Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm38125-201ENSMUST00000194136 3438 ntBASIC5.11□□□□□ -1.59
Ccdc40Q8BI79 Olfr1123-203ENSMUST00000216208 5245 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
Ccdc40Q8BI79 Trappc13-205ENSMUST00000144060 3538 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Ccdc40Q8BI79 Sycp2-201ENSMUST00000081134 5717 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Ccdc40Q8BI79 Vmn1r214-203ENSMUST00000227652 3906 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Ccdc40Q8BI79 Gm13582-201ENSMUST00000146034 2655 ntTSL 2 BASIC5.1□□□□□ -1.59
Ccdc40Q8BI79 Vmn1r58-201ENSMUST00000108569 10140 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Ccdc40Q8BI79 Cdh10-201ENSMUST00000040562 3407 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Ccdc40Q8BI79 Neat1-201ENSMUST00000173672 20771 ntBASIC5.1□□□□□ -1.59
Ccdc40Q8BI79 Gm12887-201ENSMUST00000106265 360 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Ccdc40Q8BI79 Gm8202-201ENSMUST00000117682 310 ntBASIC5.1□□□□□ -1.59
Ccdc40Q8BI79 Gm12717-201ENSMUST00000118427 983 ntBASIC5.1□□□□□ -1.59
Ccdc40Q8BI79 Gm13537-201ENSMUST00000120467 267 ntBASIC5.1□□□□□ -1.59
Ccdc40Q8BI79 Gm15537-201ENSMUST00000126677 485 ntTSL 2 BASIC5.1□□□□□ -1.59
Ccdc40Q8BI79 Gm12249-201ENSMUST00000132323 719 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Ccdc40Q8BI79 Gm16332-201ENSMUST00000134229 2967 ntBASIC5.1□□□□□ -1.59
Ccdc40Q8BI79 Gm11234-201ENSMUST00000141030 845 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Ccdc40Q8BI79 1700061J23Rik-201ENSMUST00000141678 537 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Ccdc40Q8BI79 Pax6os1-202ENSMUST00000149133 1464 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Ccdc40Q8BI79 4930563I02Rik-202ENSMUST00000154835 971 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Ccdc40Q8BI79 Gm26371-201ENSMUST00000157829 104 ntBASIC5.1□□□□□ -1.59
Ccdc40Q8BI79 Gm23318-201ENSMUST00000158000 108 ntBASIC5.1□□□□□ -1.59
Ccdc40Q8BI79 Gm3307-201ENSMUST00000176164 632 ntBASIC5.1□□□□□ -1.59
Ccdc40Q8BI79 Gm28017-201ENSMUST00000183434 126 ntBASIC5.1□□□□□ -1.59
Ccdc40Q8BI79 Gm19427-201ENSMUST00000183619 208 ntBASIC5.1□□□□□ -1.59
Ccdc40Q8BI79 Gm27864-201ENSMUST00000183704 190 ntBASIC5.1□□□□□ -1.59
Ccdc40Q8BI79 Mir7674-201ENSMUST00000184964 63 ntBASIC5.1□□□□□ -1.59
Ccdc40Q8BI79 Zfp976-203ENSMUST00000187616 1908 ntTSL 5 BASIC5.1□□□□□ -1.59
Ccdc40Q8BI79 AL645522.1-201ENSMUST00000197692 104 ntBASIC5.1□□□□□ -1.59
Ccdc40Q8BI79 Gm42869-201ENSMUST00000199953 2121 ntBASIC5.1□□□□□ -1.59
Ccdc40Q8BI79 Olfr494-202ENSMUST00000210291 947 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Ccdc40Q8BI79 4932411K12Rik-203ENSMUST00000210384 1351 ntTSL 5 BASIC5.1□□□□□ -1.59
Ccdc40Q8BI79 Zscan4-ps3-201ENSMUST00000210559 2277 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Ccdc40Q8BI79 Ankar-202ENSMUST00000211837 4543 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
Ccdc40Q8BI79 Olfr123-203ENSMUST00000216051 2716 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Ccdc40Q8BI79 1700025K04Rik-201ENSMUST00000218075 1174 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Ccdc40Q8BI79 Gm18871-201ENSMUST00000218655 745 ntBASIC5.1□□□□□ -1.59
Ccdc40Q8BI79 AC153532.3-201ENSMUST00000218660 3848 ntBASIC5.1□□□□□ -1.59
Ccdc40Q8BI79 Gm30262-201ENSMUST00000219137 791 ntTSL 5 BASIC5.1□□□□□ -1.59
Ccdc40Q8BI79 4930480M12Rik-201ENSMUST00000221084 550 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Ccdc40Q8BI79 Gm9269-201ENSMUST00000221661 578 ntBASIC5.1□□□□□ -1.59
Ccdc40Q8BI79 AC124687.2-201ENSMUST00000221927 1228 ntTSL 5 BASIC5.1□□□□□ -1.59
Ccdc40Q8BI79 Gm6474-201ENSMUST00000223250 699 ntBASIC5.1□□□□□ -1.59
Ccdc40Q8BI79 AC165283.1-201ENSMUST00000223390 307 ntBASIC5.1□□□□□ -1.59
Ccdc40Q8BI79 AC164315.1-201ENSMUST00000226452 708 ntBASIC5.1□□□□□ -1.59
Ccdc40Q8BI79 CT009600.2-201ENSMUST00000226638 481 ntBASIC5.1□□□□□ -1.59
Ccdc40Q8BI79 AC154806.4-201ENSMUST00000227406 439 ntBASIC5.1□□□□□ -1.59
Ccdc40Q8BI79 AC192088.3-201ENSMUST00000227858 831 ntBASIC5.1□□□□□ -1.59
Ccdc40Q8BI79 AC161269.1-201ENSMUST00000228426 318 ntBASIC5.1□□□□□ -1.59
Ccdc40Q8BI79 Rapgef4-201ENSMUST00000028525 4109 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Ccdc40Q8BI79 Pof1b-201ENSMUST00000039887 3886 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Ccdc40Q8BI79 Cox6b2-201ENSMUST00000063324 553 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Ccdc40Q8BI79 Gm25187-201ENSMUST00000083906 133 ntBASIC5.1□□□□□ -1.59
Ccdc40Q8BI79 Olfr1472-202ENSMUST00000096201 1377 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Ccdc40Q8BI79 Olfr1066-201ENSMUST00000099885 942 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Ccdc40Q8BI79 Slc5a12-201ENSMUST00000045972 3529 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Ccdc40Q8BI79 Olfr884-202ENSMUST00000181088 3185 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
Ccdc40Q8BI79 Vmn1r5-203ENSMUST00000228276 3188 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Ccdc40Q8BI79 Olfr1290-204ENSMUST00000217611 2729 ntAPPRIS P1 TSL 3 BASIC5.1□□□□□ -1.59
Ccdc40Q8BI79 Gm6367-201ENSMUST00000178646 2464 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Ccdc40Q8BI79 Olfr870-202ENSMUST00000215984 4091 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Ccdc40Q8BI79 Olfr1034-201ENSMUST00000213496 4882 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Ccdc40Q8BI79 Olfr1131-203ENSMUST00000216756 1459 ntTSL 3 BASIC5.09□□□□□ -1.59
Ccdc40Q8BI79 Olfr536-205ENSMUST00000215768 4231 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Ccdc40Q8BI79 4933439N06Rik-201ENSMUST00000203062 1365 ntBASIC5.09□□□□□ -1.59
Ccdc40Q8BI79 Gm8369-201ENSMUST00000079855 1374 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Ccdc40Q8BI79 Gm11020-201ENSMUST00000109447 186 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Ccdc40Q8BI79 Gm11631-201ENSMUST00000119220 156 ntBASIC5.09□□□□□ -1.59
Ccdc40Q8BI79 Smt3h2-ps-201ENSMUST00000121084 285 ntBASIC5.09□□□□□ -1.59
Ccdc40Q8BI79 Gm15017-201ENSMUST00000141989 632 ntTSL 5 BASIC5.09□□□□□ -1.59
Ccdc40Q8BI79 Gm11197-201ENSMUST00000145158 839 ntBASIC5.09□□□□□ -1.59
Ccdc40Q8BI79 Gm11846-201ENSMUST00000155156 515 ntTSL 2 BASIC5.09□□□□□ -1.59
Ccdc40Q8BI79 Gm25389-201ENSMUST00000157340 286 ntBASIC5.09□□□□□ -1.59
Ccdc40Q8BI79 Gm15810-201ENSMUST00000160241 681 ntTSL 3 BASIC5.09□□□□□ -1.59
Ccdc40Q8BI79 Gm15657-203ENSMUST00000163077 779 ntTSL 3 BASIC5.09□□□□□ -1.59
Ccdc40Q8BI79 Gm3030-201ENSMUST00000163410 516 ntBASIC5.09□□□□□ -1.59
Ccdc40Q8BI79 Gm3339-201ENSMUST00000163462 475 ntBASIC5.09□□□□□ -1.59
Ccdc40Q8BI79 Gm17103-201ENSMUST00000168897 549 ntTSL 3 BASIC5.09□□□□□ -1.59
Ccdc40Q8BI79 Gm8265-201ENSMUST00000170469 475 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Ccdc40Q8BI79 Svs4-201ENSMUST00000017142 731 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Ccdc40Q8BI79 Vmn1r-ps143-201ENSMUST00000176730 604 ntBASIC5.09□□□□□ -1.59
Ccdc40Q8BI79 Gm27255-201ENSMUST00000184303 529 ntTSL 3 BASIC5.09□□□□□ -1.59
Ccdc40Q8BI79 Gm29610-201ENSMUST00000187749 453 ntBASIC5.09□□□□□ -1.59
Ccdc40Q8BI79 Mrgprb9-ps-201ENSMUST00000188739 892 ntBASIC5.09□□□□□ -1.59
Ccdc40Q8BI79 Gm38180-201ENSMUST00000192381 395 ntTSL 5 BASIC5.09□□□□□ -1.59
Ccdc40Q8BI79 Gm42437-201ENSMUST00000197263 923 ntBASIC5.09□□□□□ -1.59
Ccdc40Q8BI79 Traj59-202ENSMUST00000197589 62 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Ccdc40Q8BI79 Gm20559-201ENSMUST00000201032 433 ntTSL 3 BASIC5.09□□□□□ -1.59
Ccdc40Q8BI79 Gm19617-201ENSMUST00000202977 308 ntBASIC5.09□□□□□ -1.59
Ccdc40Q8BI79 Gm43945-201ENSMUST00000203595 754 ntBASIC5.09□□□□□ -1.59
Ccdc40Q8BI79 Klrb1b-204ENSMUST00000205130 917 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
Ccdc40Q8BI79 Znrd1as-204ENSMUST00000209623 1218 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
Ccdc40Q8BI79 Gm45660-201ENSMUST00000210267 151 ntBASIC5.09□□□□□ -1.59
Ccdc40Q8BI79 Gm45574-201ENSMUST00000210921 331 ntBASIC5.09□□□□□ -1.59
Ccdc40Q8BI79 2310002D06Rik-201ENSMUST00000218103 508 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Ccdc40Q8BI79 AC153553.1-201ENSMUST00000218257 684 ntBASIC5.09□□□□□ -1.59
Ccdc40Q8BI79 Rpl29-ps2-202ENSMUST00000220540 1165 ntTSL 5 BASIC5.09□□□□□ -1.59
Ccdc40Q8BI79 Olfr469-201ENSMUST00000075704 945 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Ccdc40Q8BI79 Olfr1061-201ENSMUST00000099889 942 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Ccdc40Q8BI79 AC112142.1-203ENSMUST00000228670 2472 ntBASIC5.09□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 75.2 ms