup88Q8CEC0 Zfp329-201ENSMUST00000072222 6727 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Nup88Q8CEC0 Adam7-201ENSMUST00000022640 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Nup88Q8CEC0 Olfr1034-201ENSMUST00000213496 4882 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Nup88Q8CEC0 Pate2-202ENSMUST00000118254 2215 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Nup88Q8CEC0 Vmn1r214-202ENSMUST00000227236 3892 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Nup88Q8CEC0 Gm3985-201ENSMUST00000132101 2515 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Nup88Q8CEC0 C130079G13Rik-201ENSMUST00000049476 2789 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Nup88Q8CEC0 Lair1-201ENSMUST00000068865 6828 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Nup88Q8CEC0 Apob-202ENSMUST00000037811 13934 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Nup88Q8CEC0 Enpp3-201ENSMUST00000020169 4253 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Nup88Q8CEC0 Gm38020-201ENSMUST00000193066 4676 ntBASIC5.62□□□□□ -1.51
Nup88Q8CEC0 Trac-201ENSMUST00000103740 413 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Nup88Q8CEC0 Iglv2-201ENSMUST00000103752 348 ntAPPRIS ALT2 BASIC5.62□□□□□ -1.51
Nup88Q8CEC0 Gm14876-201ENSMUST00000120795 327 ntBASIC5.62□□□□□ -1.51
Nup88Q8CEC0 Gm7840-201ENSMUST00000122086 533 ntBASIC5.62□□□□□ -1.51
Nup88Q8CEC0 Gm25103-201ENSMUST00000122671 318 ntBASIC5.62□□□□□ -1.51
Nup88Q8CEC0 A230083N12Rik-201ENSMUST00000126646 572 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Nup88Q8CEC0 4930547E08Rik-201ENSMUST00000143559 541 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Nup88Q8CEC0 1700061H18Rik-202ENSMUST00000147221 564 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Nup88Q8CEC0 Gm13173-201ENSMUST00000151703 441 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Nup88Q8CEC0 Mir1947-201ENSMUST00000158235 85 ntBASIC5.62□□□□□ -1.51
Nup88Q8CEC0 Gm24931-201ENSMUST00000158324 107 ntBASIC5.62□□□□□ -1.51
Nup88Q8CEC0 Gm6647-201ENSMUST00000170514 641 ntBASIC5.62□□□□□ -1.51
Nup88Q8CEC0 Tex50-202ENSMUST00000178511 954 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
Nup88Q8CEC0 Cox6b2-202ENSMUST00000182048 465 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Nup88Q8CEC0 Gm26962-201ENSMUST00000182545 265 ntTSL 3 BASIC5.62□□□□□ -1.51
Nup88Q8CEC0 Gm26950-201ENSMUST00000182734 498 ntBASIC5.62□□□□□ -1.51
Nup88Q8CEC0 Gm27636-201ENSMUST00000184528 122 ntBASIC5.62□□□□□ -1.51
Nup88Q8CEC0 Gm27387-201ENSMUST00000184583 116 ntBASIC5.62□□□□□ -1.51
Nup88Q8CEC0 4930540E01Rik-201ENSMUST00000192569 1146 ntBASIC5.62□□□□□ -1.51
Nup88Q8CEC0 Gm37908-201ENSMUST00000195828 470 ntBASIC5.62□□□□□ -1.51
Nup88Q8CEC0 Gm43765-201ENSMUST00000196303 893 ntBASIC5.62□□□□□ -1.51
Nup88Q8CEC0 Gm20586-201ENSMUST00000210122 547 ntBASIC5.62□□□□□ -1.51
Nup88Q8CEC0 Olfr856-ps1-201ENSMUST00000212177 948 ntBASIC5.62□□□□□ -1.51
Nup88Q8CEC0 AC122508.1-201ENSMUST00000218365 233 ntTSL 5 BASIC5.62□□□□□ -1.51
Nup88Q8CEC0 AC109180.1-201ENSMUST00000218676 398 ntBASIC5.62□□□□□ -1.51
Nup88Q8CEC0 AC164618.1-201ENSMUST00000225769 592 ntBASIC5.62□□□□□ -1.51
Nup88Q8CEC0 AC133910.1-201ENSMUST00000228128 624 ntBASIC5.62□□□□□ -1.51
Nup88Q8CEC0 Cst9-201ENSMUST00000028935 687 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Nup88Q8CEC0 Spata19-201ENSMUST00000034473 697 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Nup88Q8CEC0 Gm14296-201ENSMUST00000099007 3823 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Nup88Q8CEC0 2210418O10Rik-201ENSMUST00000099009 3823 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Nup88Q8CEC0 Olfr1277-201ENSMUST00000099619 962 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Nup88Q8CEC0 Olfr726-205ENSMUST00000215278 1324 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
Nup88Q8CEC0 Vmn2r-ps82-201ENSMUST00000174222 1641 ntBASIC5.62□□□□□ -1.51
Nup88Q8CEC0 Nme7-202ENSMUST00000191947 1635 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Nup88Q8CEC0 Gm3675-201ENSMUST00000175904 1653 ntBASIC5.62□□□□□ -1.51
Nup88Q8CEC0 Clec2e-201ENSMUST00000032258 2099 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Nup88Q8CEC0 Mrgprb2-201ENSMUST00000052730 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Nup88Q8CEC0 Cnot2-213ENSMUST00000169921 2120 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Nup88Q8CEC0 Vmn2r116-201ENSMUST00000164856 2571 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Nup88Q8CEC0 Gm42494-201ENSMUST00000196515 3051 ntBASIC5.61□□□□□ -1.51
Nup88Q8CEC0 Vmn1r217-203ENSMUST00000228656 9767 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Nup88Q8CEC0 Slco1a1-201ENSMUST00000042119 3395 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Nup88Q8CEC0 Gpr141-201ENSMUST00000065335 3433 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 87.4 ms